[med-svn] [Git][med-team/stacks][master] 4 commits: New upstream version 2.60+dfsg

[Nilesh Patra (@nilesh)]

Nilesh Patra pushed to branch master at Debian Med / stacks


Commits:
e5daa10b by Nilesh Patra at 2021-11-02T00:10:18+05:30
New upstream version 2.60+dfsg
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df7271e1 by Nilesh Patra at 2021-11-02T00:10:18+05:30
Run cme

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5823025f by Nilesh Patra at 2021-11-02T00:10:18+05:30
Re-diff patches

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3e0a1f35 by Nilesh Patra at 2021-11-02T00:10:18+05:30
Upload to unstable

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23 changed files:

- ChangeLog
- Makefile.am
- configure.ac
- debian/changelog
- debian/control
- debian/patches/script-exe-paths
- debian/patches/use_debian_packaged_htslib.patch
- scripts/denovo_map.pl
- scripts/ref_map.pl
- scripts/stacks-integrate-alignments
- src/PopSum.cc
- src/PopSum.h
- src/Seq.h
- + src/bootstrap.cc
- src/bootstrap.h
- src/clean.cc
- src/clone_filter.cc
- src/constants.h
- src/cstacks.cc
- src/export_formats.cc
- src/export_formats.h
- src/gstacks.cc
- src/ordered.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/stacks/-/compare/0961ada8792b0b977de617332d725713f8f0a0fc...3e0a1f35bd7d5ab2033ea7b3f9b51e9ffdd5eba8

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View it on GitLab: https://salsa.debian.org/med-team/stacks/-/compare/0961ada8792b0b977de617332d725713f8f0a0fc...3e0a1f35bd7d5ab2033ea7b3f9b51e9ffdd5eba8
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