Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
18a4220a by Andreas Tille at 2021-06-18T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,46 +1,45 @@
-Last-Update: Fri, 18 Jun 2021 01:42:03 +0000
+Last-Update: Fri, 18 Jun 2021 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 173 | {covid-19,imaging} |
- orthanc | 90 | {imaging,covid-19,practice} |
- orthanc-wsi | 47 | {oncology,laboratory,imaging,covid-19,his,practice} |
+ orthanc | 89 | {imaging,covid-19,practice} |
+ orthanc-wsi | 46 | {oncology,laboratory,imaging,covid-19,his,practice} |
gdcm | 42 | {imaging-dev} |
htsjdk | 32 | {bio-dev} |
- amide | 27 | {imaging} |
- dicom3tools | 26 | {imaging} |
+ amide | 28 | {imaging} |
+ dicom3tools | 25 | {imaging} |
openslide | 25 | {imaging} |
- dcm2niix | 19 | {imaging} |
dicomscope | 19 | {imaging} |
+ dcm2niix | 18 | {imaging} |
adun.app | 17 | {bio} |
- ngs-sdk | 16 | {bio-dev} |
odin | 16 | {imaging,imaging-dev} |
invesalius | 15 | {imaging} |
gdcm | 14 | {covid-19,imaging} |
minc-tools | 14 | {imaging} |
+ ngs-sdk | 14 | {bio-dev} |
gnumed-server | 13 | {practice,covid-19} |
- insighttoolkit4 | 13 | {imaging-dev} |
+ orthanc-webviewer | 13 | {imaging} |
dicomnifti | 12 | {imaging} |
- orthanc-webviewer | 12 | {imaging} |
+ insighttoolkit4 | 12 | {imaging-dev} |
gdcm | 11 | {imaging-dev} |
nifticlib | 11 | {imaging} |
- pixelmed | 10 | {imaging} |
- plastimatch | 9 | {imaging} |
+ pixelmed | 11 | {imaging} |
ea-utils | 8 | {bio} |
- melting | 8 | {cloud,bio} |
- ngs-sdk | 8 | {bio-dev} |
+ plastimatch | 8 | {imaging} |
salmon | 8 | {covid-19,bio} |
biojava-live | 7 | {bio-dev} |
jebl2 | 7 | {bio-dev} |
librg-utils-perl | 7 | {bio} |
+ melting | 7 | {cloud,bio} |
mia | 7 | {imaging} |
+ ngs-sdk | 7 | {bio-dev} |
+ openslide | 7 | {imaging-dev} |
runcircos-gui | 7 | {bio} |
staden | 7 | {bio} |
bio-tradis | 6 | {bio,bio-dev} |
king | 6 | {typesetting,imaging} |
- ngs-sdk | 6 | {bio-dev} |
nifti2dicom | 6 | {imaging} |
- openslide | 6 | {imaging-dev} |
treeview | 6 | {bio,bio-phylogeny} |
bitseq | 5 | {bio} |
blasr | 5 | {bio,bio-ngs} |
@@ -49,6 +48,7 @@ Last-Update: Fri, 18 Jun 2021 01:42:03 +0000
embassy-domainatrix | 5 | {cloud,bio} |
embassy-domalign | 5 | {cloud,bio} |
lagan | 5 | {bio} |
+ ngs-sdk | 5 | {bio-dev} |
obitools | 5 | {bio} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
saint | 5 | {bio} |
@@ -61,8 +61,6 @@ Last-Update: Fri, 18 Jun 2021 01:42:03 +0000
bamkit | 4 | {covid-19,bio} |
beast-mcmc | 4 | {bio-phylogeny,bio} |
canu | 4 | {bio} |
- dicompyler | 4 | {oncology} |
- elastix | 4 | {imaging} |
embassy-domsearch | 4 | {cloud,bio} |
emboss-explorer | 4 | {bio} |
gatb-core | 4 | {bio} |
@@ -83,7 +81,6 @@ Last-Update: Fri, 18 Jun 2021 01:42:03 +0000
quorum | 4 | {bio} |
rdp-alignment | 4 | {bio} |
rdp-classifier | 4 | {bio} |
- sambamba | 4 | {bio} |
sibsim4 | 4 | {bio,cloud} |
sight | 4 | {imaging} |
spaced | 4 | {bio} |
@@ -94,7 +91,9 @@ Last-Update: Fri, 18 Jun 2021 01:42:03 +0000
biomaj3-cli | 3 | {cloud} |
clonalframeml | 3 | {covid-19,bio} |
clonalorigin | 3 | {bio} |
+ dicompyler | 3 | {oncology} |
ecopcr | 3 | {bio} |
+ elastix | 3 | {imaging} |
estscan | 3 | {bio} |
fastml | 3 | {bio} |
fsm-lite | 3 | {bio} |
@@ -117,6 +116,7 @@ Last-Update: Fri, 18 Jun 2021 01:42:03 +0000
pymia | 3 | {imaging-dev} |
rambo-k | 3 | {bio} |
rtax | 3 | {bio,cloud} |
+ sambamba | 3 | {bio} |
sga | 3 | {bio} |
soapaligner | 3 | {bio} |
soapsnp | 3 | {bio} |
@@ -159,7 +159,6 @@ Last-Update: Fri, 18 Jun 2021 01:42:03 +0000
spaln | 1 | {bio,covid-19} |
srf | 1 | {bio-dev} |
varscan | 1 | {bio,covid-19} |
- vienna-rna | 1 | {bio,covid-19} |
acedb | 0 | {cloud,bio} |
bambamc | 0 | {bio-dev} |
bbmap | 0 | {covid-19,bio} |
@@ -232,6 +231,7 @@ Last-Update: Fri, 18 Jun 2021 01:42:03 +0000
tophat-recondition | 0 | {covid-19,bio} |
trace2dbest | 0 | {bio} |
varna | 0 | {bio} |
+ vienna-rna | 0 | {bio,covid-19} |
xdffileio | 0 | {imaging-dev} |
yanagiba | 0 | {bio,covid-19} |
mssstest | -1 | {tools} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/18a4220a5896001ae74ab5961dcc6b0e927e1b19
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/18a4220a5896001ae74ab5961dcc6b0e927e1b19
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