Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
45f3c25c by Andreas Tille at 2021-01-15T13:46:15+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,27 +1,27 @@
-Last-Update: Fri, 15 Jan 2021 01:42:04 +0000
+Last-Update: Fri, 15 Jan 2021 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 188 | {imaging,covid-19} |
+ dcmtk | 184 | {imaging,covid-19} |
orthanc | 101 | {covid-19,imaging,practice} |
orthanc-wsi | 54 | {imaging,his,laboratory,oncology,covid-19,practice} |
gdcm | 37 | {imaging-dev} |
- amide | 32 | {imaging} |
+ amide | 31 | {imaging} |
dicom3tools | 31 | {imaging} |
dicomscope | 30 | {imaging} |
htsjdk | 23 | {bio-dev} |
- dcm2niix | 18 | {imaging} |
- nifticlib | 18 | {imaging} |
+ nifticlib | 20 | {imaging} |
+ dcm2niix | 19 | {imaging} |
gdcm | 17 | {imaging-dev} |
- gnumed-server | 17 | {covid-19,practice} |
invesalius | 17 | {imaging} |
gdcm | 16 | {covid-19,imaging} |
+ gnumed-server | 16 | {covid-19,practice} |
odin | 16 | {imaging,imaging-dev} |
dicomnifti | 15 | {imaging} |
minc-tools | 14 | {imaging} |
- king | 12 | {imaging,typesetting} |
+ king | 13 | {imaging,typesetting} |
+ plastimatch | 13 | {imaging} |
pixelmed | 12 | {imaging} |
- plastimatch | 12 | {imaging} |
insighttoolkit4 | 11 | {imaging-dev} |
ngs-sdk | 11 | {bio-dev} |
biosig | 10 | {physics,imaging} |
@@ -36,20 +36,19 @@ Last-Update: Fri, 15 Jan 2021 01:42:04 +0000
melting | 7 | {cloud,bio} |
fastlink | 6 | {cloud,bio} |
nifti2dicom | 6 | {imaging} |
- obitools | 6 | {bio} |
bamkit | 5 | {covid-19,bio} |
bart-view | 5 | {imaging} |
biojava-live | 5 | {bio-dev} |
- ea-utils | 5 | {bio} |
ngs-sdk | 5 | {bio-dev} |
+ obitools | 5 | {bio} |
orthanc-dicomweb | 5 | {imaging,covid-19} |
orthanc-mysql | 5 | {imaging} |
orthanc-postgresql | 5 | {imaging} |
bio-tradis | 4 | {bio-dev,bio} |
dicompyler | 4 | {oncology} |
+ ea-utils | 4 | {bio} |
ipig | 4 | {bio} |
jebl2 | 4 | {bio-dev} |
- lagan | 4 | {bio} |
librg-utils-perl | 4 | {bio} |
multiqc | 4 | {covid-19,bio} |
prime-phylo | 4 | {bio,cloud} |
@@ -68,6 +67,7 @@ Last-Update: Fri, 15 Jan 2021 01:42:04 +0000
embassy-domsearch | 3 | {cloud,bio} |
getdata | 3 | {bio} |
jellyfish1 | 3 | {bio} |
+ lagan | 3 | {bio} |
libncl | 3 | {bio} |
librdp-taxonomy-tree-java | 3 | {bio-dev} |
libsbml | 3 | {bio-dev} |
@@ -94,7 +94,6 @@ Last-Update: Fri, 15 Jan 2021 01:42:04 +0000
clonalorigin | 2 | {bio} |
cufflinks | 2 | {cloud,bio} |
ecopcr | 2 | {bio} |
- ghmm | 2 | {bio} |
lamarc | 2 | {bio} |
libdivsufsort | 2 | {bio-dev} |
libmuscle | 2 | {bio-dev} |
@@ -103,14 +102,12 @@ Last-Update: Fri, 15 Jan 2021 01:42:04 +0000
perm | 2 | {cloud,bio} |
phybin | 2 | {bio} |
piler | 2 | {bio} |
- placnet | 2 | {bio} |
pscan-chip | 2 | {bio} |
quorum | 2 | {bio} |
samblaster | 2 | {bio,covid-19} |
sift | 2 | {bio} |
soapsnp | 2 | {bio} |
spaced | 2 | {bio} |
- stacks | 2 | {bio} |
staden | 2 | {bio} |
tracetuner | 2 | {bio} |
blasr | 1 | {bio-ngs,bio} |
@@ -123,6 +120,7 @@ Last-Update: Fri, 15 Jan 2021 01:42:04 +0000
fastml | 1 | {bio} |
fsm-lite | 1 | {bio} |
gatb-core | 1 | {bio} |
+ ghmm | 1 | {bio} |
gifticlib | 1 | {imaging-dev} |
hinge | 1 | {bio} |
jmodeltest | 1 | {bio-phylogeny,bio} |
@@ -136,7 +134,9 @@ Last-Update: Fri, 15 Jan 2021 01:42:04 +0000
opencfu | 1 | {laboratory} |
openslide | 1 | {imaging-dev} |
opensurgsim | 1 | {imaging-dev} |
+ oscar | 1 | {tools,practice,data} |
papyrus | 1 | {imaging-dev} |
+ placnet | 1 | {bio} |
plasmidid | 1 | {covid-19,bio} |
prottest | 1 | {bio,bio-phylogeny} |
qcumber | 1 | {bio} |
@@ -148,6 +148,7 @@ Last-Update: Fri, 15 Jan 2021 01:42:04 +0000
soapaligner | 1 | {bio} |
sprai | 1 | {bio} |
srf | 1 | {bio-dev} |
+ stacks | 1 | {bio} |
suitename | 1 | {bio} |
surankco | 1 | {bio} |
vienna-rna | 1 | {bio,covid-19} |
@@ -208,7 +209,6 @@ Last-Update: Fri, 15 Jan 2021 01:42:04 +0000
ncbi-vdb | 0 | {bio-dev} |
nifticlib | 0 | {imaging-dev} |
orthanc-imagej | 0 | {imaging} |
- oscar | 0 | {tools,practice,data} |
parallel-fastq-dump | 0 | {covid-19} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
@@ -218,8 +218,8 @@ Last-Update: Fri, 15 Jan 2021 01:42:04 +0000
plasmidseeker | 0 | {bio} |
pplacer | 0 | {bio-phylogeny,bio,covid-19} |
python-bcbio-gff | 0 | {bio-dev} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {bio-dev,covid-19} |
+ python-seqcluster | 0 | {bio} |
q2-sample-classifier | 0 | {bio-dev,bio} |
resfinder-db | 0 | {bio} |
sambamba | 0 | {bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/45f3c25c8b3318ac4250172f93a97fb567123c01
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/45f3c25c8b3318ac4250172f93a97fb567123c01
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