[med-svn] [Git][med-team/phast][master] 3 commits: Close bugs, DEP3

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / phast


Commits:
033a945c by Andreas Tille at 2021-11-19T13:17:44+01:00
Close bugs, DEP3

- - - - -
504be9d0 by Andreas Tille at 2021-11-19T13:20:00+01:00
Upload to unstable

- - - - -
d8241bb6 by Andreas Tille at 2021-11-19T14:09:17+01:00
Forward patches

- - - - -


4 changed files:

- debian/changelog
- debian/patches/clapack.patch
- debian/patches/fix_test_makefile.patch
- debian/patches/pcre2.patch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,8 +1,9 @@
-phast (1.6+dfsg-3) UNRELEASED; urgency=medium
+phast (1.6+dfsg-3) unstable; urgency=medium
 
   * Port to pcre2
+    Closes: #1000000, #1000163
 
- -- Andreas Tille <tille at debian.org>  Thu, 18 Nov 2021 17:43:05 +0100
+ -- Andreas Tille <tille at debian.org>  Fri, 19 Nov 2021 13:17:54 +0100
 
 phast (1.6+dfsg-2) unstable; urgency=medium
 


=====================================
debian/patches/clapack.patch
=====================================
@@ -7,6 +7,8 @@ Description: Use Debian package for BLAS/LAPACK (instead of obsolete clapack)
  - Do not use f2c, not needed
  - Introduce prototypes for LAPACK functions used in the package
    (those are documented in the manpages from the liblapack-doc package)
+Forwarded: https://github.com/CshlSiepelLab/phast/issues/48
+
 --- a/src/lib/Makefile
 +++ b/src/lib/Makefile
 @@ -12,29 +12,9 @@ endif


=====================================
debian/patches/fix_test_makefile.patch
=====================================
@@ -5,6 +5,7 @@ Description: Test suite makefile has syntax errors and there
  .
  With these changes `make msa_view` works but other targets are
  throwing errors.  This needs to be investigated
+Forwarded: https://github.com/CshlSiepelLab/phast/issues/47
 
 --- a/test/Makefile
 +++ b/test/Makefile


=====================================
debian/patches/pcre2.patch
=====================================
@@ -1,3 +1,9 @@
+Description: Port from pcre3 to pcre2
+Bug-Debian: https://bugs.debian.org/1000000
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Fri, 19 Nov 2021 13:12:51 +0100
+Forwarded: https://github.com/CshlSiepelLab/phast/issues/49
+
 --- a/include/phast/stringsplus.h
 +++ b/include/phast/stringsplus.h
 @@ -24,7 +24,8 @@



View it on GitLab: https://salsa.debian.org/med-team/phast/-/compare/b829d862de1622cab13628b79414e3e52b8e9ca1...d8241bb6e1d925b1b2d23a6d9ab1278edb809026

-- 
View it on GitLab: https://salsa.debian.org/med-team/phast/-/compare/b829d862de1622cab13628b79414e3e52b8e9ca1...d8241bb6e1d925b1b2d23a6d9ab1278edb809026
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