[med-svn] [Git][med-team/berkeley-express][master] 8 commits: Fix watchfile to detect new versions on github

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / berkeley-express


Commits:
7b4a48b4 by Andreas Tille at 2021-10-13T14:29:24+02:00
Fix watchfile to detect new versions on github

- - - - -
7985716c by Andreas Tille at 2021-10-13T14:29:37+02:00
routine-update: Standards-Version: 4.6.0

- - - - -
47adae62 by Andreas Tille at 2021-10-13T14:29:37+02:00
routine-update: debhelper-compat 13

- - - - -
6f2764d2 by Andreas Tille at 2021-10-13T14:29:40+02:00
routine-update: Add salsa-ci file

- - - - -
1891b467 by Andreas Tille at 2021-10-13T14:29:40+02:00
routine-update: Rules-Requires-Root: no

- - - - -
5eb47b37 by Andreas Tille at 2021-10-13T14:29:40+02:00
routine-update: No tab in license text

- - - - -
9bfcd2f7 by Andreas Tille at 2021-10-13T14:29:49+02:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.

Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html

- - - - -
294e4b02 by Andreas Tille at 2021-10-13T14:31:23+02:00
routine-update: Ready to upload to unstable

- - - - -


6 changed files:

- debian/changelog
- debian/control
- debian/copyright
- + debian/salsa-ci.yml
- debian/upstream/metadata
- debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,17 @@
+berkeley-express (1.5.3+dfsg-2) unstable; urgency=medium
+
+  * Team upload.
+  * Fix watchfile to detect new versions on github
+  * Standards-Version: 4.6.0 (routine-update)
+  * debhelper-compat 13 (routine-update)
+  * Add salsa-ci file (routine-update)
+  * Rules-Requires-Root: no (routine-update)
+  * No tab in license text (routine-update)
+  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
+    Repository-Browse.
+
+ -- Andreas Tille <tille at debian.org>  Wed, 13 Oct 2021 14:29:57 +0200
+
 berkeley-express (1.5.3+dfsg-1) unstable; urgency=medium
 
   [ Jelmer Vernooij ]


=====================================
debian/control
=====================================
@@ -3,7 +3,7 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Michael R. Crusoe <crusoe at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper-compat (= 12),
+Build-Depends: debhelper-compat (= 13),
                libboost-thread-dev,
                libboost-system-dev,
                libboost-filesystem-dev,
@@ -15,16 +15,17 @@ Build-Depends: debhelper-compat (= 12),
                cmake,
                libprotobuf-dev,
                protobuf-compiler
-Standards-Version: 4.4.0
+Standards-Version: 4.6.0
 Vcs-Browser: https://salsa.debian.org/med-team/berkeley-express
 Vcs-Git: https://salsa.debian.org/med-team/berkeley-express.git
 Homepage: http://bio.math.berkeley.edu/eXpress/index.html
+Rules-Requires-Root: no
 
 Package: berkeley-express
 Architecture: any
 Depends: ${shlibs:Depends},
          ${misc:Depends}
-Recommends: med-config (>= 2.1)
+Recommends: med-config
 Description: Streaming quantification for high-throughput sequencing
  eXpress is a streaming tool for quantifying the abundances of a set of
  target sequences from sampled subsequences. Example applications include


=====================================
debian/copyright
=====================================
@@ -16,9 +16,9 @@ Copyright: (c) 2015 Michigan State University
 License: Artistic-2.0
 
 License: Artistic-2.0
-			 The "Artistic License"
+                         The "Artistic License"
  .
-				Preamble
+                                Preamble
  .
  1. You may make and give away verbatim copies of the source form of the
     Standard Version of this Package without restriction, provided that


=====================================
debian/salsa-ci.yml
=====================================
@@ -0,0 +1,4 @@
+---
+include:
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml


=====================================
debian/upstream/metadata
=====================================
@@ -1,3 +1,5 @@
+Bug-Database: https://github.com/adarob/eXpress/issues
+Bug-Submit: https://github.com/adarob/eXpress/issues/new
 Reference:
  - Author: Adam Roberts and Lior Pachter
    Title: >
@@ -42,3 +44,5 @@ Registry:
    Entry: SCR_006873
  - Name: conda:bioconda
    Entry: express
+Repository: https://github.com/adarob/eXpress.git
+Repository-Browse: https://github.com/adarob/eXpress


=====================================
debian/watch
=====================================
@@ -1,4 +1,4 @@
 version=4
 
 opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,repack,compression=xz" \
-  https://github.com/adarob/eXpress/releases .*/archive/@ANY_VERSION@@ARCHIVE_EXT@
+  https://github.com/adarob/eXpress/releases .*/@ANY_VERSION@@ARCHIVE_EXT@



View it on GitLab: https://salsa.debian.org/med-team/berkeley-express/-/compare/cbb1fe11e068aba793a71f4ed65d00bee697a382...294e4b02c0b842d600e6d0ab88c14c25d8557a00

-- 
View it on GitLab: https://salsa.debian.org/med-team/berkeley-express/-/compare/cbb1fe11e068aba793a71f4ed65d00bee697a382...294e4b02c0b842d600e6d0ab88c14c25d8557a00
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