[med-svn] [Git][med-team/discosnp][upstream] New upstream version 2.5.4

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / discosnp


Commits:
59edc4e4 by Andreas Tille at 2021-11-09T18:24:20+01:00
New upstream version 2.5.4
- - - - -


19 changed files:

- CMakeLists.txt
- + RELEASE.md
- discoSnpRAD/README.md
- discoSnpRAD/run_discoSnpRad.sh
- run_discoSnp++.sh
- run_discoSnp++_ML.sh
- − run_discoSnp++_storagefile.sh
- scripts/VCF_creator.py
- scripts/k3000/K3000.py
- scripts/k3000/K3000_common.py
- − scripts/k3000/K3000_compacted_int_to_fa.py
- − scripts/k3000/K3000_compacted_paths_to_fa.py
- scripts/k3000/K3000_enhance_gfa.py
- + scripts/k3000/K3000_fact_haplotypes_to_localized_variant_ids.py
- + scripts/k3000/K3000_facts_to_fa.py
- + scripts/k3000/K3000_facts_to_gfa.py
- scripts/k3000/K3000_find_unitig_connected_pairs_of_facts.py
- scripts/k3000/K3000_gfa_post_treatment.py
- scripts/k3000/K3000_gfa_to_dat.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/discosnp/-/commit/59edc4e46f02b686d4da0873455115a858d82b4e

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View it on GitLab: https://salsa.debian.org/med-team/discosnp/-/commit/59edc4e46f02b686d4da0873455115a858d82b4e
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