Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
9cbfc87b by Andreas Tille at 2021-05-16T13:42:18+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,48 +1,47 @@
-Last-Update: Sun, 16 May 2021 01:42:03 +0000
+Last-Update: Sun, 16 May 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 181 | {covid-19,imaging} |
orthanc | 96 | {practice,imaging,covid-19} |
- gdcm | 51 | {imaging-dev} |
orthanc-wsi | 50 | {imaging,laboratory,practice,his,covid-19,oncology} |
- amide | 34 | {imaging} |
+ gdcm | 48 | {imaging-dev} |
+ amide | 33 | {imaging} |
nipype | 30 | {imaging-dev,imaging} |
dicom3tools | 29 | {imaging} |
htsjdk | 28 | {bio-dev} |
- dicomscope | 25 | {imaging} |
- dcm2niix | 21 | {imaging} |
+ dicomscope | 24 | {imaging} |
+ dcm2niix | 22 | {imaging} |
openslide | 21 | {imaging} |
- gdcm | 19 | {covid-19,imaging} |
- gdcm | 19 | {imaging-dev} |
+ gdcm | 20 | {imaging-dev} |
+ gdcm | 20 | {covid-19,imaging} |
odin | 18 | {imaging-dev,imaging} |
gnumed-server | 17 | {covid-19,practice} |
- ngs-sdk | 16 | {bio-dev} |
pixelmed | 16 | {imaging} |
invesalius | 15 | {imaging} |
- minc-tools | 15 | {imaging} |
- nifticlib | 15 | {imaging} |
- dicomnifti | 13 | {imaging} |
+ ngs-sdk | 15 | {bio-dev} |
+ minc-tools | 13 | {imaging} |
+ nifticlib | 13 | {imaging} |
orthanc-webviewer | 13 | {imaging} |
+ dicomnifti | 12 | {imaging} |
insighttoolkit4 | 12 | {imaging-dev} |
plastimatch | 11 | {imaging} |
vtk-dicom | 10 | {imaging} |
king | 9 | {imaging,typesetting} |
mia | 9 | {imaging} |
ngs-sdk | 9 | {bio-dev} |
- adun.app | 8 | {bio} |
ngs-sdk | 8 | {bio-dev} |
- nifti2dicom | 8 | {imaging} |
+ adun.app | 7 | {bio} |
bamkit | 7 | {covid-19,bio} |
dicompyler | 7 | {oncology} |
openslide | 7 | {imaging-dev} |
+ nifti2dicom | 6 | {imaging} |
orthanc-dicomweb | 6 | {imaging,covid-19} |
bart-view | 5 | {imaging} |
libminc | 5 | {imaging-dev} |
orthanc-mysql | 5 | {imaging} |
orthanc-postgresql | 5 | {imaging} |
salmid | 5 | {bio} |
- staden | 5 | {bio} |
busco | 4 | {covid-19,bio} |
jebl2 | 4 | {bio-dev} |
librg-utils-perl | 4 | {bio} |
@@ -50,6 +49,7 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
pymia | 4 | {imaging-dev} |
salmon | 4 | {bio,covid-19} |
stacks | 4 | {bio} |
+ staden | 4 | {bio} |
treeview | 4 | {bio,bio-phylogeny} |
blasr | 3 | {bio-ngs,bio} |
ea-utils | 3 | {bio} |
@@ -58,7 +58,6 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
getdata | 3 | {bio} |
jellyfish1 | 3 | {bio} |
nifticlib | 3 | {imaging-dev} |
- opencfu | 3 | {laboratory} |
oscar | 3 | {data,practice,tools} |
plasmidid | 3 | {covid-19,bio} |
blimps | 2 | {bio} |
@@ -69,6 +68,7 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
libdivsufsort | 2 | {bio-dev} |
libsbml | 2 | {bio-dev} |
obitools | 2 | {bio} |
+ opencfu | 2 | {laboratory} |
orthanc-gdcm | 2 | {imaging} |
papyrus | 2 | {imaging-dev} |
pbdagcon | 2 | {bio} |
@@ -85,20 +85,19 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
anfo | 1 | {cloud,bio} |
beast-mcmc | 1 | {bio,bio-phylogeny} |
biojava-live | 1 | {bio-dev} |
+ biomaj3-cli | 1 | {cloud} |
bio-tradis | 1 | {bio-dev,bio} |
bitseq | 1 | {bio} |
brig | 1 | {bio} |
cat-bat | 1 | {bio,covid-19} |
ctn | 1 | {imaging-dev} |
cufflinks | 1 | {cloud,bio} |
- eegdev | 1 | {imaging-dev} |
estscan | 1 | {bio} |
fsm-lite | 1 | {bio} |
ghmm | 1 | {bio} |
lamarc | 1 | {bio} |
libctapimkt | 1 | {practice} |
libmuscle | 1 | {bio-dev} |
- libpal-java | 1 | {bio-dev} |
metaphlan2 | 1 | {bio} |
orthanc-python | 1 | {covid-19} |
paraclu | 1 | {bio,cloud} |
@@ -113,14 +112,12 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
suitename | 1 | {bio} |
varna | 1 | {bio} |
vienna-rna | 1 | {covid-19,bio} |
- vtk-dicom | 1 | {imaging-dev} |
arden | 0 | {bio,cloud} |
assemblytics | 0 | {bio} |
atropos | 0 | {bio} |
bambamc | 0 | {bio-dev} |
bbmap | 0 | {bio,covid-19} |
biojava4-live | 0 | {bio-dev} |
- biomaj3-cli | 0 | {cloud} |
biosyntax | 0 | {bio} |
bmtk | 0 | {psychology} |
bustools | 0 | {bio,covid-19} |
@@ -130,12 +127,13 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
clonalorigin | 0 | {bio} |
delly | 0 | {bio,covid-19} |
dextractor | 0 | {covid-19,bio} |
+ eegdev | 0 | {imaging-dev} |
emboss-explorer | 0 | {bio} |
emmax | 0 | {bio} |
fastml | 0 | {bio} |
fis-gtm | 0 | {his} |
- gatb-core | 0 | {bio-dev} |
gatb-core | 0 | {bio} |
+ gatb-core | 0 | {bio-dev} |
gifticlib | 0 | {imaging-dev} |
hinge | 0 | {bio} |
htscodecs | 0 | {covid-19,bio-dev} |
@@ -164,8 +162,9 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
libmaus2 | 0 | {bio-dev,covid-19} |
libmems | 0 | {bio-dev} |
libmialm | 0 | {imaging-dev} |
- libncl | 0 | {bio-dev} |
libncl | 0 | {bio} |
+ libncl | 0 | {bio-dev} |
+ libpal-java | 0 | {bio-dev} |
libpsortb | 0 | {bio-dev} |
libqes | 0 | {bio-dev} |
librdp-taxonomy-tree-java | 0 | {bio-dev} |
@@ -233,6 +232,7 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
trace2dbest | 0 | {bio} |
tvc | 0 | {bio} |
varscan | 0 | {covid-19,bio} |
+ vtk-dicom | 0 | {imaging-dev} |
xdffileio | 0 | {imaging-dev} |
yaha | 0 | {bio} |
yanagiba | 0 | {bio,covid-19} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9cbfc87b2e05f7c255b3ff91a013033dcfb18714
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9cbfc87b2e05f7c255b3ff91a013033dcfb18714
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