[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille gitlab at salsa.debian.org
Tue Jan 19 13:45:29 GMT 2021



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
3eddf095 by Andreas Tille at 2021-01-19T13:45:25+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,25 +1,25 @@
-Last-Update: Tue, 19 Jan 2021 01:42:04 +0000
+Last-Update: Tue, 19 Jan 2021 13:42:04 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    186 | {imaging,covid-19}                                  | 
- orthanc                       |    101 | {covid-19,imaging,practice}                         | 
- orthanc-wsi                   |     54 | {imaging,his,laboratory,oncology,covid-19,practice} | 
- gdcm                          |     37 | {imaging-dev}                                       | 
- amide                         |     31 | {imaging}                                           | 
- dicomscope                    |     30 | {imaging}                                           | 
+ dcmtk                         |    184 | {imaging,covid-19}                                  | 
+ orthanc                       |    100 | {covid-19,imaging,practice}                         | 
+ orthanc-wsi                   |     53 | {imaging,his,laboratory,oncology,covid-19,practice} | 
+ gdcm                          |     39 | {imaging-dev}                                       | 
+ amide                         |     29 | {imaging}                                           | 
+ dicomscope                    |     29 | {imaging}                                           | 
  dicom3tools                   |     27 | {imaging}                                           | 
  htsjdk                        |     25 | {bio-dev}                                           | 
- dcm2niix                      |     20 | {imaging}                                           | 
- nifticlib                     |     19 | {imaging}                                           | 
- gdcm                          |     16 | {imaging-dev}                                       | 
+ dcm2niix                      |     19 | {imaging}                                           | 
+ nifticlib                     |     18 | {imaging}                                           | 
  gdcm                          |     16 | {covid-19,imaging}                                  | 
  gnumed-server                 |     16 | {covid-19,practice}                                 | 
- invesalius                    |     15 | {imaging}                                           | 
+ gdcm                          |     15 | {imaging-dev}                                       | 
  odin                          |     15 | {imaging,imaging-dev}                               | 
- dicomnifti                    |     14 | {imaging}                                           | 
+ invesalius                    |     14 | {imaging}                                           | 
  ngs-sdk                       |     14 | {bio-dev}                                           | 
- minc-tools                    |     13 | {imaging}                                           | 
+ dicomnifti                    |     13 | {imaging}                                           | 
+ minc-tools                    |     12 | {imaging}                                           | 
  plastimatch                   |     12 | {imaging}                                           | 
  king                          |     11 | {imaging,typesetting}                               | 
  pixelmed                      |     11 | {imaging}                                           | 
@@ -35,12 +35,12 @@ Last-Update: Tue, 19 Jan 2021 01:42:04 +0000
  libminc                       |      7 | {imaging-dev}                                       | 
  nifti2dicom                   |      7 | {imaging}                                           | 
  biojava-live                  |      6 | {bio-dev}                                           | 
+ librg-utils-perl              |      6 | {bio}                                               | 
  ngs-sdk                       |      6 | {bio-dev}                                           | 
  bamkit                        |      5 | {covid-19,bio}                                      | 
  bart-view                     |      5 | {imaging}                                           | 
  bio-tradis                    |      5 | {bio-dev,bio}                                       | 
  jebl2                         |      5 | {bio-dev}                                           | 
- librg-utils-perl              |      5 | {bio}                                               | 
  libsbml                       |      5 | {bio-dev}                                           | 
  nifti2dicom                   |      5 | {imaging}                                           | 
  obitools                      |      5 | {bio}                                               | 
@@ -64,7 +64,6 @@ Last-Update: Tue, 19 Jan 2021 01:42:04 +0000
  librdp-taxonomy-tree-java     |      4 | {bio-dev}                                           | 
  mauve-aligner                 |      4 | {bio}                                               | 
  mipe                          |      4 | {cloud,bio}                                         | 
- multiqc                       |      4 | {covid-19,bio}                                      | 
  pbdagcon                      |      4 | {bio}                                               | 
  phast                         |      4 | {bio}                                               | 
  phyutility                    |      4 | {bio,cloud}                                         | 
@@ -90,6 +89,7 @@ Last-Update: Tue, 19 Jan 2021 01:42:04 +0000
  lagan                         |      3 | {bio}                                               | 
  lamarc                        |      3 | {bio}                                               | 
  libdivsufsort                 |      3 | {bio-dev}                                           | 
+ multiqc                       |      3 | {covid-19,bio}                                      | 
  nifticlib                     |      3 | {imaging-dev}                                       | 
  paraclu                       |      3 | {bio,cloud}                                         | 
  perm                          |      3 | {cloud,bio}                                         | 
@@ -175,7 +175,6 @@ Last-Update: Tue, 19 Jan 2021 01:42:04 +0000
  trace2dbest                   |      1 | {bio}                                               | 
  tvc                           |      1 | {bio}                                               | 
  varscan                       |      1 | {bio,covid-19}                                      | 
- vienna-rna                    |      1 | {bio,covid-19}                                      | 
  acedb                         |      0 | {bio,cloud}                                         | 
  atropos                       |      0 | {bio}                                               | 
  bbmap                         |      0 | {bio,covid-19}                                      | 
@@ -220,8 +219,8 @@ Last-Update: Tue, 19 Jan 2021 01:42:04 +0000
  pique                         |      0 | {bio}                                               | 
  pplacer                       |      0 | {bio-phylogeny,bio,covid-19}                        | 
  python-bcbio-gff              |      0 | {bio-dev}                                           | 
- python-seqcluster             |      0 | {bio}                                               | 
  python-seqcluster             |      0 | {bio-dev,covid-19}                                  | 
+ python-seqcluster             |      0 | {bio}                                               | 
  q2-sample-classifier          |      0 | {bio-dev,bio}                                       | 
  resfinder-db                  |      0 | {bio}                                               | 
  sambamba                      |      0 | {bio}                                               | 
@@ -238,6 +237,7 @@ Last-Update: Tue, 19 Jan 2021 01:42:04 +0000
  thesias                       |      0 | {covid-19,bio}                                      | 
  tophat-recondition            |      0 | {bio,covid-19}                                      | 
  varna                         |      0 | {bio}                                               | 
+ vienna-rna                    |      0 | {bio,covid-19}                                      | 
  vtk-dicom                     |      0 | {imaging-dev}                                       | 
  xdffileio                     |      0 | {imaging-dev}                                       | 
  yanagiba                      |      0 | {covid-19,bio}                                      | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/3eddf09554357b1d7386c81a1f57c084618e3509

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/3eddf09554357b1d7386c81a1f57c084618e3509
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