[med-svn] [Git][med-team/snakemake][master] 6 commits: Preparing for +dfsg version
Steffen Möller (@moeller)
gitlab at salsa.debian.org
Tue Oct 19 15:23:54 BST 2021
Steffen Möller pushed to branch master at Debian Med / snakemake
Commits:
7c758012 by Steffen Moeller at 2021-10-19T15:53:28+02:00
Preparing for +dfsg version
- - - - -
079de32c by Steffen Moeller at 2021-10-19T15:58:48+02:00
Preparing for +dfsg1
- - - - -
13644d85 by Steffen Moeller at 2021-10-19T15:59:47+02:00
New upstream version 6.9.1+dfsg1
- - - - -
2e38a576 by Steffen Moeller at 2021-10-19T16:07:35+02:00
New upstream version 6.9.1+dfsg1
- - - - -
b87c0208 by Steffen Moeller at 2021-10-19T16:07:45+02:00
Update upstream source from tag 'upstream/6.9.1+dfsg1'
Update to upstream version '6.9.1+dfsg1'
with Debian dir a687e72736b4046ad76da4095463d2dc3692b9ee
- - - - -
c1dd4004 by Steffen Moeller at 2021-10-19T16:11:56+02:00
Remove autogenerated egg-info builds after clean
- - - - -
24 changed files:
- debian/TODO
- debian/changelog
- debian/copyright
- debian/rules
- debian/snakemake.lintian-overrides
- debian/watch
- − tests/test_metadata_migration/.snakemake/log/2020-11-03T113643.403148.snakemake.log
- − tests/test_metadata_migration/.snakemake/log/2020-11-03T113712.242836.snakemake.log
- − tests/test_metadata_migration/.snakemake/log/2020-11-03T113759.235916.snakemake.log
- − tests/test_module_report/.snakemake/metadata/ZmlnMS5zdmc=
- − tests/test_module_report/.snakemake/metadata/ZmlnMi5wbmc=
- − tests/test_module_report/.snakemake/metadata/dGVzdC40Lm91dA==
- − tests/test_module_report/.snakemake/metadata/dGVzdC41Lm91dA==
- − tests/test_module_report/.snakemake/metadata/dGVzdC42Lm91dA==
- − tests/test_module_report/.snakemake/metadata/dGVzdC43Lm91dA==
- − tests/test_module_report/.snakemake/metadata/dGVzdC44Lm91dA==
- − tests/test_module_report/.snakemake/metadata/dGVzdC45Lm91dA==
- − tests/test_module_report/.snakemake/metadata/dGVzdC4wLm91dA==
- − tests/test_module_report/.snakemake/metadata/dGVzdC4xLm91dA==
- − tests/test_module_report/.snakemake/metadata/dGVzdC4yLm91dA==
- − tests/test_module_report/.snakemake/metadata/dGVzdC4zLm91dA==
- − tests/test_module_report/.snakemake/metadata/dGVzdC5jc3Y=
- − tests/test_module_report/.snakemake/metadata/dGVzdGRpcg==
- − tests/test_restartable_job_qsub_exit_1/qsub.log
Changes:
=====================================
debian/TODO
=====================================
@@ -5,6 +5,6 @@ Tasks to do for next releases of snakemake
- no need to re-activated cognate test in d/rules since this requires internet
- add as recommendation to binary
- * Decide to remove obscure tests from source tree and have a +dfsg package
+ * Decide to remove obscure tests from source tree
P: snakemake source: embedded-script-includes-copyright-statement tests/test_module_report/expected-results/report.html extract of copyright statement: (c) js foundation and other contributors | jquery.org/l
P: snakemake source: embedded-script-includes-copyright-statement tests/test_report/expected-results/report.html extract of copyright statement: (c) js foundation and other contributors | jquery.org/l
=====================================
debian/changelog
=====================================
@@ -1,3 +1,9 @@
+snakemake (6.9.1+dfsg1-1) UNRELEASED; urgency=medium
+
+ * Team upload.
+
+ -- Steffen Moeller <moeller at debian.org> Tue, 19 Oct 2021 15:57:30 +0200
+
snakemake (6.9.1-1) UNRELEASED; urgency=medium
[ Andreas Tille ]
=====================================
debian/copyright
=====================================
@@ -2,6 +2,10 @@ Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: snakemake
Upstream-Contact: Johannes Köster <johannes.koester at tu-dortmund.de>
Source: https://github.com/snakemake/snakemake
+Files-Excluded:
+ tests/test_metadata_migration/.snakemake
+ tests/test_restartable_job_qsub_exit_1/qsub.log
+ tests/test_module_report/.snakemake/
Files: *
Copyright: 2015-2020 Johannes Köster <johannes.koester at tu-dortmund.de>, Manuel Holtgrewe, Christopher Tomkins-Tinch, Sven Nahnsen, Sebastian Kurscheid and contributors
@@ -90,4 +94,4 @@ License: BSD-3
License: Apache-2.0
- see /usr/share/common-licenses/Apache-2.0
\ No newline at end of file
+ see /usr/share/common-licenses/Apache-2.0
=====================================
debian/rules
=====================================
@@ -61,3 +61,5 @@ override_dh_auto_clean:
find tests -name "*.log" | grep -v expected-results | xargs -r rm -f
rm -rf .snakemake
rm -rf tests/test_metadata_migration/.snakemake
+ rm -rf snakemake.egg-info
+ if [ ! -r bin/snakemake ]; then rm -rf bin; fi
=====================================
debian/snakemake.lintian-overrides
=====================================
@@ -2,3 +2,9 @@ snakemake: no-manual-page usr/bin/snakemake-bash-completion
snakemake: script-not-executable usr/lib/python3/dist-packages/snakemake/executors/jobscript.sh
snakemake: extra-license-file usr/share/doc/snakemake/html/_sources/project_info/license.rst.txt
snakemake: repeated-path-segment snakemake usr/share/doc/snakemake/html/_modules/snakemake/*
+snakemake: repeated-path-segment 0 usr/share/doc/snakemake/tests/test_github_issue806/expected-results/data/en/0/0/
+snakemake: repeated-path-segment 0 usr/share/doc/snakemake/tests/test_github_issue806/expected-results/data/es/0/0/
+snakemake: repeated-path-segment 1 usr/share/doc/snakemake/tests/test_github_issue806/expected-results/data/en/1/1/
+snakemake: repeated-path-segment 1 usr/share/doc/snakemake/tests/test_github_issue806/expected-results/data/es/1/1/
+snakemake: repeated-path-segment 2 usr/share/doc/snakemake/tests/test_github_issue806/expected-results/data/en/2/2/
+snakemake: repeated-path-segment 2 usr/share/doc/snakemake/tests/test_github_issue806/expected-results/data/es/2/2/
=====================================
debian/watch
=====================================
@@ -1,4 +1,4 @@
version=4
-opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,filenamemangle=s/(?:.*?)?v?(\d[\d.]*)\.tar\.gz/snakemake-$1.tar.gz/" \
+opts="repacksuffix=+dfsg1,dversionmangle=auto,filenamemangle=s/(?:.*?)?v?(\d[\d.]*)\.tar\.gz/snakemake-$1.tar.gz/" \
https://github.com/snakemake/snakemake/releases/latest .*/v?@ANY_VERSION@@ARCHIVE_EXT@
=====================================
tests/test_metadata_migration/.snakemake/log/2020-11-03T113643.403148.snakemake.log deleted
=====================================
@@ -1,18 +0,0 @@
-Building DAG of jobs...
-Using shell: /usr/bin/bash
-Provided cores: 1 (use --cores to define parallelism)
-Rules claiming more threads will be scaled down.
-Job counts:
- count jobs
- 1 a
- 1
-
-[Tue Nov 3 11:36:43 2020]
-rule a:
- output: some/veryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryverylong/path.txt
- jobid: 0
-
-[Tue Nov 3 11:36:43 2020]
-Finished job 0.
-1 of 1 steps (100%) done
-Complete log: /home/johannes/scms/snakemake/tests/test_metadata_migration/.snakemake/log/2020-11-03T113643.403148.snakemake.log
=====================================
tests/test_metadata_migration/.snakemake/log/2020-11-03T113712.242836.snakemake.log deleted
=====================================
@@ -1,14 +0,0 @@
-Building DAG of jobs...
-Using shell: /usr/bin/bash
-Provided cores: 1 (use --cores to define parallelism)
-Rules claiming more threads will be scaled down.
-Job counts:
- count jobs
- 1 a
- 1
-
-[Tue Nov 3 11:37:12 2020]
-rule a:
- output: some/veryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryverylong/path.txt
- jobid: 0
-
=====================================
tests/test_metadata_migration/.snakemake/log/2020-11-03T113759.235916.snakemake.log deleted
=====================================
@@ -1,18 +0,0 @@
-Building DAG of jobs...
-Using shell: /usr/bin/bash
-Provided cores: 1 (use --cores to define parallelism)
-Rules claiming more threads will be scaled down.
-Job counts:
- count jobs
- 1 a
- 1
-
-[Tue Nov 3 11:37:59 2020]
-rule a:
- output: some/veryveryveryveryveryveryvery/veryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryvery/veryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryvery/veryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryvery/veryveryveryveryveryveryveryveryveryveryveryveryveryveryveryveryvery/veryveryveryveryveryveryveryveryveryveryveryveryverylong/path.txt
- jobid: 0
-
-[Tue Nov 3 11:37:59 2020]
-Finished job 0.
-1 of 1 steps (100%) done
-Complete log: /home/johannes/scms/snakemake/tests/test_metadata_migration/.snakemake/log/2020-11-03T113759.235916.snakemake.log
=====================================
tests/test_module_report/.snakemake/metadata/ZmlnMS5zdmc= deleted
=====================================
@@ -1 +0,0 @@
-{"version": null, "code": "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", "rule": "a", "input": ["test.0.out", "test.1.out", "test.2.out", "test.3.out", "test.4.out", "test.5.out", "test.6.out", "test.7.out", "test.8.out", "test.9.out"], "log": [], "params": [], "shellcmd": "sleep `shuf -i 1-3 -n 1`; cp data/fig1.svg fig1.svg", "incomplete": false, "starttime": 1585317522.4600606, "endtime": 1585317524.4880722, "job_hash": 2107624497111535029, "conda_env": null, "container_img_url": null}
\ No newline at end of file
=====================================
tests/test_module_report/.snakemake/metadata/ZmlnMi5wbmc= deleted
=====================================
@@ -1 +0,0 @@
-{"version": null, "code": "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", "rule": "b", "input": ["test.0.out", "test.1.out", "test.2.out", "test.3.out", "test.4.out", "test.5.out", "test.6.out", "test.7.out", "test.8.out", "test.9.out"], "log": [], "params": [], "shellcmd": "sleep `shuf -i 1-3 -n 1`; cp data/fig2.png fig2.png", "incomplete": false, "starttime": 1585317522.4760606, "endtime": 1585317523.5040665, "job_hash": 7638699196749507097, "conda_env": null, "container_img_url": null}
\ No newline at end of file
=====================================
tests/test_module_report/.snakemake/metadata/dGVzdC40Lm91dA== deleted
=====================================
@@ -1 +0,0 @@
-{"version": null, "code": "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", "rule": "c", "input": [], "log": [], "params": [], "shellcmd": "sleep `shuf -i 1-3 -n 1`; touch test.4.out", "incomplete": false, "starttime": 1585317519.3560429, "endtime": 1585317520.3800488, "job_hash": 3471465265311225051, "conda_env": null, "container_img_url": "docker://continuumio/miniconda3:4.4.10"}
\ No newline at end of file
=====================================
tests/test_module_report/.snakemake/metadata/dGVzdC41Lm91dA== deleted
=====================================
@@ -1 +0,0 @@
-{"version": null, "code": "gAMoQxJ0AGQBfA58EWQCjQMBAGQAUwBxAChYBQAAAGlucHV0cQFYBgAAAG91dHB1dHECWAYAAABwYXJhbXNxA1gJAAAAd2lsZGNhcmRzcQRYBwAAAHRocmVhZHNxBVgJAAAAcmVzb3VyY2VzcQZYAwAAAGxvZ3EHWAcAAAB2ZXJzaW9ucQhYBAAAAHJ1bGVxCVgJAAAAY29uZGFfZW52cQpYDQAAAGNvbnRhaW5lcl9pbWdxC1gQAAAAc2luZ3VsYXJpdHlfYXJnc3EMWA8AAAB1c2Vfc2luZ3VsYXJpdHlxDVgLAAAAZW52X21vZHVsZXNxDlgMAAAAYmVuY2hfcmVjb3JkcQ9YBQAAAGpvYmlkcRBYCAAAAGlzX3NoZWxscRFYDwAAAGJlbmNoX2l0ZXJhdGlvbnESWA8AAABjbGVhbnVwX3NjcmlwdHNxE1gKAAAAc2hhZG93X2RpcnEUdHEVXXEWKE5YKAAAAHNsZWVwIGBzaHVmIC1pIDEtMyAtbiAxYDsgdG91Y2gge291dHB1dH1xF2gPaBKGcRhlWAUAAABzaGVsbHEZhXEadHEbLg==", "rule": "c", "input": [], "log": [], "params": [], "shellcmd": "sleep `shuf -i 1-3 -n 1`; touch test.5.out", "incomplete": false, "starttime": 1585317518.3440373, "endtime": 1585317521.3600543, "job_hash": -4453652366712017362, "conda_env": null, "container_img_url": "docker://continuumio/miniconda3:4.4.10"}
\ No newline at end of file
=====================================
tests/test_module_report/.snakemake/metadata/dGVzdC42Lm91dA== deleted
=====================================
@@ -1 +0,0 @@
-{"version": null, "code": "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", "rule": "c", "input": [], "log": [], "params": [], "shellcmd": "sleep `shuf -i 1-3 -n 1`; touch test.6.out", "incomplete": false, "starttime": 1585317518.3320372, "endtime": 1585317519.348043, "job_hash": -5792833771891348507, "conda_env": null, "container_img_url": "docker://continuumio/miniconda3:4.4.10"}
\ No newline at end of file
=====================================
tests/test_module_report/.snakemake/metadata/dGVzdC43Lm91dA== deleted
=====================================
@@ -1 +0,0 @@
-{"version": null, "code": "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", "rule": "c", "input": [], "log": [], "params": [], "shellcmd": "sleep `shuf -i 1-3 -n 1`; touch test.7.out", "incomplete": false, "starttime": 1585317518.340037, "endtime": 1585317520.3520486, "job_hash": 169637128606654253, "conda_env": null, "container_img_url": "docker://continuumio/miniconda3:4.4.10"}
\ No newline at end of file
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tests/test_module_report/.snakemake/metadata/dGVzdC44Lm91dA== deleted
=====================================
@@ -1 +0,0 @@
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\ No newline at end of file
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tests/test_module_report/.snakemake/metadata/dGVzdC45Lm91dA== deleted
=====================================
@@ -1 +0,0 @@
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\ No newline at end of file
=====================================
tests/test_module_report/.snakemake/metadata/dGVzdC4wLm91dA== deleted
=====================================
@@ -1 +0,0 @@
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\ No newline at end of file
=====================================
tests/test_module_report/.snakemake/metadata/dGVzdC4xLm91dA== deleted
=====================================
@@ -1 +0,0 @@
-{"version": null, "code": "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", "rule": "c", "input": [], "log": [], "params": [], "shellcmd": "sleep `shuf -i 1-3 -n 1`; touch test.1.out", "incomplete": false, "starttime": 1585317518.3680375, "endtime": 1585317521.3880546, "job_hash": 4581141678275462678, "conda_env": null, "container_img_url": "docker://continuumio/miniconda3:4.4.10"}
\ No newline at end of file
=====================================
tests/test_module_report/.snakemake/metadata/dGVzdC4yLm91dA== deleted
=====================================
@@ -1 +0,0 @@
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\ No newline at end of file
=====================================
tests/test_module_report/.snakemake/metadata/dGVzdC4zLm91dA== deleted
=====================================
@@ -1 +0,0 @@
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\ No newline at end of file
=====================================
tests/test_module_report/.snakemake/metadata/dGVzdC5jc3Y= deleted
=====================================
@@ -1 +0,0 @@
-{"version": null, "code": "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", "rule": "d", "input": [], "log": [], "params": [], "shellcmd": "curl http://samplecsvs.s3.amazonaws.com/Sacramentorealestatetransactions.csv > test.csv", "incomplete": false, "starttime": 1585317518.3600373, "endtime": 1585317519.4120433, "job_hash": 5729990202001040214, "conda_env": null, "container_img_url": null}
\ No newline at end of file
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tests/test_module_report/.snakemake/metadata/dGVzdGRpcg== deleted
=====================================
@@ -1 +0,0 @@
-{"version": null, "code": "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", "rule": "e", "input": [], "log": [], "params": [], "shellcmd": "\n mkdir testdir\n for x in 1 2 3\n do \n echo $x > testdir/$x.txt\n done\n ", "incomplete": false, "starttime": 1585317518.3560374, "endtime": 1585317518.3680375, "job_hash": 2045751853232800755, "conda_env": null, "container_img_url": null}
\ No newline at end of file
=====================================
tests/test_restartable_job_qsub_exit_1/qsub.log deleted
=====================================
@@ -1 +0,0 @@
-Mo 12. Dez 14:36:23 CET 2016
View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/e5d06b9b525a49573053a94ebcc6e465ef2fbb10...c1dd4004119e230a407b945cd7fa291df75ef951
--
View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/e5d06b9b525a49573053a94ebcc6e465ef2fbb10...c1dd4004119e230a407b945cd7fa291df75ef951
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