[med-svn] [Git][med-team/busco][master] [skip ci] Update manpage

[Nilesh Patra (@nilesh)]

Nilesh Patra pushed to branch master at Debian Med / busco


Commits:
f0a2568e by Nilesh Patra at 2021-07-25T14:41:08+00:00
[skip ci] Update manpage

- - - - -


1 changed file:

- debian/busco.1


Changes:

=====================================
debian/busco.1
=====================================
@@ -1,16 +1,16 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.16.
-.TH BUSCO "1" "July 2021" "busco 5.2.0" "User Commands"
+.TH BUSCO "1" "July 2021" "busco 5.2.2" "User Commands"
 .SH NAME
 busco \- benchmarking sets of universal single-copy orthologs
 .SH DESCRIPTION
 usage: busco \fB\-i\fR [SEQUENCE_FILE] \fB\-l\fR [LINEAGE] \fB\-o\fR [OUTPUT_NAME] \fB\-m\fR [MODE] [OTHER OPTIONS]
 .PP
-Welcome to BUSCO 5.2.0: the Benchmarking Universal Single\-Copy Ortholog assessment tool.
+Welcome to BUSCO 5.2.2: the Benchmarking Universal Single\-Copy Ortholog assessment tool.
 For more detailed usage information, please review the README file provided with this distribution and the BUSCO user guide. Visit this page https://gitlab.com/ezlab/busco#how\-to\-cite\-busco to see how to cite BUSCO
 .SS "optional arguments:"
 .TP
 \fB\-i\fR SEQUENCE_FILE, \fB\-\-in\fR SEQUENCE_FILE
-Input sequence file in FASTA format. Can be an assembled genome or transcriptome (DNA), or protein sequences from an annotated gene set.
+Input sequence file in FASTA format. Can be an assembled genome or transcriptome (DNA), or protein sequences from an annotated gene set. Also possible to use a path to a directory containing multiple input files.
 .TP
 \fB\-o\fR OUTPUT, \fB\-\-out\fR OUTPUT
 Give your analysis run a recognisable short name. Output folders and files will be labelled with this name. WARNING: do not provide a path
@@ -97,6 +97,9 @@ Disable the info logs, displays only errors
 \fB\-r\fR, \fB\-\-restart\fR
 Continue a run that had already partially completed.
 .TP
+\fB\-\-tar\fR
+Compress some subdirectories with many files to save space
+.TP
 \fB\-\-update\-data\fR
 Download and replace with last versions all lineages datasets and files necessary to their automated selection
 .TP



View it on GitLab: https://salsa.debian.org/med-team/busco/-/commit/f0a2568e2c2e800779fdfdbc5d5621c3b5b16ce7

-- 
View it on GitLab: https://salsa.debian.org/med-team/busco/-/commit/f0a2568e2c2e800779fdfdbc5d5621c3b5b16ce7
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