[med-svn] [Git][med-team/skesa][master] 2 commits: Versioned Build-Depends: libncbi-vdb-dev (>= 2.11.2+dfsg-2)

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / skesa


Commits:
87f7bf16 by Andreas Tille at 2021-11-01T17:12:12+01:00
Versioned Build-Depends: libncbi-vdb-dev (>= 2.11.2+dfsg-2)

- - - - -
6fc4e896 by Andreas Tille at 2021-11-01T17:15:29+01:00
Upload to unstable

- - - - -


4 changed files:

- debian/changelog
- debian/control
- debian/patches/hardening.patch
- debian/patches/use_debian_packaged_ngs-sdk.patch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,10 @@
+skesa (2.4.0-3) unstable; urgency=medium
+
+  * Versioned Build-Depends: libncbi-vdb-dev (>= 2.11.2+dfsg-2)
+    Closes: #997294
+
+ -- Andreas Tille <tille at debian.org>  Mon, 01 Nov 2021 17:12:21 +0100
+
 skesa (2.4.0-2) unstable; urgency=medium
 
   * Fix watchfile to detect new versions on github


=====================================
debian/control
=====================================
@@ -11,7 +11,7 @@ Build-Depends: debhelper-compat (= 13),
                libboost-regex-dev,
                libboost-system-dev,
                libboost-timer-dev,
-               libncbi-vdb-dev (>= 2.10.5),
+               libncbi-vdb-dev (>= 2.11.2+dfsg-2),
                libngs-sdk-dev
 Standards-Version: 4.6.0
 Vcs-Browser: https://salsa.debian.org/med-team/skesa


=====================================
debian/patches/hardening.patch
=====================================
@@ -16,7 +16,7 @@ Index: skesa/Makefile
  
 -LIBS = $(VDB_LIB) -lncbi-ngs-c++ -lncbi-vdb \
 +LIBS += $(VDB_LIB) -lncbi-ngs-c++ -lncbi-vdb \
-        $(NGS_LIB) -lngs-c++ \
+        $(NGS_LIB) -lngs-c++ -lzstd \
         -Wl,-Bstatic $(BOOST_LIB) \
         -lboost_program_options \
 @@ -70,7 +70,7 @@ glb_align.o: glb_align.hpp Makefile


=====================================
debian/patches/use_debian_packaged_ngs-sdk.patch
=====================================
@@ -13,7 +13,7 @@ Index: skesa/Makefile
 -LIBS = $(VDB_LIB) -lncbi-ngs-c++-static -lncbi-vdb-static \
 -       $(NGS_LIB) -lngs-c++-static \
 +LIBS = $(VDB_LIB) -lncbi-ngs-c++ -lncbi-vdb \
-+       $(NGS_LIB) -lngs-c++ \
++       $(NGS_LIB) -lngs-c++ -lzstd \
         -Wl,-Bstatic $(BOOST_LIB) \
         -lboost_program_options \
         -lboost_iostreams \



View it on GitLab: https://salsa.debian.org/med-team/skesa/-/compare/a4fdcf4e15f65190c779c2c588dd2525b546c27b...6fc4e8964a57b4f16fcb27c9eac15075e0f91b91

-- 
View it on GitLab: https://salsa.debian.org/med-team/skesa/-/compare/a4fdcf4e15f65190c779c2c588dd2525b546c27b...6fc4e8964a57b4f16fcb27c9eac15075e0f91b91
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