[med-svn] [Git][med-team/swarm-cluster][master] 6 commits: d/control: Add arm64 and ppc64el to architecture list

Nilesh Patra (@nilesh) gitlab at salsa.debian.org
Mon Jun 28 19:18:23 BST 2021



Nilesh Patra pushed to branch master at Debian Med / swarm-cluster


Commits:
11a1f2f2 by Nilesh Patra at 2021-06-28T23:35:19+05:30
d/control: Add arm64 and ppc64el to architecture list

- - - - -
ffa03ff6 by Nilesh Patra at 2021-06-28T23:35:19+05:30
Bump debhelper-compat version to 13

- - - - -
a526344c by Nilesh Patra at 2021-06-28T23:35:19+05:30
Declare compliance with policy 4.5.1

- - - - -
d263cbab by Nilesh Patra at 2021-06-28T23:35:19+05:30
Add "Rules-Requires-Root: no"

- - - - -
39b245a9 by Nilesh Patra at 2021-06-28T23:35:19+05:30
Fix privacy breach warns

- - - - -
93e3d1fa by Nilesh Patra at 2021-06-28T23:35:52+05:30
Interim changelog entry

- - - - -


4 changed files:

- debian/changelog
- debian/control
- + debian/patches/privacy-breach.patch
- debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
@@ -1,12 +1,18 @@
 swarm-cluster (3.1.0+dfsg-1) UNRELEASED; urgency=medium
 
-  * d/watch: Fix watch regex
+  * Team Upload.
   * New upstream version 3.1.0+dfsg
-  * d/p/hardening.patch: Refresh
-  * d/p/allow_cxx_override.patch: Refresh
+  * d/watch: Fix watch regex
+  * Refresh patches
   * Add d/salsa-ci.yml
-
- -- Nilesh Patra <nilesh at debian.org>  Mon, 28 Jun 2021 23:10:20 +0530
+  * d/control:
+     - Add arm64 and ppc64el to architecture list
+     - Bump debhelper-compat version to 13
+     - Declare compliance with policy 4.5.1
+     - Add "Rules-Requires-Root: no"
+  * d/p/privacy-breach.patch: Fix privacy breach warns
+
+ -- Nilesh Patra <nilesh at debian.org>  Mon, 28 Jun 2021 23:29:05 +0530
 
 swarm-cluster (3.0.0+dfsg-2) unstable; urgency=medium
 


=====================================
debian/control
=====================================
@@ -4,16 +4,17 @@ Uploaders: Tim Booth <tbooth at ceh.ac.uk>,
            Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper-compat (= 12),
+Build-Depends: debhelper-compat (= 13),
                man-db,
                markdown
-Standards-Version: 4.5.0
+Standards-Version: 4.5.1
 Vcs-Browser: https://salsa.debian.org/med-team/swarm-cluster
 Vcs-Git: https://salsa.debian.org/med-team/swarm-cluster.git
 Homepage: https://github.com/torognes/swarm
+Rules-Requires-Root: no
 
 Package: swarm
-Architecture: amd64
+Architecture: amd64 arm64 ppc64el
 Depends: ${shlibs:Depends},
          ${misc:Depends}
 Recommends: python3


=====================================
debian/patches/privacy-breach.patch
=====================================
@@ -0,0 +1,22 @@
+Description: Avoid remote location access to fix privacy breach lintian warn
+Author: Nilesh Patra <nilesh at debian.org>
+Forwarded: Not-Needed
+Last-Update: 2021-06-28
+--- a/README.md
++++ b/README.md
+@@ -1,5 +1,3 @@
+-[![Build Status](https://travis-ci.org/torognes/swarm.svg)](https://travis-ci.org/torognes/swarm) [![codecov](https://codecov.io/gh/torognes/swarm/branch/master/graph/badge.svg)](https://codecov.io/gh/torognes/swarm)
+-
+ # swarm
+ 
+ A robust and fast clustering method for amplicon-based studies.
+@@ -298,9 +296,6 @@
+ is described in the figure below:
+ 
+ 
+-![](https://github.com/frederic-mahe/swarm/blob/master/figures/swarm_2.0_fastidious_reduced.png)
+-
+-
+ ### Count the number of amplicons per cluster ###
+ 
+ You might want to check the size distribution of clusters (number of


=====================================
debian/patches/series
=====================================
@@ -1,3 +1,4 @@
 hardening.patch
 allow_cxx_override.patch
 # fix_gcc6.patch
+privacy-breach.patch



View it on GitLab: https://salsa.debian.org/med-team/swarm-cluster/-/compare/de30942d7ab60fedff20a735f6ce9e968fe932bb...93e3d1faba7916fc84b41e7ba07eb846ab142994

-- 
View it on GitLab: https://salsa.debian.org/med-team/swarm-cluster/-/compare/de30942d7ab60fedff20a735f6ce9e968fe932bb...93e3d1faba7916fc84b41e7ba07eb846ab142994
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