Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
30f2260a by Andreas Tille at 2021-01-26T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,30 +1,30 @@
-Last-Update: Tue, 26 Jan 2021 01:42:04 +0000
+Last-Update: Tue, 26 Jan 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 179 | {covid-19,imaging} |
- orthanc | 96 | {practice,covid-19,imaging} |
+ orthanc | 98 | {practice,covid-19,imaging} |
orthanc-wsi | 53 | {laboratory,imaging,his,covid-19,practice,oncology} |
- gdcm | 35 | {imaging-dev} |
- dicom3tools | 29 | {imaging} |
- amide | 28 | {imaging} |
- htsjdk | 26 | {bio-dev} |
- dicomscope | 24 | {imaging} |
- dcm2niix | 22 | {imaging} |
- nifticlib | 19 | {imaging} |
- gdcm | 18 | {imaging,covid-19} |
- ngs-sdk | 16 | {bio-dev} |
- odin | 16 | {imaging,imaging-dev} |
- plastimatch | 15 | {imaging} |
- dicomnifti | 14 | {imaging} |
+ gdcm | 34 | {imaging-dev} |
+ amide | 31 | {imaging} |
+ dicom3tools | 30 | {imaging} |
+ htsjdk | 27 | {bio-dev} |
+ dicomscope | 26 | {imaging} |
+ dcm2niix | 23 | {imaging} |
+ nifticlib | 20 | {imaging} |
+ gdcm | 19 | {imaging,covid-19} |
+ odin | 17 | {imaging,imaging-dev} |
+ plastimatch | 16 | {imaging} |
+ dicomnifti | 15 | {imaging} |
+ ngs-sdk | 15 | {bio-dev} |
gnumed-server | 14 | {practice,covid-19} |
+ minc-tools | 14 | {imaging} |
gdcm | 13 | {imaging-dev} |
- minc-tools | 13 | {imaging} |
+ pixelmed | 13 | {imaging} |
insighttoolkit4 | 12 | {imaging-dev} |
- pixelmed | 12 | {imaging} |
+ king | 12 | {typesetting,imaging} |
invesalius | 11 | {imaging} |
- king | 11 | {typesetting,imaging} |
- openslide | 10 | {imaging} |
+ openslide | 11 | {imaging} |
mia | 9 | {imaging} |
nifti2dicom | 9 | {imaging} |
vtk-dicom | 9 | {imaging} |
@@ -32,25 +32,27 @@ Last-Update: Tue, 26 Jan 2021 01:42:04 +0000
biojava-live | 8 | {bio-dev} |
orthanc-webviewer | 8 | {imaging} |
jebl2 | 7 | {bio-dev} |
+ librg-utils-perl | 7 | {bio} |
mauve-aligner | 7 | {bio} |
- melting | 7 | {bio,cloud} |
- ngs-sdk | 7 | {bio-dev} |
nifti2dicom | 7 | {imaging} |
bamkit | 6 | {bio,covid-19} |
bio-tradis | 6 | {bio,bio-dev} |
+ ea-utils | 6 | {bio} |
fastlink | 6 | {cloud,bio} |
libminc | 6 | {imaging-dev} |
libncl | 6 | {bio} |
- librg-utils-perl | 6 | {bio} |
+ melting | 6 | {bio,cloud} |
mipe | 6 | {bio,cloud} |
+ multiqc | 6 | {covid-19,bio} |
ngs-sdk | 6 | {bio-dev} |
obitools | 6 | {bio} |
perm | 6 | {cloud,bio} |
prime-phylo | 6 | {cloud,bio} |
+ rambo-k | 6 | {bio} |
rdp-alignment | 6 | {bio} |
runcircos-gui | 6 | {bio} |
saint | 6 | {bio} |
- ea-utils | 5 | {bio} |
+ seqsero | 6 | {bio} |
ecopcr | 5 | {bio} |
embassy-domainatrix | 5 | {bio,cloud} |
embassy-domsearch | 5 | {bio,cloud} |
@@ -59,12 +61,9 @@ Last-Update: Tue, 26 Jan 2021 01:42:04 +0000
lagan | 5 | {bio} |
lamarc | 5 | {bio} |
librdp-taxonomy-tree-java | 5 | {bio-dev} |
- multiqc | 5 | {covid-19,bio} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
phast | 5 | {bio} |
- rambo-k | 5 | {bio} |
rdp-classifier | 5 | {bio} |
- seqsero | 5 | {bio} |
spread-phy | 5 | {bio-phylogeny,bio} |
staden | 5 | {bio} |
tracetuner | 5 | {bio} |
@@ -108,8 +107,8 @@ Last-Update: Tue, 26 Jan 2021 01:42:04 +0000
jmodeltest | 3 | {bio-phylogeny,bio} |
mhap | 3 | {bio,bio-ngs} |
microbegps | 3 | {bio} |
- phybin | 3 | {bio} |
rtax | 3 | {cloud,bio} |
+ salmid | 3 | {bio} |
salmon | 3 | {bio,covid-19} |
samblaster | 3 | {covid-19,bio} |
sift | 3 | {bio} |
@@ -131,7 +130,6 @@ Last-Update: Tue, 26 Jan 2021 01:42:04 +0000
oscar | 2 | {practice,data,tools} |
placnet | 2 | {bio} |
plasmidseeker | 2 | {bio} |
- salmid | 2 | {bio} |
sga | 2 | {bio} |
sight | 2 | {imaging} |
soapaligner | 2 | {bio} |
@@ -163,13 +161,14 @@ Last-Update: Tue, 26 Jan 2021 01:42:04 +0000
libqes | 1 | {bio-dev} |
libseqlib | 1 | {bio-dev} |
libstatgen | 1 | {bio-dev} |
+ nanosv | 1 | {bio,covid-19} |
ncbi-vdb | 1 | {bio-dev} |
opensurgsim | 1 | {imaging-dev} |
papyrus | 1 | {imaging-dev} |
pbseqlib | 1 | {bio-dev} |
- plasmidid | 1 | {covid-19,bio} |
segemehl | 1 | {bio} |
seq-gen | 1 | {bio} |
+ svim | 1 | {bio} |
trace2dbest | 1 | {bio} |
varscan | 1 | {bio,covid-19} |
acedb | 0 | {cloud,bio} |
@@ -205,7 +204,6 @@ Last-Update: Tue, 26 Jan 2021 01:42:04 +0000
miaviewit | 0 | {imaging-dev} |
milib | 0 | {covid-19,bio-dev} |
mssstest | 0 | {tools} |
- nanosv | 0 | {bio,covid-19} |
nifticlib | 0 | {imaging-dev} |
opencfu | 0 | {laboratory} |
openslide | 0 | {imaging-dev} |
@@ -216,10 +214,11 @@ Last-Update: Tue, 26 Jan 2021 01:42:04 +0000
pigx-rnaseq | 0 | {bio,covid-19} |
pilercr | 0 | {bio} |
pique | 0 | {bio} |
+ plasmidid | 0 | {covid-19,bio} |
pplacer | 0 | {covid-19,bio-phylogeny,bio} |
python-bcbio-gff | 0 | {bio-dev} |
- python-seqcluster | 0 | {covid-19,bio-dev} |
python-seqcluster | 0 | {bio} |
+ python-seqcluster | 0 | {covid-19,bio-dev} |
q2-sample-classifier | 0 | {bio-dev,bio} |
resfinder-db | 0 | {bio} |
sambamba | 0 | {bio} |
@@ -232,7 +231,6 @@ Last-Update: Tue, 26 Jan 2021 01:42:04 +0000
skewer | 0 | {bio} |
smrtanalysis | 0 | {bio,covid-19} |
spaln | 0 | {bio,covid-19} |
- svim | 0 | {bio} |
thesias | 0 | {bio,covid-19} |
tophat-recondition | 0 | {covid-19,bio} |
varna | 0 | {bio} |
@@ -243,5 +241,5 @@ Last-Update: Tue, 26 Jan 2021 01:42:04 +0000
orthanc-gdcm | -1 | {imaging} |
orthanc-python | -1 | {covid-19} |
sight | -1 | {imaging-dev} |
-(273 rows)
+(271 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/30f2260ad209f281845e7baf4e51e38bc70831bb
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/30f2260ad209f281845e7baf4e51e38bc70831bb
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