Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
8696f33e by Andreas Tille at 2021-01-31T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,86 +1,86 @@
-Last-Update: Sun, 31 Jan 2021 01:42:03 +0000
+Last-Update: Sun, 31 Jan 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 174 | {imaging,covid-19} |
- orthanc | 93 | {practice,imaging,covid-19} |
+ dcmtk | 175 | {imaging,covid-19} |
+ orthanc | 94 | {practice,imaging,covid-19} |
orthanc-wsi | 52 | {laboratory,practice,his,oncology,covid-19,imaging} |
- gdcm | 34 | {imaging-dev} |
- amide | 30 | {imaging} |
- dicom3tools | 29 | {imaging} |
- htsjdk | 27 | {bio-dev} |
+ gdcm | 35 | {imaging-dev} |
+ dicom3tools | 30 | {imaging} |
+ amide | 29 | {imaging} |
+ htsjdk | 25 | {bio-dev} |
dicomscope | 22 | {imaging} |
dcm2niix | 20 | {imaging} |
- gdcm | 18 | {imaging,covid-19} |
+ gdcm | 19 | {imaging,covid-19} |
nifticlib | 17 | {imaging} |
+ odin | 16 | {imaging,imaging-dev} |
gnumed-server | 15 | {covid-19,practice} |
- odin | 15 | {imaging,imaging-dev} |
plastimatch | 14 | {imaging} |
dicomnifti | 13 | {imaging} |
gdcm | 13 | {imaging-dev} |
minc-tools | 12 | {imaging} |
- ngs-sdk | 12 | {bio-dev} |
pixelmed | 12 | {imaging} |
insighttoolkit4 | 11 | {imaging-dev} |
king | 10 | {imaging,typesetting} |
+ ngs-sdk | 10 | {bio-dev} |
+ adun.app | 9 | {bio} |
invesalius | 9 | {imaging} |
+ jebl2 | 9 | {bio-dev} |
openslide | 9 | {imaging} |
- adun.app | 8 | {bio} |
biojava-live | 8 | {bio-dev} |
- jebl2 | 8 | {bio-dev} |
+ ea-utils | 8 | {bio} |
multiqc | 8 | {covid-19,bio} |
- ea-utils | 7 | {bio} |
+ fastlink | 7 | {bio,cloud} |
+ ghmm | 7 | {bio} |
librg-utils-perl | 7 | {bio} |
mauve-aligner | 7 | {bio} |
mia | 7 | {imaging} |
+ mipe | 7 | {bio,cloud} |
ngs-sdk | 7 | {bio-dev} |
nifti2dicom | 7 | {imaging} |
obitools | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
+ prime-phylo | 7 | {bio,cloud} |
vtk-dicom | 7 | {imaging} |
bamkit | 6 | {covid-19,bio} |
+ biomaj3-cli | 6 | {cloud} |
bio-tradis | 6 | {bio,bio-dev} |
- fastlink | 6 | {bio,cloud} |
- ghmm | 6 | {bio} |
+ embassy-domainatrix | 6 | {bio,cloud} |
+ embassy-domsearch | 6 | {cloud,bio} |
+ jellyfish1 | 6 | {bio} |
lagan | 6 | {bio} |
libminc | 6 | {imaging-dev} |
libncl | 6 | {bio} |
melting | 6 | {bio,cloud} |
- mipe | 6 | {bio,cloud} |
perm | 6 | {cloud,bio} |
- prime-phylo | 6 | {bio,cloud} |
rambo-k | 6 | {bio} |
runcircos-gui | 6 | {bio} |
saint | 6 | {bio} |
seqsero | 6 | {bio} |
+ spread-phy | 6 | {bio,bio-phylogeny} |
+ staden | 6 | {bio} |
tracetuner | 6 | {bio} |
- biomaj3-cli | 5 | {cloud} |
+ beast-mcmc | 5 | {bio-phylogeny,bio} |
+ bitseq | 5 | {bio} |
+ busco | 5 | {covid-19,bio} |
ecopcr | 5 | {bio} |
- embassy-domainatrix | 5 | {bio,cloud} |
- embassy-domsearch | 5 | {cloud,bio} |
- jellyfish1 | 5 | {bio} |
+ estscan | 5 | {bio} |
lamarc | 5 | {bio} |
librdp-taxonomy-tree-java | 5 | {bio-dev} |
- ngs-sdk | 5 | {bio-dev} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
phast | 5 | {bio} |
pymia | 5 | {imaging-dev} |
rdp-alignment | 5 | {bio} |
rdp-classifier | 5 | {bio} |
- spread-phy | 5 | {bio,bio-phylogeny} |
- staden | 5 | {bio} |
+ salmid | 5 | {bio} |
treeview | 5 | {bio-phylogeny,bio} |
anfo | 4 | {cloud,bio} |
bart-view | 4 | {imaging} |
- beast-mcmc | 4 | {bio-phylogeny,bio} |
- bitseq | 4 | {bio} |
brig | 4 | {bio} |
- busco | 4 | {covid-19,bio} |
clonalorigin | 4 | {bio} |
cufflinks | 4 | {cloud,bio} |
elastix | 4 | {imaging} |
embassy-domalign | 4 | {cloud,bio} |
- estscan | 4 | {bio} |
libdivsufsort | 4 | {bio-dev} |
libpal-java | 4 | {bio-dev} |
libsbml | 4 | {bio-dev} |
@@ -96,23 +96,25 @@ Last-Update: Sun, 31 Jan 2021 01:42:03 +0000
pscan-chip | 4 | {bio} |
qcumber | 4 | {bio} |
quorum | 4 | {bio} |
- salmid | 4 | {bio} |
sibsim4 | 4 | {cloud,bio} |
- stacks | 4 | {bio} |
arden | 3 | {bio,cloud} |
assemblytics | 3 | {bio} |
blimps | 3 | {bio} |
canu | 3 | {bio} |
dicompyler | 3 | {oncology} |
+ fastml | 3 | {bio} |
getdata | 3 | {bio} |
ipig | 3 | {bio} |
jmodeltest | 3 | {bio,bio-phylogeny} |
mhap | 3 | {bio,bio-ngs} |
microbegps | 3 | {bio} |
+ ngs-sdk | 3 | {bio-dev} |
rtax | 3 | {bio,cloud} |
salmon | 3 | {covid-19,bio} |
sift | 3 | {bio} |
soapsnp | 3 | {bio} |
+ stacks | 3 | {bio} |
+ suitename | 3 | {bio} |
surankco | 3 | {bio} |
tvc | 3 | {bio} |
yaha | 3 | {bio} |
@@ -121,7 +123,6 @@ Last-Update: Sun, 31 Jan 2021 01:42:03 +0000
cat-bat | 2 | {covid-19,bio} |
clonalframeml | 2 | {bio,covid-19} |
delly | 2 | {bio,covid-19} |
- fastml | 2 | {bio} |
fsm-lite | 2 | {bio} |
gatb-core | 2 | {bio} |
hinge | 2 | {bio} |
@@ -138,7 +139,6 @@ Last-Update: Sun, 31 Jan 2021 01:42:03 +0000
spaced | 2 | {bio} |
sprai | 2 | {bio} |
srf | 2 | {bio-dev} |
- suitename | 2 | {bio} |
atropos | 1 | {bio} |
bambamc | 1 | {bio-dev} |
dextractor | 1 | {bio,covid-19} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/8696f33e98921306b9a88ba9e6791ac0639beb54
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/8696f33e98921306b9a88ba9e6791ac0639beb54
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