Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
0d7916be by Andreas Tille at 2021-03-02T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,36 +1,36 @@
-Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
+Last-Update: Tue, 02 Mar 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 188 | {imaging,covid-19} |
- orthanc | 97 | {covid-19,imaging,practice} |
- orthanc-wsi | 48 | {imaging,covid-19,laboratory,his,oncology,practice} |
+ dcmtk | 186 | {imaging,covid-19} |
+ orthanc | 96 | {covid-19,imaging,practice} |
+ orthanc-wsi | 49 | {imaging,covid-19,laboratory,his,oncology,practice} |
gdcm | 46 | {imaging-dev} |
- amide | 43 | {imaging} |
+ amide | 40 | {imaging} |
dicom3tools | 38 | {imaging} |
dicomscope | 31 | {imaging} |
+ dcm2niix | 24 | {imaging} |
htsjdk | 24 | {bio-dev} |
- dcm2niix | 23 | {imaging} |
- nifticlib | 23 | {imaging} |
+ nifticlib | 24 | {imaging} |
dicomnifti | 22 | {imaging} |
- minc-tools | 20 | {imaging} |
+ minc-tools | 21 | {imaging} |
+ gdcm | 20 | {covid-19,imaging} |
odin | 20 | {imaging,imaging-dev} |
- gdcm | 19 | {covid-19,imaging} |
- plastimatch | 16 | {imaging} |
+ plastimatch | 17 | {imaging} |
+ invesalius | 16 | {imaging} |
+ vtk-dicom | 16 | {imaging} |
gnumed-server | 15 | {covid-19,practice} |
- invesalius | 15 | {imaging} |
- vtk-dicom | 15 | {imaging} |
- mia | 13 | {imaging} |
- pixelmed | 13 | {imaging} |
- gdcm | 12 | {imaging-dev} |
- ngs-sdk | 12 | {bio-dev} |
- openslide | 12 | {imaging} |
+ mia | 14 | {imaging} |
+ pixelmed | 14 | {imaging} |
+ gdcm | 13 | {imaging-dev} |
+ ngs-sdk | 13 | {bio-dev} |
+ openslide | 13 | {imaging} |
+ nifti2dicom | 12 | {imaging} |
adun.app | 11 | {bio} |
+ king | 11 | {typesetting,imaging} |
nifti2dicom | 11 | {imaging} |
insighttoolkit4 | 10 | {imaging-dev} |
jebl2 | 10 | {bio-dev} |
- king | 10 | {typesetting,imaging} |
- nifti2dicom | 10 | {imaging} |
orthanc-webviewer | 10 | {imaging} |
biojava-live | 9 | {bio-dev} |
jellyfish1 | 9 | {bio} |
@@ -52,11 +52,13 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
stacks | 7 | {bio} |
treeview | 7 | {bio-phylogeny,bio} |
arden | 6 | {bio,cloud} |
+ bart-view | 6 | {imaging} |
clonalorigin | 6 | {bio} |
elastix | 6 | {imaging} |
embassy-domalign | 6 | {cloud,bio} |
embassy-domsearch | 6 | {bio,cloud} |
lamarc | 6 | {bio} |
+ libpal-java | 6 | {bio-dev} |
librg-utils-perl | 6 | {bio} |
libsbml | 6 | {bio-dev} |
mauve-aligner | 6 | {bio} |
@@ -70,8 +72,8 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
sibsim4 | 6 | {bio,cloud} |
soapsnp | 6 | {bio} |
spread-phy | 6 | {bio,bio-phylogeny} |
+ staden | 6 | {bio} |
assemblytics | 5 | {bio} |
- bart-view | 5 | {imaging} |
brig | 5 | {bio} |
canu | 5 | {bio} |
clonalframeml | 5 | {bio,covid-19} |
@@ -82,7 +84,6 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
ipig | 5 | {bio} |
jmodeltest | 5 | {bio-phylogeny,bio} |
libminc | 5 | {imaging-dev} |
- libpal-java | 5 | {bio-dev} |
openslide | 5 | {imaging-dev} |
paraclu | 5 | {cloud,bio} |
proalign | 5 | {bio,bio-phylogeny} |
@@ -95,7 +96,6 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
samblaster | 5 | {bio,covid-19} |
seqsero | 5 | {bio} |
soapaligner | 5 | {bio} |
- staden | 5 | {bio} |
surankco | 5 | {bio} |
tracetuner | 5 | {bio} |
tvc | 5 | {bio} |
@@ -149,12 +149,14 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
bbmap | 1 | {bio,covid-19} |
bustools | 1 | {covid-19,bio} |
ctn | 1 | {imaging-dev} |
+ eegdev | 1 | {imaging-dev} |
emboss-explorer | 1 | {bio} |
emmax | 1 | {bio} |
libctapimkt | 1 | {practice} |
libmuscle | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
ncbi-vdb | 1 | {bio-dev} |
+ opencfu | 1 | {laboratory} |
opensurgsim | 1 | {imaging-dev} |
orthanc-gdcm | 1 | {imaging} |
papyrus | 1 | {imaging-dev} |
@@ -173,6 +175,7 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
thesias | 1 | {covid-19,bio} |
tophat-recondition | 1 | {bio,covid-19} |
varna | 1 | {bio} |
+ vtk-dicom | 1 | {imaging-dev} |
yanagiba | 1 | {covid-19,bio} |
bambamc | 0 | {bio-dev} |
biojava4-live | 0 | {bio-dev} |
@@ -180,7 +183,6 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
bmtk | 0 | {psychology} |
camp | 0 | {imaging-dev} |
dextractor | 0 | {bio,covid-19} |
- eegdev | 0 | {imaging-dev} |
fis-gtm | 0 | {his} |
gatb-core | 0 | {bio-dev} |
htscodecs | 0 | {bio-dev,covid-19} |
@@ -219,13 +221,12 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
milib | 0 | {bio-dev,covid-19} |
mssstest | 0 | {tools} |
nifticlib | 0 | {imaging-dev} |
- opencfu | 0 | {laboratory} |
orthanc-imagej | 0 | {imaging} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
plasmidid | 0 | {covid-19,bio} |
- python-seqcluster | 0 | {covid-19,bio-dev} |
python-seqcluster | 0 | {bio} |
+ python-seqcluster | 0 | {covid-19,bio-dev} |
q2-sample-classifier | 0 | {bio,bio-dev} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
@@ -234,7 +235,6 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
simpleitk | 0 | {imaging-dev} |
smrtanalysis | 0 | {covid-19,bio} |
vienna-rna | 0 | {bio,covid-19} |
- vtk-dicom | 0 | {imaging-dev} |
xdffileio | 0 | {imaging-dev} |
orthanc-python | -1 | {covid-19} |
(267 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0d7916be05ed656e4bc4f32af179c7eb80b0067a
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0d7916be05ed656e4bc4f32af179c7eb80b0067a
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