Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
97b1cde8 by Andreas Tille at 2021-01-23T01:45:54+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,35 +1,35 @@
-Last-Update: Fri, 22 Jan 2021 01:42:03 +0000
+Last-Update: Sat, 23 Jan 2021 01:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 187 | {imaging,covid-19} |
- orthanc | 101 | {covid-19,imaging,practice} |
- orthanc-wsi | 54 | {imaging,his,laboratory,oncology,covid-19,practice} |
+ dcmtk | 185 | {imaging,covid-19} |
+ orthanc | 98 | {covid-19,imaging,practice} |
+ orthanc-wsi | 53 | {imaging,his,laboratory,oncology,covid-19,practice} |
gdcm | 35 | {imaging-dev} |
- amide | 31 | {imaging} |
- dicom3tools | 27 | {imaging} |
- dicomscope | 26 | {imaging} |
- htsjdk | 26 | {bio-dev} |
+ amide | 28 | {imaging} |
+ dicom3tools | 28 | {imaging} |
+ htsjdk | 25 | {bio-dev} |
+ dicomscope | 24 | {imaging} |
dcm2niix | 19 | {imaging} |
- nifticlib | 19 | {imaging} |
+ nifticlib | 18 | {imaging} |
gdcm | 17 | {covid-19,imaging} |
- gnumed-server | 16 | {covid-19,practice} |
odin | 16 | {imaging,imaging-dev} |
gdcm | 14 | {imaging-dev} |
+ gnumed-server | 14 | {covid-19,practice} |
invesalius | 14 | {imaging} |
dicomnifti | 13 | {imaging} |
minc-tools | 13 | {imaging} |
ngs-sdk | 13 | {bio-dev} |
plastimatch | 13 | {imaging} |
+ insighttoolkit4 | 11 | {imaging-dev} |
+ king | 11 | {imaging,typesetting} |
pixelmed | 11 | {imaging} |
- insighttoolkit4 | 10 | {imaging-dev} |
- king | 10 | {imaging,typesetting} |
mia | 10 | {imaging} |
vtk-dicom | 10 | {imaging} |
- ngs-sdk | 9 | {bio-dev} |
openslide | 9 | {imaging} |
adun.app | 8 | {bio} |
biojava-live | 8 | {bio-dev} |
+ ngs-sdk | 8 | {bio-dev} |
nifti2dicom | 8 | {imaging} |
orthanc-webviewer | 8 | {imaging} |
bio-tradis | 7 | {bio-dev,bio} |
@@ -38,63 +38,65 @@ Last-Update: Fri, 22 Jan 2021 01:42:03 +0000
librg-utils-perl | 7 | {bio} |
melting | 7 | {cloud,bio} |
rdp-alignment | 7 | {bio} |
- bamkit | 6 | {covid-19,bio} |
libminc | 6 | {imaging-dev} |
+ libncl | 6 | {bio} |
mauve-aligner | 6 | {bio} |
mipe | 6 | {cloud,bio} |
nifti2dicom | 6 | {imaging} |
obitools | 6 | {bio} |
+ perm | 6 | {cloud,bio} |
prime-phylo | 6 | {bio,cloud} |
- ea-utils | 5 | {bio} |
+ runcircos-gui | 6 | {bio} |
+ saint | 6 | {bio} |
+ bamkit | 5 | {covid-19,bio} |
+ biomaj3-cli | 5 | {cloud} |
+ ecopcr | 5 | {bio} |
embassy-domainatrix | 5 | {bio,cloud} |
embassy-domsearch | 5 | {cloud,bio} |
ghmm | 5 | {bio} |
- libncl | 5 | {bio} |
- libsbml | 5 | {bio-dev} |
- ngs-sdk | 5 | {bio-dev} |
+ jellyfish1 | 5 | {bio} |
+ lagan | 5 | {bio} |
+ lamarc | 5 | {bio} |
+ librdp-taxonomy-tree-java | 5 | {bio-dev} |
orthanc-dicomweb | 5 | {imaging,covid-19} |
orthanc-mysql | 5 | {imaging} |
orthanc-postgresql | 5 | {imaging} |
- perm | 5 | {cloud,bio} |
phast | 5 | {bio} |
pymia | 5 | {imaging-dev} |
- rambo-k | 5 | {bio} |
- runcircos-gui | 5 | {bio} |
- saint | 5 | {bio} |
- seqsero | 5 | {bio} |
+ rdp-classifier | 5 | {bio} |
spread-phy | 5 | {bio-phylogeny,bio} |
+ staden | 5 | {bio} |
+ tracetuner | 5 | {bio} |
treeview | 5 | {bio,bio-phylogeny} |
anfo | 4 | {cloud,bio} |
bart-view | 4 | {imaging} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
- biomaj3-cli | 4 | {cloud} |
bitseq | 4 | {bio} |
+ brig | 4 | {bio} |
clonalorigin | 4 | {bio} |
- ecopcr | 4 | {bio} |
+ ea-utils | 4 | {bio} |
embassy-domalign | 4 | {cloud,bio} |
- jellyfish1 | 4 | {bio} |
- lagan | 4 | {bio} |
- lamarc | 4 | {bio} |
libdivsufsort | 4 | {bio-dev} |
- librdp-taxonomy-tree-java | 4 | {bio-dev} |
+ libpal-java | 4 | {bio-dev} |
+ libsbml | 4 | {bio-dev} |
+ multiqc | 4 | {covid-19,bio} |
+ ngs-sdk | 4 | {bio-dev} |
paraclu | 4 | {bio,cloud} |
pbdagcon | 4 | {bio} |
phyutility | 4 | {bio,cloud} |
piler | 4 | {bio} |
proalign | 4 | {bio-phylogeny,bio} |
+ prottest | 4 | {bio,bio-phylogeny} |
pscan-chip | 4 | {bio} |
qcumber | 4 | {bio} |
quorum | 4 | {bio} |
- rdp-classifier | 4 | {bio} |
+ rambo-k | 4 | {bio} |
samblaster | 4 | {bio,covid-19} |
+ seqsero | 4 | {bio} |
sibsim4 | 4 | {bio,cloud} |
- staden | 4 | {bio} |
- tracetuner | 4 | {bio} |
arden | 3 | {cloud,bio} |
assemblytics | 3 | {bio} |
blimps | 3 | {bio} |
- brig | 3 | {bio} |
- busco | 3 | {bio,covid-19} |
canu | 3 | {bio} |
cufflinks | 3 | {cloud,bio} |
dicompyler | 3 | {oncology} |
@@ -103,22 +105,20 @@ Last-Update: Fri, 22 Jan 2021 01:42:03 +0000
getdata | 3 | {bio} |
ipig | 3 | {bio} |
jmodeltest | 3 | {bio-phylogeny,bio} |
- libpal-java | 3 | {bio-dev} |
+ mhap | 3 | {bio-ngs,bio} |
microbegps | 3 | {bio} |
nifticlib | 3 | {imaging-dev} |
phybin | 3 | {bio} |
- prottest | 3 | {bio,bio-phylogeny} |
rtax | 3 | {cloud,bio} |
- salmid | 3 | {bio} |
salmon | 3 | {covid-19,bio} |
sift | 3 | {bio} |
soapsnp | 3 | {bio} |
- srf | 3 | {bio-dev} |
stacks | 3 | {bio} |
surankco | 3 | {bio} |
tvc | 3 | {bio} |
zalign | 3 | {bio,cloud} |
blasr | 2 | {bio-ngs,bio} |
+ busco | 2 | {bio,covid-19} |
clonalframeml | 2 | {covid-19,bio} |
delly | 2 | {covid-19,bio} |
dindel | 2 | {bio} |
@@ -130,15 +130,16 @@ Last-Update: Fri, 22 Jan 2021 01:42:03 +0000
libmuscle | 2 | {bio-dev} |
logol | 2 | {bio} |
metaphlan2 | 2 | {bio} |
- mhap | 2 | {bio-ngs,bio} |
- multiqc | 2 | {covid-19,bio} |
+ oscar | 2 | {tools,practice,data} |
placnet | 2 | {bio} |
plasmidseeker | 2 | {bio} |
+ salmid | 2 | {bio} |
seqan | 2 | {bio-dev} |
sga | 2 | {bio} |
soapaligner | 2 | {bio} |
spaced | 2 | {bio} |
sprai | 2 | {bio} |
+ srf | 2 | {bio-dev} |
suitename | 2 | {bio} |
yaha | 2 | {bio} |
bambamc | 1 | {bio-dev} |
@@ -166,7 +167,6 @@ Last-Update: Fri, 22 Jan 2021 01:42:03 +0000
ncbi-vdb | 1 | {bio-dev} |
opencfu | 1 | {laboratory} |
opensurgsim | 1 | {imaging-dev} |
- oscar | 1 | {tools,practice,data} |
papyrus | 1 | {imaging-dev} |
pbseqlib | 1 | {bio-dev} |
plasmidid | 1 | {covid-19,bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/97b1cde847e30b1471d301c71913af769ad13da4
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/97b1cde847e30b1471d301c71913af769ad13da4
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