Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
d65ddb6b by Andreas Tille at 2021-03-11T13:42:21+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,21 +1,21 @@
-Last-Update: Thu, 11 Mar 2021 01:42:03 +0000
+Last-Update: Thu, 11 Mar 2021 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 193 | {imaging,covid-19} |
- orthanc | 91 | {covid-19,imaging,practice} |
+ dcmtk | 195 | {imaging,covid-19} |
+ orthanc | 92 | {covid-19,imaging,practice} |
+ gdcm | 46 | {imaging-dev} |
orthanc-wsi | 46 | {covid-19,his,practice,oncology,imaging,laboratory} |
- gdcm | 45 | {imaging-dev} |
dicom3tools | 41 | {imaging} |
- amide | 40 | {imaging} |
+ amide | 39 | {imaging} |
dicomscope | 34 | {imaging} |
dcm2niix | 25 | {imaging} |
nifticlib | 25 | {imaging} |
htsjdk | 24 | {bio-dev} |
dicomnifti | 21 | {imaging} |
gdcm | 21 | {imaging,covid-19} |
- odin | 21 | {imaging,imaging-dev} |
minc-tools | 20 | {imaging} |
+ odin | 20 | {imaging,imaging-dev} |
gnumed-server | 17 | {covid-19,practice} |
plastimatch | 16 | {imaging} |
vtk-dicom | 16 | {imaging} |
@@ -46,7 +46,6 @@ Last-Update: Thu, 11 Mar 2021 01:42:03 +0000
obitools | 6 | {bio} |
phast | 6 | {bio} |
salmon | 6 | {covid-19,bio} |
- seqsero | 6 | {bio} |
treeview | 6 | {bio,bio-phylogeny} |
anfo | 5 | {bio,cloud} |
arden | 5 | {bio,cloud} |
@@ -63,6 +62,7 @@ Last-Update: Thu, 11 Mar 2021 01:42:03 +0000
lamarc | 5 | {bio} |
libminc | 5 | {imaging-dev} |
libncl | 5 | {bio} |
+ librg-utils-perl | 5 | {bio} |
orthanc-dicomweb | 5 | {imaging,covid-19} |
perm | 5 | {cloud,bio} |
phyutility | 5 | {bio,cloud} |
@@ -80,6 +80,7 @@ Last-Update: Thu, 11 Mar 2021 01:42:03 +0000
yaha | 5 | {bio} |
zalign | 5 | {cloud,bio} |
assemblytics | 4 | {bio} |
+ bamkit | 4 | {covid-19,bio} |
bart-view | 4 | {imaging} |
biomaj3-cli | 4 | {cloud} |
blasr | 4 | {bio-ngs,bio} |
@@ -91,7 +92,6 @@ Last-Update: Thu, 11 Mar 2021 01:42:03 +0000
ipig | 4 | {bio} |
jmodeltest | 4 | {bio,bio-phylogeny} |
libdivsufsort | 4 | {bio-dev} |
- librg-utils-perl | 4 | {bio} |
mauve-aligner | 4 | {bio} |
microbegps | 4 | {bio} |
ngs-sdk | 4 | {bio-dev} |
@@ -108,7 +108,6 @@ Last-Update: Thu, 11 Mar 2021 01:42:03 +0000
spread-phy | 4 | {bio,bio-phylogeny} |
surankco | 4 | {bio} |
atropos | 3 | {bio} |
- bamkit | 3 | {covid-19,bio} |
brig | 3 | {bio} |
canu | 3 | {bio} |
delly | 3 | {covid-19,bio} |
@@ -137,6 +136,7 @@ Last-Update: Thu, 11 Mar 2021 01:42:03 +0000
nifticlib | 2 | {imaging-dev} |
orthanc-mysql | 2 | {imaging} |
pbdagcon | 2 | {bio} |
+ plasmidid | 2 | {covid-19,bio} |
plasmidseeker | 2 | {bio} |
sambamba | 2 | {bio} |
segemehl | 2 | {bio} |
@@ -164,7 +164,6 @@ Last-Update: Thu, 11 Mar 2021 01:42:03 +0000
pigx-rnaseq | 1 | {bio,covid-19} |
pilercr | 1 | {bio} |
pique | 1 | {bio} |
- plasmidid | 1 | {covid-19,bio} |
pplacer | 1 | {bio,bio-phylogeny,covid-19} |
python-bcbio-gff | 1 | {bio-dev} |
samtools-legacy | 1 | {bio-dev} |
@@ -224,8 +223,8 @@ Last-Update: Thu, 11 Mar 2021 01:42:03 +0000
orthanc-imagej | 0 | {imaging} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
- python-seqcluster | 0 | {covid-19,bio-dev} |
python-seqcluster | 0 | {bio} |
+ python-seqcluster | 0 | {covid-19,bio-dev} |
q2-sample-classifier | 0 | {bio-dev,bio} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
@@ -237,5 +236,5 @@ Last-Update: Thu, 11 Mar 2021 01:42:03 +0000
vienna-rna | 0 | {covid-19,bio} |
xdffileio | 0 | {imaging-dev} |
orthanc-python | -1 | {covid-19} |
-(267 rows)
+(266 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d65ddb6be0245423e3de8d8f4c8dad74b5a4adef
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d65ddb6be0245423e3de8d8f4c8dad74b5a4adef
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