Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
8576b863 by Andreas Tille at 2021-05-08T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,24 +1,24 @@
-Last-Update: Sat, 08 May 2021 01:42:04 +0000
+Last-Update: Sat, 08 May 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 186 | {covid-19,imaging} |
- orthanc | 93 | {practice,imaging,covid-19} |
- orthanc-wsi | 49 | {imaging,laboratory,practice,his,covid-19,oncology} |
- gdcm | 48 | {imaging-dev} |
- openslide | 39 | {imaging} |
+ orthanc | 95 | {practice,imaging,covid-19} |
+ orthanc-wsi | 52 | {imaging,laboratory,practice,his,covid-19,oncology} |
+ gdcm | 50 | {imaging-dev} |
+ openslide | 38 | {imaging} |
amide | 34 | {imaging} |
nipype | 31 | {imaging-dev,imaging} |
dicomscope | 29 | {imaging} |
- htsjdk | 28 | {bio-dev} |
+ htsjdk | 27 | {bio-dev} |
dicom3tools | 25 | {imaging} |
- dcm2niix | 20 | {imaging} |
- gdcm | 19 | {imaging-dev} |
- ngs-sdk | 17 | {bio-dev} |
+ dcm2niix | 22 | {imaging} |
+ gdcm | 18 | {imaging-dev} |
odin | 17 | {imaging-dev,imaging} |
- gdcm | 14 | {covid-19,imaging} |
+ gdcm | 16 | {covid-19,imaging} |
+ ngs-sdk | 16 | {bio-dev} |
+ gnumed-server | 14 | {covid-19,practice} |
invesalius | 14 | {imaging} |
- gnumed-server | 13 | {covid-19,practice} |
pixelmed | 13 | {imaging} |
dicomnifti | 12 | {imaging} |
nifticlib | 12 | {imaging} |
@@ -26,14 +26,14 @@ Last-Update: Sat, 08 May 2021 01:42:04 +0000
minc-tools | 11 | {imaging} |
orthanc-webviewer | 11 | {imaging} |
adun.app | 10 | {bio} |
- ngs-sdk | 10 | {bio-dev} |
- bamkit | 8 | {covid-19,bio} |
+ bamkit | 9 | {covid-19,bio} |
+ ngs-sdk | 9 | {bio-dev} |
ngs-sdk | 8 | {bio-dev} |
openslide | 8 | {imaging-dev} |
plastimatch | 8 | {imaging} |
vtk-dicom | 8 | {imaging} |
+ dicompyler | 7 | {oncology} |
mia | 7 | {imaging} |
- dicompyler | 6 | {oncology} |
king | 6 | {imaging,typesetting} |
librg-utils-perl | 6 | {bio} |
nifti2dicom | 6 | {imaging} |
@@ -43,27 +43,23 @@ Last-Update: Sat, 08 May 2021 01:42:04 +0000
orthanc-dicomweb | 5 | {imaging,covid-19} |
plasmidid | 5 | {covid-19,bio} |
rambo-k | 5 | {bio} |
- salmon | 5 | {bio,covid-19} |
staden | 5 | {bio} |
treeview | 5 | {bio,bio-phylogeny} |
blasr | 4 | {bio-ngs,bio} |
- embassy-domainatrix | 4 | {cloud,bio} |
- jellyfish1 | 4 | {bio} |
libminc | 4 | {imaging-dev} |
orthanc-mysql | 4 | {imaging} |
orthanc-postgresql | 4 | {imaging} |
oscar | 4 | {data,practice,tools} |
pymia | 4 | {imaging-dev} |
salmid | 4 | {bio} |
+ salmon | 4 | {bio,covid-19} |
stacks | 4 | {bio} |
- busco | 3 | {covid-19,bio} |
ea-utils | 3 | {bio} |
ecopcr | 3 | {bio} |
elastix | 3 | {imaging} |
- embassy-domalign | 3 | {bio,cloud} |
- embassy-domsearch | 3 | {bio,cloud} |
+ embassy-domainatrix | 3 | {cloud,bio} |
getdata | 3 | {bio} |
- lagan | 3 | {bio} |
+ jellyfish1 | 3 | {bio} |
pbdagcon | 3 | {bio} |
perm | 3 | {cloud,bio} |
saint | 3 | {bio} |
@@ -73,7 +69,11 @@ Last-Update: Sat, 08 May 2021 01:42:04 +0000
biojava-live | 2 | {bio-dev} |
blimps | 2 | {bio} |
brig | 2 | {bio} |
+ busco | 2 | {covid-19,bio} |
+ embassy-domalign | 2 | {bio,cloud} |
+ embassy-domsearch | 2 | {bio,cloud} |
fsm-lite | 2 | {bio} |
+ lagan | 2 | {bio} |
libdivsufsort | 2 | {bio-dev} |
metaphlan2 | 2 | {bio} |
nifticlib | 2 | {imaging-dev} |
@@ -84,7 +84,6 @@ Last-Update: Sat, 08 May 2021 01:42:04 +0000
piler | 2 | {bio} |
placnet | 2 | {bio} |
prime-phylo | 2 | {bio,cloud} |
- qcumber | 2 | {bio} |
runcircos-gui | 2 | {bio} |
sift | 2 | {bio} |
sight | 2 | {imaging} |
@@ -98,7 +97,6 @@ Last-Update: Sat, 08 May 2021 01:42:04 +0000
bitseq | 1 | {bio} |
cat-bat | 1 | {bio,covid-19} |
ctn | 1 | {imaging-dev} |
- cufflinks | 1 | {cloud,bio} |
emboss-explorer | 1 | {bio} |
estscan | 1 | {bio} |
fastml | 1 | {bio} |
@@ -121,6 +119,7 @@ Last-Update: Sat, 08 May 2021 01:42:04 +0000
papyrus | 1 | {imaging-dev} |
phast | 1 | {bio} |
proalign | 1 | {bio-phylogeny,bio} |
+ qcumber | 1 | {bio} |
rdp-alignment | 1 | {bio} |
rdp-classifier | 1 | {bio} |
rtax | 1 | {cloud,bio} |
@@ -143,6 +142,7 @@ Last-Update: Sat, 08 May 2021 01:42:04 +0000
canu | 0 | {bio} |
clonalframeml | 0 | {bio,covid-19} |
clonalorigin | 0 | {bio} |
+ cufflinks | 0 | {cloud,bio} |
delly | 0 | {bio,covid-19} |
dextractor | 0 | {covid-19,bio} |
eegdev | 0 | {imaging-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/8576b8634856df256a1385a956afba9ca9ed6331
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/8576b8634856df256a1385a956afba9ca9ed6331
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