[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Mon Nov 29 13:42:29 GMT 2021



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
96e46c5f by Andreas Tille at 2021-11-29T13:42:23+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,68 +1,65 @@
-Last-Update: Mon, 29 Nov 2021 01:42:04 +0000
+Last-Update: Mon, 29 Nov 2021 13:42:04 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    179 | {imaging,covid-19}                                  | 
- orthanc                       |     98 | {covid-19,imaging,practice}                         | 
+ dcmtk                         |    180 | {imaging,covid-19}                                  | 
+ orthanc                       |     99 | {covid-19,imaging,practice}                         | 
  orthanc-wsi                   |     55 | {imaging,oncology,his,practice,laboratory,covid-19} | 
- htsjdk                        |     35 | {bio-dev}                                           | 
- amide                         |     33 | {imaging}                                           | 
- mrtrix3                       |     27 | {imaging}                                           | 
+ amide                         |     34 | {imaging}                                           | 
+ htsjdk                        |     34 | {bio-dev}                                           | 
  dcm2niix                      |     25 | {imaging}                                           | 
- dicomscope                    |     25 | {imaging}                                           | 
  gdcm                          |     25 | {imaging-dev}                                       | 
- openslide                     |     23 | {imaging}                                           | 
- dicom3tools                   |     22 | {imaging}                                           | 
- gnumed-server                 |     17 | {practice,covid-19}                                 | 
+ dicomscope                    |     24 | {imaging}                                           | 
+ openslide                     |     22 | {imaging}                                           | 
+ dicom3tools                   |     21 | {imaging}                                           | 
+ gnumed-server                 |     16 | {practice,covid-19}                                 | 
  odin                          |     16 | {imaging,imaging-dev}                               | 
  gdcm                          |     15 | {covid-19,imaging}                                  | 
  ngs-sdk                       |     15 | {bio-dev}                                           | 
  minc-tools                    |     14 | {imaging}                                           | 
+ mrtrix3                       |     14 | {imaging}                                           | 
  invesalius                    |     13 | {imaging}                                           | 
  orthanc-webviewer             |     13 | {imaging}                                           | 
  dicomnifti                    |     12 | {imaging}                                           | 
  insighttoolkit4               |     11 | {imaging-dev}                                       | 
- gdcm                          |     10 | {imaging-dev}                                       | 
  nifticlib                     |     10 | {imaging}                                           | 
- biojava-live                  |      9 | {bio-dev}                                           | 
+ gdcm                          |      9 | {imaging-dev}                                       | 
  king                          |      9 | {typesetting,imaging}                               | 
  pixelmed                      |      9 | {imaging}                                           | 
  adun.app                      |      8 | {bio}                                               | 
+ biojava-live                  |      8 | {bio-dev}                                           | 
+ libminc                       |      8 | {imaging-dev}                                       | 
  mia                           |      8 | {imaging}                                           | 
- libminc                       |      7 | {imaging-dev}                                       | 
+ nifticlib                     |      8 | {imaging-dev}                                       | 
  librg-utils-perl              |      7 | {bio}                                               | 
- nifticlib                     |      7 | {imaging-dev}                                       | 
  plastimatch                   |      7 | {imaging}                                           | 
  lagan                         |      6 | {bio}                                               | 
  ngs-sdk                       |      6 | {bio-dev}                                           | 
+ openslide                     |      6 | {imaging-dev}                                       | 
  orthanc-dicomweb              |      6 | {covid-19,imaging}                                  | 
- oscar                         |      6 | {data,tools,practice}                               | 
  jebl2                         |      5 | {bio-dev}                                           | 
  ngs-sdk                       |      5 | {bio-dev}                                           | 
  nifti2dicom                   |      5 | {imaging}                                           | 
- nipype                        |      5 | {imaging,imaging-dev}                               | 
- openslide                     |      5 | {imaging-dev}                                       | 
+ oscar                         |      5 | {data,tools,practice}                               | 
  rambo-k                       |      5 | {bio}                                               | 
- salmon                        |      5 | {covid-19,bio}                                      | 
  getdata                       |      4 | {bio}                                               | 
  libdivsufsort                 |      4 | {bio-dev}                                           | 
  libncl                        |      4 | {bio}                                               | 
  libsbml                       |      4 | {bio-dev}                                           | 
  melting                       |      4 | {bio,cloud}                                         | 
+ nipype                        |      4 | {imaging,imaging-dev}                               | 
  orthanc-mysql                 |      4 | {imaging}                                           | 
  orthanc-postgresql            |      4 | {imaging}                                           | 
  pymia                         |      4 | {imaging-dev}                                       | 
  runcircos-gui                 |      4 | {bio}                                               | 
+ salmon                        |      4 | {covid-19,bio}                                      | 
  treeview                      |      4 | {bio-phylogeny,bio}                                 | 
  bart-view                     |      3 | {imaging}                                           | 
- clonalorigin                  |      3 | {bio}                                               | 
  elastix                       |      3 | {imaging}                                           | 
  embassy-domalign              |      3 | {bio,cloud}                                         | 
- obitools                      |      3 | {bio}                                               | 
  papyrus                       |      3 | {imaging-dev}                                       | 
  phyutility                    |      3 | {cloud,bio}                                         | 
  saint                         |      3 | {bio}                                               | 
- srf                           |      3 | {bio-dev}                                           | 
  stacks                        |      3 | {bio}                                               | 
  tracetuner                    |      3 | {bio}                                               | 
  arden                         |      2 | {cloud,bio}                                         | 
@@ -70,15 +67,15 @@ Last-Update: Mon, 29 Nov 2021 01:42:04 +0000
  bio-tradis                    |      2 | {bio-dev,bio}                                       | 
  blimps                        |      2 | {bio}                                               | 
  canu                          |      2 | {bio}                                               | 
- dicompyler                    |      2 | {oncology}                                          | 
+ clonalorigin                  |      2 | {bio}                                               | 
  embassy-domainatrix           |      2 | {bio,cloud}                                         | 
  embassy-domsearch             |      2 | {bio,cloud}                                         | 
  ghmm                          |      2 | {bio}                                               | 
- gifticlib                     |      2 | {imaging-dev}                                       | 
  ipig                          |      2 | {bio}                                               | 
  jellyfish1                    |      2 | {bio}                                               | 
  lamarc                        |      2 | {bio}                                               | 
  libbio-mage-utils-perl        |      2 | {bio-dev}                                           | 
+ obitools                      |      2 | {bio}                                               | 
  opencfu                       |      2 | {laboratory}                                        | 
  orthanc-gdcm                  |      2 | {imaging}                                           | 
  piler                         |      2 | {bio}                                               | 
@@ -86,6 +83,7 @@ Last-Update: Mon, 29 Nov 2021 01:42:04 +0000
  rtax                          |      2 | {bio,cloud}                                         | 
  sibsim4                       |      2 | {bio,cloud}                                         | 
  sift                          |      2 | {bio}                                               | 
+ srf                           |      2 | {bio-dev}                                           | 
  staden                        |      2 | {bio}                                               | 
  acedb                         |      1 | {cloud,bio}                                         | 
  anfo                          |      1 | {bio,cloud}                                         | 
@@ -100,10 +98,12 @@ Last-Update: Mon, 29 Nov 2021 01:42:04 +0000
  clonalframeml                 |      1 | {bio,covid-19}                                      | 
  cmtk                          |      1 | {imaging}                                           | 
  delly                         |      1 | {covid-19,bio}                                      | 
+ dicompyler                    |      1 | {oncology}                                          | 
  fastml                        |      1 | {bio}                                               | 
  fsm-lite                      |      1 | {bio}                                               | 
- gatb-core                     |      1 | {bio}                                               | 
  gatb-core                     |      1 | {bio-dev}                                           | 
+ gatb-core                     |      1 | {bio}                                               | 
+ gifticlib                     |      1 | {imaging-dev}                                       | 
  hinge                         |      1 | {bio}                                               | 
  libbpp-core                   |      1 | {bio-dev}                                           | 
  libbpp-phyl                   |      1 | {bio-dev}                                           | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/96e46c5fe0c4c22ca51b357880da2942bba24ec9

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/96e46c5fe0c4c22ca51b357880da2942bba24ec9
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