[med-svn] [Git][med-team/seqsero][master] 3 commits: The output seems to contain CPU time and a few other params which might lead...

[Nilesh Patra]

Nilesh Patra pushed to branch master at Debian Med / seqsero


Commits:
68d033a8 by Nilesh Patra at 2021-03-10T17:52:06+05:30
The output seems to contain CPU time and a few other params which might lead to problems on other arches hence avoid checksum comparision

- - - - -
ca5367dc by Nilesh Patra at 2021-03-10T17:53:13+05:30
Minor nitpick

- - - - -
a7f49720 by Nilesh Patra at 2021-03-10T17:57:40+05:30
Update changelog

- - - - -


3 changed files:

- debian/README.test
- debian/changelog
- debian/tests/run-unit-test


Changes:

=====================================
debian/README.test
=====================================
@@ -7,7 +7,7 @@ This package can be tested by running the provided test:
 
 in order to confirm its integrity.
 
-Notes on the files used for testing 
+Notes on the files used for testing
 ────────────────────────────────────────
 Files: debian/tests/data/*
 Source: https://www.ncbi.nlm.nih.gov/sra/SRX839168


=====================================
debian/changelog
=====================================
@@ -1,12 +1,14 @@
-seqsero (1.0.1+dfsg-2ubuntu1) UNRELEASED; urgency=medium
+seqsero (1.0.1+dfsg-3) unstable; urgency=medium
 
+  * Team Upload.
   [ Nilesh Patra ]
-  * Add test depends on current package, cleaup debug statements
+  * Add test depends on current package,
+    cleanup test debug statements
 
   [ Shruti Sridhar ]
-  * Update 2to3 patch
-  * Add autopkgtest. Closes #970598
-  * Add docs
+  * Update 2to3 patch (Closes: #984854)
+  * Add autopkgtest. (Closes: #970598)
+  * Both the above changes are meant as targeted fixes
 
  -- Shruti Sridhar <shruti.sridhar99 at gmail.com>  Sun, 07 Mar 2021 23:47:46 +0530
 


=====================================
debian/tests/run-unit-test
=====================================
@@ -13,11 +13,9 @@ cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}"
 
 cd "${AUTOPKGTEST_TMP}"
 
+echo "Test for checking functionality"
 seqsero -m 3 -i sra_data.fastq
 cat $(find -name "Seqsero_result.txt") > result
-echo "d87480d5b8ed2cb5125583b02c8694ed  result" > checksums
-md5sum --check checksums
-
-
-
-
+[ -s result ] || exit 1
+cat result
+echo "PASS"



View it on GitLab: https://salsa.debian.org/med-team/seqsero/-/compare/c5585ac2f573396a4b20d303980e2e44bbb4a83b...a7f497203393b745461b597bfc627596c82973f5

-- 
View it on GitLab: https://salsa.debian.org/med-team/seqsero/-/compare/c5585ac2f573396a4b20d303980e2e44bbb4a83b...a7f497203393b745461b597bfc627596c82973f5
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