[med-svn] [Git][med-team/spades][master] 5 commits: Lets check whether new upstream builds properly

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / spades


Commits:
534b20aa by Andreas Tille at 2021-01-15T10:08:47+01:00
Lets check whether new upstream builds properly

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2568feac by Andreas Tille at 2021-01-15T10:10:08+01:00
routine-update: New upstream version

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ae7e3af4 by Andreas Tille at 2021-01-15T10:10:09+01:00
New upstream version 3.15.0+dfsg
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89e67fe2 by Andreas Tille at 2021-01-15T10:10:30+01:00
Update upstream source from tag 'upstream/3.15.0+dfsg'

Update to upstream version '3.15.0+dfsg'
with Debian dir f29859b2a19538cd0199c99b6a42c5ce703ec70d
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3495b09f by Andreas Tille at 2021-01-15T11:19:03+01:00
Update patches

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30 changed files:

- − .github/workflows/basic.yml
- + .github/workflows/basic.yml.disabled
- − .github/workflows/spades-test.yml
- + .github/workflows/spades-test.yml.disabled
- .gitignore
- README.md
- assembler/LICENSE
- assembler/VERSION
- assembler/biosynthetic_spades_hmms/AMP.hmm.gz
- assembler/biosynthetic_spades_hmms/AT.hmm.gz
- assembler/biosynthetic_spades_hmms/CStart.hmm.gz
- assembler/biosynthetic_spades_hmms/KR.hmm.gz
- assembler/biosynthetic_spades_hmms/KS.hmm.gz
- assembler/biosynthetic_spades_hmms/TE.hmm.gz
- assembler/changelog.html
- − assembler/configs/cclean/config.info
- − assembler/configs/debruijn/bgc_mode.info
- assembler/configs/debruijn/config.info
- + assembler/configs/debruijn/hmm_mode.info
- assembler/configs/debruijn/meta_mode.info
- + assembler/configs/debruijn/metaplasmid_mode.info
- + assembler/configs/debruijn/metaviral_mode.info
- assembler/configs/debruijn/plasmid_mode.info
- + assembler/configs/debruijn/rnaviral_mode.info
- assembler/configs/debruijn/simplification.info
- + assembler/coronaspades.py
- + assembler/coronaspades_hmms/Pfam-A.SARS-CoV-2.hmm.gz
- + assembler/coronaspades_hmms/Phan-CoV.hmm.gz
- − assembler/ext/eclipse/gsgc.xml
- assembler/ext/include/boomphf/BooPHF.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/spades/-/compare/bc730956ec1c4f874b7a940798a9c8cb98591938...3495b09fcd3064d0a74023078376f051bda9dff4

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View it on GitLab: https://salsa.debian.org/med-team/spades/-/compare/bc730956ec1c4f874b7a940798a9c8cb98591938...3495b09fcd3064d0a74023078376f051bda9dff4
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