Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
da11dc12 by Andreas Tille at 2021-05-23T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,62 +1,63 @@
-Last-Update: Sun, 23 May 2021 01:42:03 +0000
+Last-Update: Sun, 23 May 2021 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 182 | {covid-19,imaging} |
+ dcmtk | 183 | {covid-19,imaging} |
orthanc | 96 | {practice,imaging,covid-19} |
- gdcm | 53 | {imaging-dev} |
- orthanc-wsi | 49 | {imaging,laboratory,practice,his,covid-19,oncology} |
- amide | 30 | {imaging} |
+ gdcm | 55 | {imaging-dev} |
+ orthanc-wsi | 50 | {imaging,laboratory,practice,his,covid-19,oncology} |
nipype | 30 | {imaging-dev,imaging} |
- dicom3tools | 29 | {imaging} |
+ amide | 29 | {imaging} |
+ dicom3tools | 28 | {imaging} |
htsjdk | 28 | {bio-dev} |
dicomscope | 26 | {imaging} |
dcm2niix | 23 | {imaging} |
gdcm | 21 | {covid-19,imaging} |
gdcm | 20 | {imaging-dev} |
- openslide | 19 | {imaging} |
+ openslide | 18 | {imaging} |
odin | 17 | {imaging-dev,imaging} |
- gnumed-server | 16 | {covid-19,practice} |
- minc-tools | 15 | {imaging} |
+ gnumed-server | 15 | {covid-19,practice} |
ngs-sdk | 15 | {bio-dev} |
invesalius | 14 | {imaging} |
- nifticlib | 14 | {imaging} |
+ minc-tools | 14 | {imaging} |
orthanc-webviewer | 14 | {imaging} |
pixelmed | 14 | {imaging} |
- dicomnifti | 13 | {imaging} |
+ nifticlib | 13 | {imaging} |
+ dicomnifti | 12 | {imaging} |
+ ngs-sdk | 11 | {bio-dev} |
plastimatch | 11 | {imaging} |
- ngs-sdk | 10 | {bio-dev} |
vtk-dicom | 10 | {imaging} |
insighttoolkit4 | 9 | {imaging-dev} |
king | 9 | {imaging,typesetting} |
mia | 9 | {imaging} |
- openslide | 9 | {imaging-dev} |
- nifti2dicom | 8 | {imaging} |
+ openslide | 8 | {imaging-dev} |
adun.app | 7 | {bio} |
bamkit | 7 | {covid-19,bio} |
dicompyler | 7 | {oncology} |
ngs-sdk | 7 | {bio-dev} |
nifti2dicom | 7 | {imaging} |
+ nifti2dicom | 6 | {imaging} |
orthanc-dicomweb | 6 | {imaging,covid-19} |
bart-view | 5 | {imaging} |
busco | 5 | {covid-19,bio} |
+ libminc | 5 | {imaging-dev} |
melting | 5 | {bio,cloud} |
orthanc-mysql | 5 | {imaging} |
orthanc-postgresql | 5 | {imaging} |
salmid | 5 | {bio} |
jebl2 | 4 | {bio-dev} |
- libminc | 4 | {imaging-dev} |
librg-utils-perl | 4 | {bio} |
+ oscar | 4 | {data,practice,tools} |
salmon | 4 | {bio,covid-19} |
- stacks | 4 | {bio} |
treeview | 4 | {bio,bio-phylogeny} |
elastix | 3 | {imaging} |
getdata | 3 | {bio} |
jellyfish1 | 3 | {bio} |
lagan | 3 | {bio} |
- oscar | 3 | {data,practice,tools} |
+ nifticlib | 3 | {imaging-dev} |
pymia | 3 | {imaging-dev} |
runcircos-gui | 3 | {bio} |
+ stacks | 3 | {bio} |
staden | 3 | {bio} |
tracetuner | 3 | {bio} |
biojava-live | 2 | {bio-dev} |
@@ -72,7 +73,6 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
ghmm | 2 | {bio} |
lamarc | 2 | {bio} |
libsbml | 2 | {bio-dev} |
- nifticlib | 2 | {imaging-dev} |
obitools | 2 | {bio} |
orthanc-gdcm | 2 | {imaging} |
papyrus | 2 | {imaging-dev} |
@@ -99,6 +99,7 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
libctapimkt | 1 | {practice} |
libdivsufsort | 1 | {bio-dev} |
libncl | 1 | {bio} |
+ libvistaio | 1 | {imaging-dev} |
logol | 1 | {bio} |
mauve-aligner | 1 | {bio} |
metaphlan2 | 1 | {bio} |
@@ -116,6 +117,7 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
quorum | 1 | {bio} |
rambo-k | 1 | {bio} |
saint | 1 | {bio} |
+ samtools-legacy | 1 | {bio-dev} |
segemehl | 1 | {bio} |
sibsim4 | 1 | {cloud,bio} |
simpleitk | 1 | {imaging-dev} |
@@ -173,7 +175,6 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
librdp-taxonomy-tree-java | 0 | {bio-dev} |
libseqlib | 0 | {bio-dev} |
libstatgen | 0 | {bio-dev} |
- libvistaio | 0 | {imaging-dev} |
libxdf | 0 | {imaging-dev} |
metastudent-data | 0 | {bio} |
metastudent-data-2 | 0 | {bio} |
@@ -199,8 +200,8 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
proalign | 0 | {bio-phylogeny,bio} |
pscan-chip | 0 | {bio} |
python-epimodels | 0 | {epi} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio} |
python-wdlparse | 0 | {bio-dev} |
q2-sample-classifier | 0 | {bio,bio-dev} |
rdp-alignment | 0 | {bio} |
@@ -209,7 +210,6 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
rtax | 0 | {cloud,bio} |
sambamba | 0 | {bio} |
samblaster | 0 | {covid-19,bio} |
- samtools-legacy | 0 | {bio-dev} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
sga | 0 | {bio} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/da11dc12d759098cfd9cd9f362ceff53913077eb
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/da11dc12d759098cfd9cd9f362ceff53913077eb
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