Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
c3b2afc7 by Andreas Tille at 2021-03-14T13:43:00+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,49 +1,51 @@
-Last-Update: Sun, 14 Mar 2021 01:42:04 +0000
+Last-Update: Sun, 14 Mar 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 195 | {imaging,covid-19} |
- orthanc | 92 | {covid-19,imaging,practice} |
- orthanc-wsi | 45 | {covid-19,his,practice,oncology,imaging,laboratory} |
- gdcm | 44 | {imaging-dev} |
- amide | 41 | {imaging} |
- dicom3tools | 37 | {imaging} |
- dicomscope | 35 | {imaging} |
- htsjdk | 24 | {bio-dev} |
- dcm2niix | 23 | {imaging} |
- nifticlib | 23 | {imaging} |
- dicomnifti | 18 | {imaging} |
- gdcm | 18 | {imaging,covid-19} |
+ dcmtk | 199 | {imaging,covid-19} |
+ orthanc | 93 | {covid-19,imaging,practice} |
+ gdcm | 47 | {imaging-dev} |
+ orthanc-wsi | 46 | {covid-19,his,practice,oncology,imaging,laboratory} |
+ amide | 42 | {imaging} |
+ dicom3tools | 38 | {imaging} |
+ dicomscope | 36 | {imaging} |
+ dcm2niix | 24 | {imaging} |
+ nifticlib | 24 | {imaging} |
+ htsjdk | 21 | {bio-dev} |
+ odin | 20 | {imaging,imaging-dev} |
+ dicomnifti | 19 | {imaging} |
+ gdcm | 19 | {imaging,covid-19} |
gnumed-server | 18 | {covid-19,practice} |
- odin | 18 | {imaging,imaging-dev} |
- minc-tools | 17 | {imaging} |
- invesalius | 15 | {imaging} |
- plastimatch | 15 | {imaging} |
- openslide | 14 | {imaging} |
- pixelmed | 14 | {imaging} |
- vtk-dicom | 14 | {imaging} |
- mia | 12 | {imaging} |
+ minc-tools | 18 | {imaging} |
+ invesalius | 17 | {imaging} |
+ plastimatch | 16 | {imaging} |
+ openslide | 15 | {imaging} |
+ pixelmed | 15 | {imaging} |
+ vtk-dicom | 15 | {imaging} |
+ mia | 13 | {imaging} |
+ insighttoolkit4 | 12 | {imaging-dev} |
adun.app | 11 | {bio} |
+ gdcm | 11 | {imaging-dev} |
nifti2dicom | 11 | {imaging} |
- gdcm | 10 | {imaging-dev} |
- insighttoolkit4 | 10 | {imaging-dev} |
nifti2dicom | 10 | {imaging} |
orthanc-webviewer | 10 | {imaging} |
+ king | 9 | {imaging,typesetting} |
ngs-sdk | 9 | {bio-dev} |
jebl2 | 8 | {bio-dev} |
- king | 8 | {imaging,typesetting} |
- ngs-sdk | 8 | {bio-dev} |
+ melting | 8 | {cloud,bio} |
biojava-live | 7 | {bio-dev} |
dicompyler | 7 | {oncology} |
ea-utils | 7 | {bio} |
jellyfish1 | 7 | {bio} |
lagan | 7 | {bio} |
- melting | 7 | {cloud,bio} |
obitools | 7 | {bio} |
stacks | 7 | {bio} |
bitseq | 6 | {bio} |
embassy-domainatrix | 6 | {cloud,bio} |
+ libminc | 6 | {imaging-dev} |
+ librg-utils-perl | 6 | {bio} |
libsbml | 6 | {bio-dev} |
+ ngs-sdk | 6 | {bio-dev} |
phast | 6 | {bio} |
rambo-k | 6 | {bio} |
salmid | 6 | {bio} |
@@ -52,6 +54,7 @@ Last-Update: Sun, 14 Mar 2021 01:42:04 +0000
anfo | 5 | {bio,cloud} |
arden | 5 | {bio,cloud} |
bamkit | 5 | {covid-19,bio} |
+ bart-view | 5 | {imaging} |
beast-mcmc | 5 | {bio-phylogeny,bio} |
bio-tradis | 5 | {bio-dev,bio} |
busco | 5 | {bio,covid-19} |
@@ -59,12 +62,10 @@ Last-Update: Sun, 14 Mar 2021 01:42:04 +0000
cufflinks | 5 | {bio,cloud} |
ecopcr | 5 | {bio} |
embassy-domalign | 5 | {bio,cloud} |
+ estscan | 5 | {bio} |
ghmm | 5 | {bio} |
lamarc | 5 | {bio} |
- libminc | 5 | {imaging-dev} |
libncl | 5 | {bio} |
- librg-utils-perl | 5 | {bio} |
- orthanc-dicomweb | 5 | {imaging,covid-19} |
perm | 5 | {cloud,bio} |
phyutility | 5 | {bio,cloud} |
pymia | 5 | {imaging-dev} |
@@ -72,7 +73,6 @@ Last-Update: Sun, 14 Mar 2021 01:42:04 +0000
rdp-alignment | 5 | {bio} |
runcircos-gui | 5 | {bio} |
saint | 5 | {bio} |
- samblaster | 5 | {bio,covid-19} |
sibsim4 | 5 | {bio,cloud} |
staden | 5 | {bio} |
tracetuner | 5 | {bio} |
@@ -80,14 +80,11 @@ Last-Update: Sun, 14 Mar 2021 01:42:04 +0000
yaha | 5 | {bio} |
zalign | 5 | {cloud,bio} |
assemblytics | 4 | {bio} |
- atropos | 4 | {bio} |
- bart-view | 4 | {imaging} |
biomaj3-cli | 4 | {cloud} |
blasr | 4 | {bio-ngs,bio} |
clonalframeml | 4 | {covid-19,bio} |
elastix | 4 | {imaging} |
embassy-domsearch | 4 | {bio,cloud} |
- estscan | 4 | {bio} |
fsm-lite | 4 | {bio} |
gatb-core | 4 | {bio} |
getdata | 4 | {bio} |
@@ -96,18 +93,22 @@ Last-Update: Sun, 14 Mar 2021 01:42:04 +0000
libdivsufsort | 4 | {bio-dev} |
mauve-aligner | 4 | {bio} |
microbegps | 4 | {bio} |
- ngs-sdk | 4 | {bio-dev} |
openslide | 4 | {imaging-dev} |
+ orthanc-dicomweb | 4 | {imaging,covid-19} |
paraclu | 4 | {cloud,bio} |
piler | 4 | {bio} |
prime-phylo | 4 | {bio,cloud} |
proalign | 4 | {bio,bio-phylogeny} |
qcumber | 4 | {bio} |
rtax | 4 | {bio,cloud} |
+ samblaster | 4 | {bio,covid-19} |
+ sight | 4 | {imaging} |
soapaligner | 4 | {bio} |
soapsnp | 4 | {bio} |
spread-phy | 4 | {bio,bio-phylogeny} |
surankco | 4 | {bio} |
+ atropos | 3 | {bio} |
+ blimps | 3 | {bio} |
brig | 3 | {bio} |
canu | 3 | {bio} |
delly | 3 | {covid-19,bio} |
@@ -117,30 +118,29 @@ Last-Update: Sun, 14 Mar 2021 01:42:04 +0000
libpal-java | 3 | {bio-dev} |
librdp-taxonomy-tree-java | 3 | {bio-dev} |
mhap | 3 | {bio-ngs,bio} |
+ nifticlib | 3 | {imaging-dev} |
orthanc-postgresql | 3 | {imaging} |
oscar | 3 | {tools,practice,data} |
placnet | 3 | {bio} |
pscan-chip | 3 | {bio} |
rdp-classifier | 3 | {bio} |
sga | 3 | {bio} |
- sight | 3 | {imaging} |
+ sift | 3 | {bio} |
spaced | 3 | {bio} |
sprai | 3 | {bio} |
suitename | 3 | {bio} |
varscan | 3 | {bio,covid-19} |
- blimps | 2 | {bio} |
cat-bat | 2 | {bio,covid-19} |
kmerresistance | 2 | {bio} |
logol | 2 | {bio} |
nanosv | 2 | {bio,covid-19} |
- nifticlib | 2 | {imaging-dev} |
+ ngs-sdk | 2 | {bio-dev} |
orthanc-mysql | 2 | {imaging} |
pbdagcon | 2 | {bio} |
plasmidid | 2 | {covid-19,bio} |
plasmidseeker | 2 | {bio} |
sambamba | 2 | {bio} |
segemehl | 2 | {bio} |
- sift | 2 | {bio} |
skesa | 2 | {bio} |
spaln | 2 | {covid-19,bio} |
trace2dbest | 2 | {bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/c3b2afc74db5e1d44510309e9f100432f02192ad
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/c3b2afc74db5e1d44510309e9f100432f02192ad
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