Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
5927f0d6 by Andreas Tille at 2022-04-15T13:42:30+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,68 +1,71 @@
-Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
+Last-Update: Fri, 15 Apr 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 186 | {imaging,covid-19} |
- orthanc | 98 | {imaging,covid-19,practice} |
+ dcmtk | 188 | {imaging,covid-19} |
+ orthanc | 99 | {imaging,covid-19,practice} |
orthanc-wsi | 47 | {laboratory,practice,imaging,covid-19,oncology,his} |
- amide | 25 | {imaging} |
- dicomscope | 25 | {imaging} |
- dicom3tools | 24 | {imaging} |
- dcm2niix | 22 | {imaging} |
- orthanc-webviewer | 14 | {imaging} |
+ amide | 26 | {imaging} |
+ dicomscope | 26 | {imaging} |
+ dicom3tools | 23 | {imaging} |
+ dcm2niix | 21 | {imaging} |
+ orthanc-webviewer | 15 | {imaging} |
mrtrix3 | 13 | {imaging} |
+ dicomnifti | 11 | {imaging} |
gnumed-server | 11 | {practice,covid-19} |
- dicomnifti | 10 | {imaging} |
openslide | 10 | {imaging-dev} |
biojava-live | 9 | {bio-dev} |
nifti2dicom | 9 | {imaging} |
invesalius | 8 | {imaging} |
libminc | 8 | {imaging-dev} |
+ minc-tools | 8 | {imaging} |
orthanc-dicomweb | 8 | {covid-19,imaging} |
+ orthanc-postgresql | 8 | {imaging} |
pixelmed | 8 | {imaging} |
gdcm | 7 | {imaging-dev} |
+ gdcm | 7 | {imaging,covid-19} |
librg-utils-perl | 7 | {bio} |
- minc-tools | 7 | {imaging} |
nifti2dicom | 7 | {imaging} |
obitools | 7 | {bio} |
openslide | 7 | {imaging} |
- orthanc-postgresql | 7 | {imaging} |
treeview | 7 | {bio,bio-phylogeny} |
dicompyler | 6 | {oncology} |
- gdcm | 6 | {imaging,covid-19} |
- ghmm | 6 | {bio} |
nifticlib | 6 | {imaging-dev} |
+ nifticlib | 6 | {imaging} |
+ nipype | 6 | {imaging,imaging-dev} |
orthanc-mysql | 6 | {imaging} |
oscar | 6 | {data,practice,tools} |
+ plastimatch | 6 | {imaging} |
adun.app | 5 | {bio} |
bio-tradis | 5 | {bio-dev,bio} |
- blimps | 5 | {bio} |
+ canu | 5 | {bio} |
+ cmtk | 5 | {imaging} |
embassy-domsearch | 5 | {cloud,bio} |
getdata | 5 | {bio} |
- jebl2 | 5 | {bio-dev} |
+ ghmm | 5 | {bio} |
lamarc | 5 | {bio} |
libncl | 5 | {bio} |
- nifticlib | 5 | {imaging} |
- nipype | 5 | {imaging,imaging-dev} |
+ mia | 5 | {imaging} |
orthanc-gdcm | 5 | {imaging} |
- plastimatch | 5 | {imaging} |
+ runcircos-gui | 5 | {bio} |
salmon | 5 | {bio,covid-19} |
- sift | 5 | {bio} |
stacks | 5 | {bio} |
- staden | 5 | {bio} |
bitseq | 4 | {bio} |
- canu | 4 | {bio} |
- cmtk | 4 | {imaging} |
+ blimps | 4 | {bio} |
embassy-domainatrix | 4 | {bio,cloud} |
+ ipig | 4 | {bio} |
+ jebl2 | 4 | {bio-dev} |
mauve-aligner | 4 | {bio} |
melting | 4 | {bio,cloud} |
- mia | 4 | {imaging} |
+ mhap | 4 | {bio-ngs,bio} |
+ opencfu | 4 | {laboratory} |
phyutility | 4 | {cloud,bio} |
piler | 4 | {bio} |
rambo-k | 4 | {bio} |
rtax | 4 | {cloud,bio} |
- runcircos-gui | 4 | {bio} |
saint | 4 | {bio} |
+ sift | 4 | {bio} |
+ staden | 4 | {bio} |
beast-mcmc | 3 | {bio,bio-phylogeny} |
biomaj3-cli | 3 | {cloud} |
brig | 3 | {bio} |
@@ -73,12 +76,10 @@ Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
fastml | 3 | {bio} |
gatb-core | 3 | {bio} |
hinge | 3 | {bio} |
- ipig | 3 | {bio} |
+ king | 3 | {imaging,typesetting} |
librdp-taxonomy-tree-java | 3 | {bio-dev} |
libsbml | 3 | {bio-dev} |
metaphlan2 | 3 | {bio} |
- mhap | 3 | {bio-ngs,bio} |
- opencfu | 3 | {laboratory} |
placnet | 3 | {bio} |
plasmidseeker | 3 | {bio} |
proalign | 3 | {bio,bio-phylogeny} |
@@ -90,9 +91,9 @@ Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
assemblytics | 2 | {bio} |
bart-view | 2 | {imaging} |
cat-bat | 2 | {covid-19,bio} |
+ cufflinks | 2 | {bio,cloud} |
elastix | 2 | {imaging} |
jmodeltest | 2 | {bio,bio-phylogeny} |
- king | 2 | {imaging,typesetting} |
libbio-mage-utils-perl | 2 | {bio-dev} |
libdivsufsort | 2 | {bio-dev} |
libgenome | 2 | {bio-dev} |
@@ -114,7 +115,6 @@ Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
tracetuner | 2 | {bio} |
tvc | 2 | {bio} |
zalign | 2 | {cloud,bio} |
- cufflinks | 1 | {bio,cloud} |
dextractor | 1 | {covid-19,bio} |
emboss-explorer | 1 | {bio} |
emmax | 1 | {bio} |
@@ -182,8 +182,8 @@ Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
plasmidid | 0 | {covid-19,bio} |
- python-seqcluster | 0 | {bio} |
python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
sight | 0 | {imaging-dev} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,64 +1,63 @@
-Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
+Last-Update: Fri, 15 Apr 2022 13:42:05 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 3088 | {viewing} |
- sympy | 2055 | {physics,nanoscale-physics} |
- suitesparse | 258 | {mathematics-dev,numericalcomputation} |
+ gts | 3072 | {viewing} |
+ sympy | 2052 | {physics,nanoscale-physics} |
+ suitesparse | 256 | {mathematics-dev,numericalcomputation} |
armadillo | 220 | {mathematics-dev} |
python-pyqtgraph | 146 | {viewing} |
- atlas | 99 | {mathematics-dev} |
- arpack | 63 | {mathematics-dev} |
- nltk | 58 | {linguistics} |
- arduino-mk | 56 | {robotics} |
- cypari2 | 51 | {mathematics-dev} |
- imview | 50 | {viewing} |
- pyzo | 46 | {numericalcomputation} |
- rubiks | 40 | {geometry,mathematics} |
+ atlas | 96 | {mathematics-dev} |
+ arpack | 61 | {mathematics-dev} |
+ nltk | 60 | {linguistics} |
+ arduino-mk | 53 | {robotics} |
+ cypari2 | 52 | {mathematics-dev} |
+ imview | 51 | {viewing} |
+ pyzo | 45 | {numericalcomputation} |
+ rubiks | 42 | {geometry,mathematics} |
eclib | 38 | {mathematics} |
- flintqs | 36 | {mathematics} |
+ flintqs | 37 | {mathematics} |
fftw | 33 | {mathematics-dev,meteorology-dev,physics-dev} |
sketch | 26 | {typesetting} |
- cernlib | 22 | {highenergy-physics} |
- geg | 21 | {viewing} |
- bossa | 20 | {devices} |
+ geg | 22 | {viewing} |
+ cernlib | 21 | {highenergy-physics} |
feedgnuplot | 20 | {viewing} |
gts | 20 | {viewing-dev} |
vitables | 20 | {numericalcomputation} |
guidata | 19 | {dataacquisition-dev} |
guiqwt | 19 | {numericalcomputation,viewing} |
neuron | 19 | {neuroscience-modeling,highenergy-physics,simulations} |
- gfsview | 18 | {viewing} |
- coinor-symphony | 17 | {mathematics,logic,numericalcomputation} |
+ bossa | 18 | {devices} |
+ gfsview | 17 | {viewing} |
mathgl | 17 | {viewing} |
opencascade | 17 | {simulations} |
- cernlib | 16 | {highenergy-physics-dev} |
+ coinor-symphony | 16 | {mathematics,logic,numericalcomputation} |
fftw | 16 | {mathematics-dev,meteorology-dev,physics-dev} |
- scalapack | 15 | {nanoscale-physics-dev} |
+ cernlib | 15 | {highenergy-physics-dev} |
+ libmatio | 15 | {mathematics-dev} |
+ ros-ros-environment | 15 | {robotics-dev} |
auto-07p | 14 | {mathematics} |
form | 14 | {mathematics} |
- libmatio | 14 | {mathematics-dev} |
matlab-support | 14 | {mathematics,numericalcomputation} |
ntl | 14 | {mathematics-dev} |
picosat | 14 | {logic} |
- rheolef | 14 | {mathematics} |
- ros-ros-environment | 14 | {robotics-dev} |
- opticalraytracer | 13 | {physics} |
ppl | 13 | {numericalcomputation} |
+ rheolef | 13 | {mathematics} |
+ scalapack | 13 | {nanoscale-physics-dev} |
debian-science | 12 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
+ flann | 12 | {mathematics-dev,engineering-dev} |
neuron | 12 | {highenergy-physics-dev} |
+ opticalraytracer | 12 | {physics} |
ros-rosconsole | 12 | {robotics-dev} |
tango | 12 | {dataacquisition} |
apophenia | 11 | {statistics} |
- flann | 11 | {mathematics-dev,engineering-dev} |
getdp | 11 | {engineering,simulations,mathematics} |
polylib | 11 | {mathematics} |
- toulbar2 | 11 | {mathematics,numericalcomputation,logic,physics} |
- debian-science | 10 | {nanoscale-physics,economics,physics,machine-learning} |
debian-science | 10 | {physics,nanoscale-physics,economics,statistics} |
+ toulbar2 | 10 | {mathematics,numericalcomputation,logic,physics} |
uctodata | 10 | {linguistics} |
+ debian-science | 9 | {nanoscale-physics,economics,physics,machine-learning} |
libitpp | 9 | {mathematics-dev,engineering-dev} |
- psurface | 9 | {numericalcomputation} |
syrthes | 9 | {engineering} |
ucto | 9 | {linguistics} |
debian-science | 8 | {machine-learning,neuroscience-cognitive} |
@@ -66,21 +65,22 @@ Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
libcgns | 8 | {engineering} |
libm4ri | 8 | {mathematics-dev} |
lrcalc | 8 | {mathematics} |
+ psurface | 8 | {numericalcomputation} |
tango | 8 | {dataacquisition} |
astk | 7 | {engineering} |
code-saturne | 7 | {mathematics-dev,engineering-dev} |
- etsf-io | 7 | {nanoscale-physics,physics} |
ipe-tools | 7 | {typesetting} |
lxi-tools | 7 | {engineering,dataacquisition} |
+ pcl | 7 | {robotics-dev} |
scram | 7 | {engineering} |
cimg | 6 | {imageanalysis-dev} | {x11::library}
cliquer | 6 | {mathematics} |
dune-uggrid | 6 | {mathematics-dev} |
dxsamples | 6 | {nanoscale-physics} |
+ etsf-io | 6 | {nanoscale-physics,physics} |
libmatheval | 6 | {mathematics} |
muparser | 6 | {mathematics-dev} |
opencascade | 6 | {simulations} |
- pcl | 6 | {robotics-dev} |
python-escript | 6 | {numericalcomputation,engineering,simulations} |
teem | 6 | {imageanalysis} |
alberta | 5 | {engineering-dev} |
@@ -98,7 +98,6 @@ Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
cernlib | 4 | {highenergy-physics} |
coda | 4 | {meteorology} |
debian-science | 4 | {tools} |
- debian-science | 4 | {psychophysics} |
dimbl | 4 | {linguistics} |
dxflib | 4 | {engineering-dev} |
eclib | 4 | {mathematics-dev} |
@@ -113,8 +112,11 @@ Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
taurus | 4 | {dataacquisition} |
urdfdom-headers | 4 | {robotics-dev} |
apertium-streamparser | 3 | {linguistics} |
- debian-science | 3 | {electrophysiology} |
+ cernlib | 3 | {highenergy-physics} |
+ clhep | 3 | {highenergy-physics-dev} |
+ debian-science | 3 | {psychophysics} |
debian-science | 3 | {physics} |
+ debian-science | 3 | {electrophysiology} |
debian-science | 3 | {economics} |
hpcc | 3 | {numericalcomputation,distributedcomputing} |
libcgns | 3 | {engineering-dev} |
@@ -134,7 +136,6 @@ Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
x13as | 3 | {economics} |
apophenia | 2 | {statistics} |
cernlib | 2 | {highenergy-physics} |
- clhep | 2 | {highenergy-physics-dev} |
debian-science | 2 | {nanoscale-physics-dev} |
debian-science | 2 | {neuroscience-cognitive} |
dune-localfunctions | 2 | {mathematics-dev} |
@@ -225,9 +226,9 @@ Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
calculix-ccx-test | 0 | {simulations,engineering,numericalcomputation} |
cbflib | 0 | {nanoscale-physics-dev} |
+ cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {highenergy-physics,physics} |
cernlib | 0 | {highenergy-physics-dev} |
- cernlib | 0 | {highenergy-physics} |
ckon | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -248,13 +249,13 @@ Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
mclibs | 0 | {highenergy-physics} |
metis-edf | 0 | {engineering-dev} |
ompl | 0 | {robotics} |
- openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
openturns | 0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} |
+ openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
pycollada | 0 | {engineering-dev} |
python-escript | 0 | {simulations,engineering,numericalcomputation} |
qrupdate | 0 | {mathematics-dev} |
- ros-metapackages | 0 | {robotics-dev} |
ros-metapackages | 0 | {robotics} |
+ ros-metapackages | 0 | {robotics-dev} |
sagemath-database-combinatorial-designs | 0 | {mathematics} |
sagemath-database-conway-polynomials | 0 | {mathematics} |
sagemath-database-elliptic-curves | 0 | {mathematics} |
@@ -267,5 +268,5 @@ Last-Update: Fri, 15 Apr 2022 01:42:04 +0000
triangle | 0 | {physics-dev} |
trilinos | 0 | {physics-dev,mathematics-dev,engineering-dev} |
visp-images | 0 | {robotics-dev} |
-(299 rows)
+(300 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5927f0d63de7a4049f24ab3f9071cd4123e4b5ac
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5927f0d63de7a4049f24ab3f9071cd4123e4b5ac
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