[med-svn] [Git][med-team/pairtools][master] 3 commits: Patch: Support Python 3.10. (Closes: #1000337)

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / pairtools


Commits:
f3bb4640 by Stefano Rivera at 2021-11-21T16:12:45-04:00
Patch: Support Python 3.10. (Closes: #1000337)

- - - - -
179ff05e by Stefano Rivera at 2021-11-21T16:13:11-04:00
Non-maintainer upload.

- - - - -
2c4a0d7e by Andreas Tille at 2021-11-21T21:20:19+00:00
Merge branch 'nmu' into 'master'

NMU: Python 3.10 support

See merge request med-team/pairtools!1
- - - - -


3 changed files:

- debian/changelog
- + debian/patches/python-3.10
- debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,10 @@
+pairtools (0.3.0-3.1) unstable; urgency=medium
+
+  * Non-maintainer upload.
+  * Patch: Support Python 3.10. (Closes: #1000337)
+
+ -- Stefano Rivera <stefanor at debian.org>  Sun, 21 Nov 2021 16:13:08 -0400
+
 pairtools (0.3.0-3) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/patches/python-3.10
=====================================
@@ -0,0 +1,26 @@
+From: Stefano Rivera <stefanor at debian.org>
+Date: Sun, 21 Nov 2021 16:00:00 -0400
+Subject: Import Mapping from collections.abc
+
+The collections alias was dropped in Python 3.10.
+
+Bug-Debian: https://bugs.debian.org/1000337
+Forwarded: https://github.com/open2c/pairtools/pull/108
+---
+ pairtools/pairtools_stats.py | 3 ++-
+ 1 file changed, 2 insertions(+), 1 deletion(-)
+
+diff --git a/pairtools/pairtools_stats.py b/pairtools/pairtools_stats.py
+index b1c05d4..842c77e 100644
+--- a/pairtools/pairtools_stats.py
++++ b/pairtools/pairtools_stats.py
+@@ -7,7 +7,8 @@ import click
+ 
+ import numpy as np
+ 
+-from collections import OrderedDict, Mapping
++from collections import OrderedDict
++from collections.abc import Mapping
+ 
+ from . import _fileio, _pairsam_format, cli, _headerops, common_io_options
+ 


=====================================
debian/patches/series
=====================================
@@ -1,3 +1,4 @@
 makefile
 fix-spelling
 tests-to-python3
+python-3.10



View it on GitLab: https://salsa.debian.org/med-team/pairtools/-/compare/abfab838382b00f9c6efecb7735e792c60ed4b1b...2c4a0d7e66b4c65c12adfa9290edd3cd76a6760c

-- 
View it on GitLab: https://salsa.debian.org/med-team/pairtools/-/compare/abfab838382b00f9c6efecb7735e792c60ed4b1b...2c4a0d7e66b4c65c12adfa9290edd3cd76a6760c
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