Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
f9d9f5e8 by Andreas Tille at 2022-04-11T13:42:21+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,13 +1,13 @@
-Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
+Last-Update: Mon, 11 Apr 2022 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 184 | {imaging,covid-19} |
+ dcmtk | 182 | {imaging,covid-19} |
orthanc | 95 | {imaging,covid-19,practice} |
orthanc-wsi | 45 | {laboratory,practice,imaging,covid-19,oncology,his} |
- dicomscope | 28 | {imaging} |
- amide | 27 | {imaging} |
- dcm2niix | 25 | {imaging} |
+ dicomscope | 27 | {imaging} |
+ amide | 26 | {imaging} |
+ dcm2niix | 24 | {imaging} |
dicom3tools | 24 | {imaging} |
orthanc-webviewer | 15 | {imaging} |
mrtrix3 | 14 | {imaging} |
@@ -20,32 +20,33 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
libminc | 8 | {imaging-dev} |
pixelmed | 8 | {imaging} |
gdcm | 7 | {imaging,covid-19} |
- gdcm | 7 | {imaging-dev} |
invesalius | 7 | {imaging} |
librg-utils-perl | 7 | {bio} |
minc-tools | 7 | {imaging} |
nifti2dicom | 7 | {imaging} |
obitools | 7 | {bio} |
+ orthanc-dicomweb | 7 | {covid-19,imaging} |
oscar | 7 | {data,practice,tools} |
treeview | 7 | {bio,bio-phylogeny} |
dicompyler | 6 | {oncology} |
ghmm | 6 | {bio} |
- nifticlib | 6 | {imaging} |
nifticlib | 6 | {imaging-dev} |
- nipype | 6 | {imaging,imaging-dev} |
- orthanc-dicomweb | 6 | {covid-19,imaging} |
+ nifticlib | 6 | {imaging} |
orthanc-postgresql | 6 | {imaging} |
- salmon | 6 | {bio,covid-19} |
adun.app | 5 | {bio} |
bio-tradis | 5 | {bio-dev,bio} |
blimps | 5 | {bio} |
embassy-domsearch | 5 | {cloud,bio} |
+ gdcm | 5 | {imaging-dev} |
getdata | 5 | {bio} |
jebl2 | 5 | {bio-dev} |
lamarc | 5 | {bio} |
libncl | 5 | {bio} |
+ nipype | 5 | {imaging,imaging-dev} |
+ orthanc-gdcm | 5 | {imaging} |
orthanc-mysql | 5 | {imaging} |
plastimatch | 5 | {imaging} |
+ salmon | 5 | {bio,covid-19} |
sift | 5 | {bio} |
bitseq | 4 | {bio} |
canu | 4 | {bio} |
@@ -54,10 +55,8 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
mauve-aligner | 4 | {bio} |
melting | 4 | {bio,cloud} |
mia | 4 | {imaging} |
- orthanc-gdcm | 4 | {imaging} |
phyutility | 4 | {cloud,bio} |
piler | 4 | {bio} |
- python-wdlparse | 4 | {bio-dev} |
rambo-k | 4 | {bio} |
rtax | 4 | {cloud,bio} |
runcircos-gui | 4 | {bio} |
@@ -75,7 +74,9 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
gatb-core | 3 | {bio} |
hinge | 3 | {bio} |
ipig | 3 | {bio} |
+ king | 3 | {imaging,typesetting} |
librdp-taxonomy-tree-java | 3 | {bio-dev} |
+ libsbml | 3 | {bio-dev} |
metaphlan2 | 3 | {bio} |
mhap | 3 | {bio-ngs,bio} |
opencfu | 3 | {laboratory} |
@@ -92,17 +93,15 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
cat-bat | 2 | {covid-19,bio} |
elastix | 2 | {imaging} |
jmodeltest | 2 | {bio,bio-phylogeny} |
- king | 2 | {imaging,typesetting} |
libbio-mage-utils-perl | 2 | {bio-dev} |
libdivsufsort | 2 | {bio-dev} |
libgenome | 2 | {bio-dev} |
libpal-java | 2 | {bio-dev} |
- libsbml | 2 | {bio-dev} |
microbegps | 2 | {bio} |
orthanc-python | 2 | {covid-19} |
- pigx-rnaseq | 2 | {covid-19,bio} |
pscan-chip | 2 | {bio} |
pymia | 2 | {imaging-dev} |
+ python-wdlparse | 2 | {bio-dev} |
qcumber | 2 | {bio} |
sga | 2 | {bio} |
soapaligner | 2 | {bio} |
@@ -127,6 +126,7 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
mssstest | 1 | {tools} |
opensurgsim | 1 | {imaging-dev} |
papyrus | 1 | {imaging-dev} |
+ pigx-rnaseq | 1 | {covid-19,bio} |
pique | 1 | {bio} |
pplacer | 1 | {covid-19,bio-phylogeny,bio} |
seq-gen | 1 | {bio} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,65 +1,64 @@
-Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
+Last-Update: Mon, 11 Apr 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 3075 | {viewing} |
- sympy | 2013 | {physics,nanoscale-physics} |
- suitesparse | 256 | {mathematics-dev,numericalcomputation} |
- armadillo | 212 | {mathematics-dev} |
- spyder | 207 | {numericalcomputation} |
- python-pyqtgraph | 159 | {viewing} |
- atlas | 96 | {mathematics-dev} |
- arpack | 59 | {mathematics-dev} |
- arduino-mk | 55 | {robotics} |
- cypari2 | 53 | {mathematics-dev} |
- imview | 49 | {viewing} |
- nltk | 48 | {linguistics} |
- pyzo | 48 | {numericalcomputation} |
- rubiks | 42 | {geometry,mathematics} |
+ gts | 3067 | {viewing} |
+ sympy | 2011 | {physics,nanoscale-physics} |
+ suitesparse | 257 | {mathematics-dev,numericalcomputation} |
+ armadillo | 218 | {mathematics-dev} |
+ python-pyqtgraph | 152 | {viewing} |
+ atlas | 93 | {mathematics-dev} |
+ arpack | 62 | {mathematics-dev} |
+ arduino-mk | 54 | {robotics} |
+ cypari2 | 50 | {mathematics-dev} |
+ imview | 50 | {viewing} |
+ nltk | 50 | {linguistics} |
+ pyzo | 47 | {numericalcomputation} |
+ rubiks | 41 | {geometry,mathematics} |
eclib | 40 | {mathematics} |
- flintqs | 39 | {mathematics} |
+ flintqs | 38 | {mathematics} |
fftw | 32 | {mathematics-dev,meteorology-dev,physics-dev} |
- sketch | 27 | {typesetting} |
+ sketch | 28 | {typesetting} |
+ cernlib | 23 | {highenergy-physics} |
guidata | 22 | {dataacquisition-dev} |
guiqwt | 22 | {numericalcomputation,viewing} |
- cernlib | 21 | {highenergy-physics} |
- geg | 21 | {viewing} |
+ feedgnuplot | 21 | {viewing} |
gts | 21 | {viewing-dev} |
vitables | 21 | {numericalcomputation} |
bossa | 20 | {devices} |
- feedgnuplot | 20 | {viewing} |
+ geg | 20 | {viewing} |
+ neuron | 19 | {neuroscience-modeling,highenergy-physics,simulations} |
coinor-symphony | 18 | {mathematics,logic,numericalcomputation} |
gfsview | 18 | {viewing} |
- neuron | 18 | {neuroscience-modeling,highenergy-physics,simulations} |
fftw | 17 | {mathematics-dev,meteorology-dev,physics-dev} |
- mathgl | 16 | {viewing} |
- scalapack | 16 | {nanoscale-physics-dev} |
- cernlib | 15 | {highenergy-physics-dev} |
- matlab-support | 15 | {mathematics,numericalcomputation} |
+ mathgl | 17 | {viewing} |
+ cernlib | 16 | {highenergy-physics-dev} |
+ opencascade | 16 | {simulations} |
+ rheolef | 15 | {mathematics} |
+ scalapack | 15 | {nanoscale-physics-dev} |
auto-07p | 14 | {mathematics} |
form | 14 | {mathematics} |
+ matlab-support | 14 | {mathematics,numericalcomputation} |
ntl | 14 | {mathematics-dev} |
- opencascade | 14 | {simulations} |
opticalraytracer | 14 | {physics} |
- rheolef | 14 | {mathematics} |
+ ppl | 14 | {numericalcomputation} |
libmatio | 13 | {mathematics-dev} |
picosat | 13 | {logic} |
- ppl | 13 | {numericalcomputation} |
- ros-rosconsole | 12 | {robotics-dev} |
- ros-ros-environment | 12 | {robotics-dev} |
+ debian-science | 12 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
+ neuron | 12 | {highenergy-physics-dev} |
tango | 12 | {dataacquisition} |
apophenia | 11 | {statistics} |
- debian-science | 11 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
getdp | 11 | {engineering,simulations,mathematics} |
- neuron | 11 | {highenergy-physics-dev} |
polylib | 11 | {mathematics} |
+ ros-rosconsole | 11 | {robotics-dev} |
+ ros-ros-environment | 11 | {robotics-dev} |
toulbar2 | 11 | {mathematics,numericalcomputation,logic,physics} |
+ debian-science | 10 | {nanoscale-physics,economics,physics,machine-learning} |
+ debian-science | 10 | {physics,nanoscale-physics,economics,statistics} |
flann | 10 | {mathematics-dev,engineering-dev} |
libitpp | 10 | {mathematics-dev,engineering-dev} |
+ psurface | 10 | {numericalcomputation} |
uctodata | 10 | {linguistics} |
- debian-science | 9 | {nanoscale-physics,economics,physics,machine-learning} |
- debian-science | 9 | {physics,nanoscale-physics,economics,statistics} |
- psurface | 9 | {numericalcomputation} |
syrthes | 9 | {engineering} |
ucto | 9 | {linguistics} |
astk | 8 | {engineering} |
@@ -75,34 +74,33 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
jeuclid | 7 | {viewing,typesetting} |
lxi-tools | 7 | {engineering,dataacquisition} |
scram | 7 | {engineering} |
- urdfdom-headers | 7 | {robotics-dev} |
cernlib | 6 | {highenergy-physics} |
+ cimg | 6 | {imageanalysis-dev} | {x11::library}
cliquer | 6 | {mathematics} |
coinmp | 6 | {numericalcomputation,logic,mathematics-dev} |
dune-uggrid | 6 | {mathematics-dev} |
dxsamples | 6 | {nanoscale-physics} |
- ipe-tools | 6 | {typesetting} |
libmatheval | 6 | {mathematics} |
opencascade | 6 | {simulations} |
+ python-escript | 6 | {numericalcomputation,engineering,simulations} |
simbody | 6 | {robotics-dev} |
teem | 6 | {imageanalysis} |
alberta | 5 | {engineering-dev} |
cernlib | 5 | {highenergy-physics} |
- cimg | 5 | {imageanalysis-dev} | {x11::library}
coda | 5 | {meteorology-dev} |
debian-science | 5 | {electrophysiology} |
dune-istl | 5 | {mathematics-dev} |
+ ipe-tools | 5 | {typesetting} |
libvigraimpex | 5 | {imageanalysis-dev,machine-learning} |
morse-simulator | 5 | {robotics} |
muparser | 5 | {mathematics-dev} |
openmx | 5 | {physics,nanoscale-physics} |
pcl | 5 | {robotics-dev} |
- python-escript | 5 | {numericalcomputation,engineering,simulations} |
- taurus | 5 | {dataacquisition} |
+ urdfdom-headers | 5 | {robotics-dev} |
cbflib | 4 | {nanoscale-physics} |
coda | 4 | {meteorology} |
- debian-science | 4 | {psychophysics} |
debian-science | 4 | {tools} |
+ debian-science | 4 | {psychophysics} |
dimbl | 4 | {linguistics} |
dxflib | 4 | {engineering-dev} |
eclib | 4 | {mathematics-dev} |
@@ -113,18 +111,16 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
looptools | 4 | {highenergy-physics} |
mbt | 4 | {linguistics} |
sac2mseed | 4 | {geography} |
+ taurus | 4 | {dataacquisition} |
apertium-streamparser | 3 | {linguistics} |
- debian-science | 3 | {electrophysiology} |
- debian-science | 3 | {economics} |
debian-science | 3 | {physics} |
- fastjet | 3 | {highenergy-physics-dev} |
+ debian-science | 3 | {economics} |
+ debian-science | 3 | {electrophysiology} |
hpcc | 3 | {numericalcomputation,distributedcomputing} |
jhdf | 3 | {engineering} |
jhdf | 3 | {engineering-dev} |
libcgns | 3 | {engineering-dev} |
libgetdata | 3 | {dataacquisition-dev} |
- liblbfgs | 3 | {mathematics-dev} |
- libvigraimpex | 3 | {imageanalysis-dev,machine-learning} |
looptools | 3 | {highenergy-physics-dev} |
mbtserver | 3 | {linguistics} |
mrmpi | 3 | {tools} |
@@ -140,11 +136,13 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
x13as | 3 | {economics} |
apophenia | 2 | {statistics} |
cernlib | 2 | {highenergy-physics} |
+ clhep | 2 | {highenergy-physics-dev} |
clipper | 2 | {nanoscale-physics-dev} |
code-saturne | 2 | {engineering-dev,mathematics-dev} |
- debian-science | 2 | {nanoscale-physics-dev} |
debian-science | 2 | {neuroscience-cognitive} |
+ debian-science | 2 | {nanoscale-physics-dev} |
dune-localfunctions | 2 | {mathematics-dev} |
+ fastjet | 2 | {highenergy-physics-dev} |
gf2x | 2 | {mathematics-dev} |
harp | 2 | {meteorology} |
iml | 2 | {mathematics-dev} |
@@ -152,7 +150,9 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
libccp4 | 2 | {nanoscale-physics-dev} |
libgetdata | 2 | {dataacquisition-dev} |
libgtkdatabox | 2 | {engineering-dev,viewing-dev} |
+ liblbfgs | 2 | {mathematics-dev} |
libm4rie | 2 | {mathematics-dev} |
+ libvigraimpex | 2 | {imageanalysis-dev,machine-learning} |
libzn-poly | 2 | {mathematics-dev} |
lrcalc | 2 | {mathematics-dev} |
newmat | 2 | {mathematics-dev} |
@@ -166,7 +166,6 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
asl | 1 | {physics-dev} |
cbflib | 1 | {nanoscale-physics-dev} |
cld2 | 1 | {linguistics} |
- clhep | 1 | {highenergy-physics-dev} |
cliquer | 1 | {mathematics-dev} |
coda | 1 | {meteorology-dev} |
collada-dom | 1 | {viewing-dev} |
@@ -228,8 +227,8 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
apertium-urd-hin | 0 | {linguistics} |
calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
calculix-ccx-test | 0 | {simulations,engineering,numericalcomputation} |
- cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {highenergy-physics-dev} |
+ cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {highenergy-physics,physics} |
ckon | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
@@ -269,5 +268,5 @@ Last-Update: Mon, 11 Apr 2022 01:42:04 +0000
triangle | 0 | {physics-dev} |
trilinos | 0 | {physics-dev,mathematics-dev,engineering-dev} |
visp-images | 0 | {robotics-dev} |
-(301 rows)
+(300 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f9d9f5e834c6ce492a0e3481d8e863596e2e5bae
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f9d9f5e834c6ce492a0e3481d8e863596e2e5bae
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