[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Wed May 26 14:42:25 BST 2021



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
d40417a4 by Andreas Tille at 2021-05-26T13:42:22+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,48 +1,46 @@
-Last-Update: Wed, 26 May 2021 01:42:04 +0000
+Last-Update: Wed, 26 May 2021 13:42:04 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    178 | {imaging,covid-19}                                  | 
- orthanc                       |     94 | {practice,imaging,covid-19}                         | 
+ dcmtk                         |    172 | {imaging,covid-19}                                  | 
+ orthanc                       |     91 | {practice,imaging,covid-19}                         | 
  gdcm                          |     50 | {imaging-dev}                                       | 
- orthanc-wsi                   |     49 | {oncology,his,imaging,covid-19,practice,laboratory} | 
- amide                         |     29 | {imaging}                                           | 
+ orthanc-wsi                   |     48 | {oncology,his,imaging,covid-19,practice,laboratory} | 
  dicom3tools                   |     29 | {imaging}                                           | 
  htsjdk                        |     29 | {bio-dev}                                           | 
- nipype                        |     28 | {imaging,imaging-dev}                               | 
+ amide                         |     28 | {imaging}                                           | 
  dicomscope                    |     27 | {imaging}                                           | 
+ nipype                        |     27 | {imaging,imaging-dev}                               | 
  dcm2niix                      |     21 | {imaging}                                           | 
  gdcm                          |     20 | {imaging,covid-19}                                  | 
+ gdcm                          |     20 | {imaging-dev}                                       | 
  openslide                     |     20 | {imaging}                                           | 
- gdcm                          |     19 | {imaging-dev}                                       | 
- odin                          |     17 | {imaging-dev,imaging}                               | 
- gnumed-server                 |     16 | {covid-19,practice}                                 | 
  minc-tools                    |     16 | {imaging}                                           | 
+ odin                          |     16 | {imaging-dev,imaging}                               | 
+ gnumed-server                 |     15 | {covid-19,practice}                                 | 
+ invesalius                    |     14 | {imaging}                                           | 
  nifticlib                     |     14 | {imaging}                                           | 
- invesalius                    |     13 | {imaging}                                           | 
  orthanc-webviewer             |     13 | {imaging}                                           | 
  dicomnifti                    |     12 | {imaging}                                           | 
  ngs-sdk                       |     12 | {bio-dev}                                           | 
  pixelmed                      |     12 | {imaging}                                           | 
  plastimatch                   |     10 | {imaging}                                           | 
  vtk-dicom                     |     10 | {imaging}                                           | 
+ insighttoolkit4               |      9 | {imaging-dev}                                       | 
  king                          |      9 | {imaging,typesetting}                               | 
- mia                           |      9 | {imaging}                                           | 
  ngs-sdk                       |      9 | {bio-dev}                                           | 
- insighttoolkit4               |      8 | {imaging-dev}                                       | 
- ngs-sdk                       |      8 | {bio-dev}                                           | 
+ adun.app                      |      8 | {bio}                                               | 
+ mia                           |      8 | {imaging}                                           | 
  nifti2dicom                   |      8 | {imaging}                                           | 
  openslide                     |      8 | {imaging-dev}                                       | 
- adun.app                      |      7 | {bio}                                               | 
  bamkit                        |      7 | {bio,covid-19}                                      | 
  dicompyler                    |      7 | {oncology}                                          | 
  nifti2dicom                   |      7 | {imaging}                                           | 
  bart-view                     |      5 | {imaging}                                           | 
  busco                         |      5 | {covid-19,bio}                                      | 
- libminc                       |      5 | {imaging-dev}                                       | 
  melting                       |      5 | {cloud,bio}                                         | 
  orthanc-dicomweb              |      5 | {imaging,covid-19}                                  | 
- orthanc-mysql                 |      4 | {imaging}                                           | 
+ libminc                       |      4 | {imaging-dev}                                       | 
  orthanc-postgresql            |      4 | {imaging}                                           | 
  oscar                         |      4 | {tools,practice,data}                               | 
  pymia                         |      4 | {imaging-dev}                                       | 
@@ -56,7 +54,9 @@ Last-Update: Wed, 26 May 2021 01:42:04 +0000
  jellyfish1                    |      3 | {bio}                                               | 
  lagan                         |      3 | {bio}                                               | 
  librg-utils-perl              |      3 | {bio}                                               | 
+ libsbml                       |      3 | {bio-dev}                                           | 
  nifticlib                     |      3 | {imaging-dev}                                       | 
+ orthanc-mysql                 |      3 | {imaging}                                           | 
  runcircos-gui                 |      3 | {bio}                                               | 
  stacks                        |      3 | {bio}                                               | 
  staden                        |      3 | {bio}                                               | 
@@ -71,7 +71,6 @@ Last-Update: Wed, 26 May 2021 01:42:04 +0000
  embassy-domalign              |      2 | {cloud,bio}                                         | 
  ghmm                          |      2 | {bio}                                               | 
  lamarc                        |      2 | {bio}                                               | 
- libsbml                       |      2 | {bio-dev}                                           | 
  logol                         |      2 | {bio}                                               | 
  obitools                      |      2 | {bio}                                               | 
  orthanc-gdcm                  |      2 | {imaging}                                           | 
@@ -97,7 +96,6 @@ Last-Update: Wed, 26 May 2021 01:42:04 +0000
  fastml                        |      1 | {bio}                                               | 
  intake                        |      1 | {bio-dev,bio}                                       | 
  ipig                          |      1 | {bio}                                               | 
- libctapimkt                   |      1 | {practice}                                          | 
  libdivsufsort                 |      1 | {bio-dev}                                           | 
  libmuscle                     |      1 | {bio-dev}                                           | 
  libncl                        |      1 | {bio}                                               | 
@@ -118,6 +116,7 @@ Last-Update: Wed, 26 May 2021 01:42:04 +0000
  quorum                        |      1 | {bio}                                               | 
  rambo-k                       |      1 | {bio}                                               | 
  saint                         |      1 | {bio}                                               | 
+ sambamba                      |      1 | {bio}                                               | 
  samtools-legacy               |      1 | {bio-dev}                                           | 
  segemehl                      |      1 | {bio}                                               | 
  sibsim4                       |      1 | {cloud,bio}                                         | 
@@ -160,6 +159,7 @@ Last-Update: Wed, 26 May 2021 01:42:04 +0000
  libbpp-seq                    |      0 | {bio-dev}                                           | 
  libbpp-seq-omics              |      0 | {bio-dev}                                           | 
  libchado-perl                 |      0 | {bio-dev}                                           | 
+ libctapimkt                   |      0 | {practice}                                          | 
  libdisorder                   |      0 | {bio-dev}                                           | 
  libgenome                     |      0 | {bio-dev}                                           | 
  libgkarrays                   |      0 | {bio-dev}                                           | 
@@ -209,7 +209,6 @@ Last-Update: Wed, 26 May 2021 01:42:04 +0000
  rdp-classifier                |      0 | {bio}                                               | 
  resfinder-db                  |      0 | {bio}                                               | 
  rtax                          |      0 | {cloud,bio}                                         | 
- sambamba                      |      0 | {bio}                                               | 
  samblaster                    |      0 | {bio,covid-19}                                      | 
  sbmltoolbox                   |      0 | {bio-dev}                                           | 
  seq-gen                       |      0 | {bio}                                               | 
@@ -240,5 +239,5 @@ Last-Update: Wed, 26 May 2021 01:42:04 +0000
  zalign                        |      0 | {cloud,bio}                                         | 
  mssstest                      |     -1 | {tools}                                             | 
  sight                         |     -1 | {imaging-dev}                                       | 
-(270 rows)
+(269 rows)
 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d40417a4f03209255579fe04f014d1a87ba7125c

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/d40417a4f03209255579fe04f014d1a87ba7125c
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