[med-svn] [Git][med-team/adapterremoval][upstream] New upstream version 2.3.3

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / adapterremoval


Commits:
dd439107 by Andreas Tille at 2022-04-15T15:44:08+02:00
New upstream version 2.3.3
- - - - -


5 changed files:

- AdapterRemoval.1
- CHANGES.md
- docs/conf.py
- src/main.hpp
- tests/unit/catch.hpp


Changes:

=====================================
AdapterRemoval.1
=====================================
@@ -1,8 +1,5 @@
 .\" Man page generated from reStructuredText.
 .
-.TH "ADAPTERREMOVAL" "1" "Mar 17, 2021" "2.3.0" "AdapterRemoval"
-.SH NAME
-AdapterRemoval \- Fast short-read adapter trimming and processing
 .
 .nr rst2man-indent-level 0
 .
@@ -30,6 +27,9 @@ level margin: \\n[rst2man-indent\\n[rst2man-indent-level]]
 .\" new: \\n[rst2man-indent\\n[rst2man-indent-level]]
 .in \\n[rst2man-indent\\n[rst2man-indent-level]]u
 ..
+.TH "ADAPTERREMOVAL" "1" "Apr 15, 2022" "2.3.3" "AdapterRemoval"
+.SH NAME
+AdapterRemoval \- Fast short-read adapter trimming and processing
 .SH SYNOPSIS
 .sp
 \fBAdapterRemoval\fP [\fIoptions\fP\&...] \-\-file1 <\fIfilenames\fP> [\-\-file2 <\fIfilenames\fP>]


=====================================
CHANGES.md
=====================================
@@ -1,3 +1,7 @@
+### Version 2.3.3 - 2022-04-15
+
+  * Updated Catch2 to fix compilation with glibc 2.34, courtesy of loganrosen. 
+
 ### Version 2.3.2 - 2021-03-17
 
  * Improved error messages when AdapterRemoval failed to open or write FASTQ


=====================================
docs/conf.py
=====================================
@@ -54,9 +54,9 @@ author = u'Mikkel Schubert; Stinus Lindgreen'
 # built documents.
 #
 # The short X.Y version.
-version = u'2.3.2'
+version = u'2.3.3'
 # The full version, including alpha/beta/rc tags.
-release = u'2.3.2'
+release = u'2.3.3'
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.


=====================================
src/main.hpp
=====================================
@@ -31,7 +31,7 @@ namespace ar
 {
 
 const std::string NAME = "AdapterRemoval";
-const std::string VERSION = "ver. 2.3.2";
+const std::string VERSION = "ver. 2.3.3";
 const std::string HELPTEXT = \
     "This program searches for and removes remnant adapter sequences from\n"
     "your read data.  The program can analyze both single end and paired end\n"


=====================================
tests/unit/catch.hpp
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/adapterremoval/-/commit/dd439107c0050e20fdd33a2a5e06acbcc129e3ab

-- 
View it on GitLab: https://salsa.debian.org/med-team/adapterremoval/-/commit/dd439107c0050e20fdd33a2a5e06acbcc129e3ab
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