[med-svn] [Git][med-team/ecopcr][master] 3 commits: Add autopkgtest

[Shruti Sridhar (@shruti_sridhar)]

Shruti Sridhar pushed to branch master at Debian Med / ecopcr


Commits:
d6a684ad by Shruti Sridhar at 2021-07-31T13:40:49+05:30
Add autopkgtest

- - - - -
d33850f5 by Shruti Sridhar at 2021-07-31T13:41:06+05:30
Install docs

- - - - -
0f961add by Shruti Sridhar at 2021-07-31T13:43:00+05:30
Update changelog

- - - - -


5 changed files:

- + debian/README.test
- debian/changelog
- + debian/docs
- + debian/tests/control
- + debian/tests/run-unit-test


Changes:

=====================================
debian/README.test
=====================================
@@ -0,0 +1,12 @@
+Notes on how this package can be tested.
+────────────────────────────────────────
+
+This package can be tested by running the provided test:
+
+    sh run-unit-test
+
+in order to confirm its integrity.
+
+Notes on the files used for testing 
+────────────────────────────────────────
+ 
\ No newline at end of file


=====================================
debian/changelog
=====================================
@@ -1,3 +1,11 @@
+ecopcr (1.0.1+dfsg-3) UNRELEASED; urgency=medium
+
+  * Team Upload.
+  * Add autopkgtest
+  * Install docs
+
+ -- Shruti Sridhar <shruti.sridhar99 at gmail.com>  Sat, 31 Jul 2021 13:42:16 +0530
+
 ecopcr (1.0.1+dfsg-2) unstable; urgency=medium
 
   * Standards-Version: 4.5.1 (routine-update)


=====================================
debian/docs
=====================================
@@ -0,0 +1,2 @@
+debian/README*
+debian/tests/run-unit-test
\ No newline at end of file


=====================================
debian/tests/control
=====================================
@@ -0,0 +1,3 @@
+Tests: run-unit-test
+Depends: @
+Restrictions: allow-stderr


=====================================
debian/tests/run-unit-test
=====================================
@@ -0,0 +1,18 @@
+#!/bin/bash
+set -e
+
+pkg=ecopcr
+CUR_DIR=`pwd`
+
+export LC_ALL=C.UTF-8
+if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
+  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
+  trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
+fi
+
+cp -a ${CUR_DIR}/tests/* "${AUTOPKGTEST_TMP}"
+
+cd "${AUTOPKGTEST_TMP}"
+
+ecoPCR -d ecodb -e 3 -l 50 -L 500 TCACAGACCTGTTATTGC TYTGTCTGSTTRATTSCG > output.ecopcr
+[ -s "output.ecopcr" ] && echo "PASS Test"
\ No newline at end of file



View it on GitLab: https://salsa.debian.org/med-team/ecopcr/-/compare/1a68d4c0089ee63c05b087fe3d71094e98849069...0f961add66a24729ad1f648614a6d75e5267aa46

-- 
View it on GitLab: https://salsa.debian.org/med-team/ecopcr/-/compare/1a68d4c0089ee63c05b087fe3d71094e98849069...0f961add66a24729ad1f648614a6d75e5267aa46
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