[med-svn] [Git][med-team/pbdagcon][master] 4 commits: Fix FTCBFS
Nilesh Patra (@nilesh)
gitlab at salsa.debian.org
Sun Nov 21 10:48:10 GMT 2021
Nilesh Patra pushed to branch master at Debian Med / pbdagcon
Commits:
d4bf42d0 by Nilesh Patra at 2021-11-21T15:59:14+05:30
Fix FTCBFS
- - - - -
56acfdfd by Nilesh Patra at 2021-11-21T16:05:45+05:30
Do not override compiler flags in tests either
- - - - -
8e069462 by Nilesh Patra at 2021-11-21T16:06:42+05:30
Disable CI on i386
- - - - -
23b6a3ae by Nilesh Patra at 2021-11-21T16:07:39+05:30
Upload to unstable
- - - - -
4 changed files:
- debian/changelog
- debian/control
- debian/patches/compiler-flags.patch
- debian/salsa-ci.yml
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+pbdagcon (0.3+git20180411.c14c422+dfsg-5) unstable; urgency=medium
+
+ * Team upload.
+ * Fix FTCBFS (Closes: #983630)
+ * Do not override compiler flags in tests either
+ * Disable CI on i386
+
+ -- Nilesh Patra <nilesh at debian.org> Sun, 21 Nov 2021 16:07:06 +0530
+
pbdagcon (0.3+git20180411.c14c422+dfsg-4) unstable; urgency=medium
* Team Upload.
=====================================
debian/control
=====================================
@@ -5,7 +5,7 @@ Uploaders: Andreas Tille <tille at debian.org>,
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
- python3,
+ python3:any,
zlib1g-dev,
libhdf5-dev,
libboost-dev,
=====================================
debian/patches/compiler-flags.patch
=====================================
@@ -4,7 +4,7 @@ Forwarded: no
Last-Update: 2016-10-23
--- a/src/cpp/makefile
+++ b/src/cpp/makefile
-@@ -8,8 +8,8 @@ PBDAGCON_OBJECTS := BlasrM5AlnProvider.o
+@@ -8,8 +8,8 @@
DAZCON_OBJECTS := DB.o QV.o align.o DazAlnProvider.o dazcon.o
CPPFLAGS += -MMD -MP
@@ -15,3 +15,14 @@ Last-Update: 2016-10-23
INCDIRS := \
${DAZZ_DB_INCLUDE} \
+--- a/test/cpp/makefile
++++ b/test/cpp/makefile
+@@ -48,7 +48,7 @@
+ GTEST_CPPFLAGS += -isystem $(GTEST_INCLUDE) -isystem ${GTEST_SRC}/..
+ GTEST_CXXFLAGS += -g -Wall -Wextra -pthread
+
+-CXXFLAGS := -O3 -std=c++14
++CXXFLAGS += -O3 -std=c++14
+
+ GTEST_OBJECTS := gtest-all.o gtest_main.o
+ DAZCON_OBJECTS := DB.o QV.o align.o Alignment.o \
=====================================
debian/salsa-ci.yml
=====================================
@@ -2,3 +2,6 @@
include:
- https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
- https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
+
+variables:
+ SALSA_CI_DISABLE_BUILD_PACKAGE_I386: "true"
View it on GitLab: https://salsa.debian.org/med-team/pbdagcon/-/compare/a3ca86673dfb203bd496035257677c904bfb78dd...23b6a3ae8bab5da853b34d27e5750b5b2925277b
--
View it on GitLab: https://salsa.debian.org/med-team/pbdagcon/-/compare/a3ca86673dfb203bd496035257677c904bfb78dd...23b6a3ae8bab5da853b34d27e5750b5b2925277b
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