[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Fri May 14 14:42:25 BST 2021



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
d96e9c2b by Andreas Tille at 2021-05-14T13:42:21+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,41 +1,41 @@
-Last-Update: Fri, 14 May 2021 01:42:03 +0000
+Last-Update: Fri, 14 May 2021 13:42:04 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    184 | {covid-19,imaging}                                  | 
+ dcmtk                         |    183 | {covid-19,imaging}                                  | 
  orthanc                       |     97 | {practice,imaging,covid-19}                         | 
  gdcm                          |     51 | {imaging-dev}                                       | 
  orthanc-wsi                   |     51 | {imaging,laboratory,practice,his,covid-19,oncology} | 
- amide                         |     32 | {imaging}                                           | 
+ amide                         |     33 | {imaging}                                           | 
  nipype                        |     30 | {imaging-dev,imaging}                               | 
- dicom3tools                   |     27 | {imaging}                                           | 
- dicomscope                    |     25 | {imaging}                                           | 
- htsjdk                        |     25 | {bio-dev}                                           | 
- openslide                     |     22 | {imaging}                                           | 
- dcm2niix                      |     20 | {imaging}                                           | 
- gdcm                          |     17 | {imaging-dev}                                       | 
+ dicom3tools                   |     28 | {imaging}                                           | 
+ htsjdk                        |     28 | {bio-dev}                                           | 
+ dicomscope                    |     24 | {imaging}                                           | 
+ openslide                     |     20 | {imaging}                                           | 
+ dcm2niix                      |     19 | {imaging}                                           | 
+ gdcm                          |     19 | {imaging-dev}                                       | 
  gdcm                          |     17 | {covid-19,imaging}                                  | 
  gnumed-server                 |     17 | {covid-19,practice}                                 | 
+ ngs-sdk                       |     17 | {bio-dev}                                           | 
  odin                          |     17 | {imaging-dev,imaging}                               | 
- ngs-sdk                       |     15 | {bio-dev}                                           | 
+ invesalius                    |     14 | {imaging}                                           | 
+ pixelmed                      |     14 | {imaging}                                           | 
+ minc-tools                    |     13 | {imaging}                                           | 
  nifticlib                     |     13 | {imaging}                                           | 
  orthanc-webviewer             |     13 | {imaging}                                           | 
- pixelmed                      |     13 | {imaging}                                           | 
  dicomnifti                    |     12 | {imaging}                                           | 
  insighttoolkit4               |     12 | {imaging-dev}                                       | 
- invesalius                    |     12 | {imaging}                                           | 
- minc-tools                    |     12 | {imaging}                                           | 
- ngs-sdk                       |      9 | {bio-dev}                                           | 
+ ngs-sdk                       |     11 | {bio-dev}                                           | 
  plastimatch                   |      9 | {imaging}                                           | 
  adun.app                      |      8 | {bio}                                               | 
- bamkit                        |      8 | {covid-19,bio}                                      | 
- dicompyler                    |      8 | {oncology}                                          | 
  ngs-sdk                       |      8 | {bio-dev}                                           | 
- openslide                     |      8 | {imaging-dev}                                       | 
  vtk-dicom                     |      8 | {imaging}                                           | 
+ bamkit                        |      7 | {covid-19,bio}                                      | 
+ dicompyler                    |      7 | {oncology}                                          | 
+ king                          |      7 | {imaging,typesetting}                               | 
  mia                           |      7 | {imaging}                                           | 
  nifti2dicom                   |      7 | {imaging}                                           | 
- king                          |      6 | {imaging,typesetting}                               | 
+ openslide                     |      7 | {imaging-dev}                                       | 
  orthanc-dicomweb              |      6 | {imaging,covid-19}                                  | 
  libminc                       |      5 | {imaging-dev}                                       | 
  orthanc-mysql                 |      5 | {imaging}                                           | 
@@ -53,16 +53,17 @@ Last-Update: Fri, 14 May 2021 01:42:03 +0000
  blasr                         |      3 | {bio-ngs,bio}                                       | 
  ea-utils                      |      3 | {bio}                                               | 
  elastix                       |      3 | {imaging}                                           | 
+ embassy-domainatrix           |      3 | {cloud,bio}                                         | 
  getdata                       |      3 | {bio}                                               | 
+ jellyfish1                    |      3 | {bio}                                               | 
  nifticlib                     |      3 | {imaging-dev}                                       | 
  oscar                         |      3 | {data,practice,tools}                               | 
  plasmidid                     |      3 | {covid-19,bio}                                      | 
- rambo-k                       |      3 | {bio}                                               | 
  stacks                        |      3 | {bio}                                               | 
  blimps                        |      2 | {bio}                                               | 
  ecopcr                        |      2 | {bio}                                               | 
- embassy-domainatrix           |      2 | {cloud,bio}                                         | 
- jellyfish1                    |      2 | {bio}                                               | 
+ embassy-domalign              |      2 | {bio,cloud}                                         | 
+ embassy-domsearch             |      2 | {bio,cloud}                                         | 
  lagan                         |      2 | {bio}                                               | 
  libdivsufsort                 |      2 | {bio-dev}                                           | 
  obitools                      |      2 | {bio}                                               | 
@@ -70,6 +71,8 @@ Last-Update: Fri, 14 May 2021 01:42:03 +0000
  orthanc-gdcm                  |      2 | {imaging}                                           | 
  pbdagcon                      |      2 | {bio}                                               | 
  perm                          |      2 | {cloud,bio}                                         | 
+ qcumber                       |      2 | {bio}                                               | 
+ rambo-k                       |      2 | {bio}                                               | 
  runcircos-gui                 |      2 | {bio}                                               | 
  saint                         |      2 | {bio}                                               | 
  sibsim4                       |      2 | {cloud,bio}                                         | 
@@ -85,8 +88,7 @@ Last-Update: Fri, 14 May 2021 01:42:03 +0000
  brig                          |      1 | {bio}                                               | 
  cat-bat                       |      1 | {bio,covid-19}                                      | 
  ctn                           |      1 | {imaging-dev}                                       | 
- embassy-domalign              |      1 | {bio,cloud}                                         | 
- embassy-domsearch             |      1 | {bio,cloud}                                         | 
+ cufflinks                     |      1 | {cloud,bio}                                         | 
  estscan                       |      1 | {bio}                                               | 
  fsm-lite                      |      1 | {bio}                                               | 
  ghmm                          |      1 | {bio}                                               | 
@@ -103,7 +105,6 @@ Last-Update: Fri, 14 May 2021 01:42:03 +0000
  piler                         |      1 | {bio}                                               | 
  placnet                       |      1 | {bio}                                               | 
  prime-phylo                   |      1 | {bio,cloud}                                         | 
- qcumber                       |      1 | {bio}                                               | 
  simpleitk                     |      1 | {imaging-dev}                                       | 
  spaced                        |      1 | {bio}                                               | 
  spread-phy                    |      1 | {bio-phylogeny,bio}                                 | 
@@ -124,7 +125,6 @@ Last-Update: Fri, 14 May 2021 01:42:03 +0000
  canu                          |      0 | {bio}                                               | 
  clonalframeml                 |      0 | {bio,covid-19}                                      | 
  clonalorigin                  |      0 | {bio}                                               | 
- cufflinks                     |      0 | {cloud,bio}                                         | 
  delly                         |      0 | {bio,covid-19}                                      | 
  dextractor                    |      0 | {covid-19,bio}                                      | 
  eegdev                        |      0 | {imaging-dev}                                       | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d96e9c2b754b7e5ce97de4aebd081e475f3cdef2

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d96e9c2b754b7e5ce97de4aebd081e475f3cdef2
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