Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
ae685cf5 by Andreas Tille at 2021-03-20T13:42:26+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,40 +1,39 @@
-Last-Update: Sat, 20 Mar 2021 01:42:03 +0000
+Last-Update: Sat, 20 Mar 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 203 | {imaging,covid-19} |
- orthanc | 95 | {covid-19,imaging,practice} |
- orthanc-wsi | 48 | {covid-19,his,practice,oncology,imaging,laboratory} |
+ dcmtk | 201 | {imaging,covid-19} |
+ orthanc | 94 | {covid-19,imaging,practice} |
+ orthanc-wsi | 47 | {covid-19,his,practice,oncology,imaging,laboratory} |
gdcm | 41 | {imaging-dev} |
- amide | 37 | {imaging} |
- dicom3tools | 33 | {imaging} |
- dicomscope | 33 | {imaging} |
- openslide | 24 | {imaging} |
- dcm2niix | 23 | {imaging} |
+ amide | 35 | {imaging} |
+ dicom3tools | 32 | {imaging} |
+ dicomscope | 32 | {imaging} |
htsjdk | 23 | {bio-dev} |
+ openslide | 23 | {imaging} |
+ dcm2niix | 22 | {imaging} |
nifticlib | 20 | {imaging} |
+ odin | 20 | {imaging,imaging-dev} |
gdcm | 19 | {imaging,covid-19} |
- gnumed-server | 18 | {covid-19,practice} |
- odin | 18 | {imaging,imaging-dev} |
- dicomnifti | 17 | {imaging} |
- invesalius | 16 | {imaging} |
- gdcm | 15 | {imaging-dev} |
- minc-tools | 15 | {imaging} |
+ gnumed-server | 17 | {covid-19,practice} |
+ dicomnifti | 16 | {imaging} |
+ invesalius | 15 | {imaging} |
+ gdcm | 14 | {imaging-dev} |
+ minc-tools | 14 | {imaging} |
pixelmed | 14 | {imaging} |
- vtk-dicom | 14 | {imaging} |
- plastimatch | 13 | {imaging} |
- mia | 12 | {imaging} |
- adun.app | 11 | {bio} |
+ vtk-dicom | 13 | {imaging} |
+ plastimatch | 12 | {imaging} |
insighttoolkit4 | 11 | {imaging-dev} |
+ mia | 11 | {imaging} |
+ adun.app | 10 | {bio} |
ngs-sdk | 10 | {bio-dev} |
orthanc-webviewer | 10 | {imaging} |
ngs-sdk | 9 | {bio-dev} |
- nifti2dicom | 9 | {imaging} |
nifti2dicom | 8 | {imaging} |
obitools | 8 | {bio} |
+ nifti2dicom | 7 | {imaging} |
stacks | 7 | {bio} |
bamkit | 6 | {covid-19,bio} |
- dicompyler | 6 | {oncology} |
ea-utils | 6 | {bio} |
jebl2 | 6 | {bio-dev} |
king | 6 | {imaging,typesetting} |
@@ -45,32 +44,32 @@ Last-Update: Sat, 20 Mar 2021 01:42:03 +0000
biojava-live | 5 | {bio-dev} |
busco | 5 | {bio,covid-19} |
cufflinks | 5 | {bio,cloud} |
- ghmm | 5 | {bio} |
+ dicompyler | 5 | {oncology} |
jellyfish1 | 5 | {bio} |
libminc | 5 | {imaging-dev} |
librg-utils-perl | 5 | {bio} |
libsbml | 5 | {bio-dev} |
- pymia | 5 | {imaging-dev} |
+ openslide | 5 | {imaging-dev} |
rambo-k | 5 | {bio} |
- treeview | 5 | {bio,bio-phylogeny} |
beast-mcmc | 4 | {bio-phylogeny,bio} |
biomaj3-cli | 4 | {cloud} |
bio-tradis | 4 | {bio-dev,bio} |
bitseq | 4 | {bio} |
clonalorigin | 4 | {bio} |
ecopcr | 4 | {bio} |
- elastix | 4 | {imaging} |
embassy-domainatrix | 4 | {cloud,bio} |
estscan | 4 | {bio} |
+ ghmm | 4 | {bio} |
libncl | 4 | {bio} |
ngs-sdk | 4 | {bio-dev} |
- openslide | 4 | {imaging-dev} |
orthanc-dicomweb | 4 | {imaging,covid-19} |
phast | 4 | {bio} |
+ pymia | 4 | {imaging-dev} |
rdp-alignment | 4 | {bio} |
salmon | 4 | {covid-19,bio} |
sight | 4 | {imaging} |
tracetuner | 4 | {bio} |
+ treeview | 4 | {bio,bio-phylogeny} |
tvc | 4 | {bio} |
anfo | 3 | {bio,cloud} |
arden | 3 | {bio,cloud} |
@@ -78,24 +77,21 @@ Last-Update: Sat, 20 Mar 2021 01:42:03 +0000
blasr | 3 | {bio-ngs,bio} |
blimps | 3 | {bio} |
clonalframeml | 3 | {covid-19,bio} |
+ elastix | 3 | {imaging} |
embassy-domalign | 3 | {bio,cloud} |
fsm-lite | 3 | {bio} |
- getdata | 3 | {bio} |
jmodeltest | 3 | {bio,bio-phylogeny} |
- lamarc | 3 | {bio} |
libpal-java | 3 | {bio-dev} |
mauve-aligner | 3 | {bio} |
microbegps | 3 | {bio} |
nifticlib | 3 | {imaging-dev} |
orthanc-postgresql | 3 | {imaging} |
- pbdagcon | 3 | {bio} |
+ oscar | 3 | {tools,practice,data} |
perm | 3 | {cloud,bio} |
phyutility | 3 | {bio,cloud} |
piler | 3 | {bio} |
qcumber | 3 | {bio} |
quorum | 3 | {bio} |
- runcircos-gui | 3 | {bio} |
- saint | 3 | {bio} |
samblaster | 3 | {bio,covid-19} |
sibsim4 | 3 | {bio,cloud} |
sift | 3 | {bio} |
@@ -112,16 +108,18 @@ Last-Update: Sat, 20 Mar 2021 01:42:03 +0000
embassy-domsearch | 2 | {bio,cloud} |
fastml | 2 | {bio} |
gatb-core | 2 | {bio} |
+ getdata | 2 | {bio} |
gifticlib | 2 | {imaging-dev} |
hinge | 2 | {bio} |
ipig | 2 | {bio} |
+ lamarc | 2 | {bio} |
libdivsufsort | 2 | {bio-dev} |
librdp-taxonomy-tree-java | 2 | {bio-dev} |
logol | 2 | {bio} |
mhap | 2 | {bio-ngs,bio} |
orthanc-mysql | 2 | {imaging} |
- oscar | 2 | {tools,practice,data} |
paraclu | 2 | {cloud,bio} |
+ pbdagcon | 2 | {bio} |
placnet | 2 | {bio} |
plasmidid | 2 | {covid-19,bio} |
plasmidseeker | 2 | {bio} |
@@ -130,6 +128,8 @@ Last-Update: Sat, 20 Mar 2021 01:42:03 +0000
pscan-chip | 2 | {bio} |
rdp-classifier | 2 | {bio} |
rtax | 2 | {bio,cloud} |
+ runcircos-gui | 2 | {bio} |
+ saint | 2 | {bio} |
sambamba | 2 | {bio} |
segemehl | 2 | {bio} |
seq-gen | 2 | {bio} |
@@ -228,7 +228,6 @@ Last-Update: Sat, 20 Mar 2021 01:42:03 +0000
q2-sample-classifier | 0 | {bio-dev,bio} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
- sight | 0 | {imaging-dev} |
simpleitk | 0 | {imaging-dev} |
smrtanalysis | 0 | {covid-19,bio} |
vienna-rna | 0 | {covid-19,bio} |
@@ -236,5 +235,6 @@ Last-Update: Sat, 20 Mar 2021 01:42:03 +0000
xdffileio | 0 | {imaging-dev} |
mssstest | -1 | {tools} |
orthanc-python | -1 | {covid-19} |
+ sight | -1 | {imaging-dev} |
(266 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ae685cf55ba98714657932c49f7853320c81a347
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ae685cf55ba98714657932c49f7853320c81a347
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