Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
1e7aba88 by Andreas Tille at 2022-04-21T13:42:31+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,13 +1,13 @@
-Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
+Last-Update: Thu, 21 Apr 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 184 | {imaging,covid-19} |
+ dcmtk | 181 | {imaging,covid-19} |
orthanc | 100 | {imaging,covid-19,practice} |
orthanc-wsi | 48 | {laboratory,practice,imaging,covid-19,oncology,his} |
- dicom3tools | 26 | {imaging} |
- dicomscope | 26 | {imaging} |
amide | 25 | {imaging} |
+ dicom3tools | 25 | {imaging} |
+ dicomscope | 25 | {imaging} |
dcm2niix | 19 | {imaging} |
orthanc-webviewer | 16 | {imaging} |
mrtrix3 | 13 | {imaging} |
@@ -15,54 +15,54 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
dicomnifti | 10 | {imaging} |
minc-tools | 10 | {imaging} |
nifti2dicom | 10 | {imaging} |
- biojava-live | 9 | {bio-dev} |
openslide | 9 | {imaging-dev} |
orthanc-dicomweb | 9 | {covid-19,imaging} |
+ treeview | 9 | {bio,bio-phylogeny} |
+ biojava-live | 8 | {bio-dev} |
gdcm | 8 | {imaging-dev} |
+ gdcm | 8 | {imaging,covid-19} |
invesalius | 8 | {imaging} |
- libminc | 8 | {imaging-dev} |
nifti2dicom | 8 | {imaging} |
orthanc-postgresql | 8 | {imaging} |
pixelmed | 8 | {imaging} |
- treeview | 8 | {bio,bio-phylogeny} |
dicompyler | 7 | {oncology} |
- gdcm | 7 | {imaging,covid-19} |
+ jebl2 | 7 | {bio-dev} |
+ libminc | 7 | {imaging-dev} |
mia | 7 | {imaging} |
- obitools | 7 | {bio} |
- oscar | 7 | {data,practice,tools} |
+ nipype | 7 | {imaging,imaging-dev} |
+ orthanc-mysql | 7 | {imaging} |
canu | 6 | {bio} |
- embassy-domsearch | 6 | {cloud,bio} |
- getdata | 6 | {bio} |
ghmm | 6 | {bio} |
- jebl2 | 6 | {bio-dev} |
lamarc | 6 | {bio} |
libncl | 6 | {bio} |
librg-utils-perl | 6 | {bio} |
nifticlib | 6 | {imaging-dev} |
+ obitools | 6 | {bio} |
openslide | 6 | {imaging} |
orthanc-gdcm | 6 | {imaging} |
- orthanc-mysql | 6 | {imaging} |
+ oscar | 6 | {data,practice,tools} |
plastimatch | 6 | {imaging} |
runcircos-gui | 6 | {bio} |
salmon | 6 | {bio,covid-19} |
stacks | 6 | {bio} |
- adun.app | 5 | {bio} |
- bio-tradis | 5 | {bio-dev,bio} |
bitseq | 5 | {bio} |
cmtk | 5 | {imaging} |
embassy-domainatrix | 5 | {bio,cloud} |
+ embassy-domsearch | 5 | {cloud,bio} |
+ getdata | 5 | {bio} |
ipig | 5 | {bio} |
mauve-aligner | 5 | {bio} |
melting | 5 | {bio,cloud} |
mhap | 5 | {bio-ngs,bio} |
nifticlib | 5 | {imaging} |
- nipype | 5 | {imaging,imaging-dev} |
phyutility | 5 | {cloud,bio} |
piler | 5 | {bio} |
rtax | 5 | {cloud,bio} |
saint | 5 | {bio} |
staden | 5 | {bio} |
+ adun.app | 4 | {bio} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
+ bio-tradis | 4 | {bio-dev,bio} |
blimps | 4 | {bio} |
brig | 4 | {bio} |
clonalframeml | 4 | {bio,covid-19} |
@@ -82,7 +82,6 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
anfo | 3 | {bio,cloud} |
arden | 3 | {bio,cloud} |
biomaj3-cli | 3 | {cloud} |
- cat-bat | 3 | {covid-19,bio} |
elastix | 3 | {imaging} |
jmodeltest | 3 | {bio,bio-phylogeny} |
libpal-java | 3 | {bio-dev} |
@@ -107,9 +106,9 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
zalign | 3 | {cloud,bio} |
assemblytics | 2 | {bio} |
bart-view | 2 | {imaging} |
+ cat-bat | 2 | {covid-19,bio} |
cufflinks | 2 | {bio,cloud} |
dextractor | 2 | {covid-19,bio} |
- emboss-explorer | 2 | {bio} |
emmax | 2 | {bio} |
king | 2 | {imaging,typesetting} |
kmerresistance | 2 | {bio} |
@@ -125,16 +124,18 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
skesa | 2 | {bio} |
thesias | 2 | {bio,covid-19} |
tophat-recondition | 2 | {covid-19,bio} |
- varna | 2 | {bio} |
+ emboss-explorer | 1 | {bio} |
emperor | 1 | {bio} |
htscodecs | 1 | {covid-19,bio-dev} |
libchado-perl | 1 | {bio-dev} |
+ libctapimkt | 1 | {practice} |
mssstest | 1 | {tools} |
opensurgsim | 1 | {imaging-dev} |
papyrus | 1 | {imaging-dev} |
plasmidid | 1 | {covid-19,bio} |
seq-gen | 1 | {bio} |
srf | 1 | {bio-dev} |
+ varna | 1 | {bio} |
varscan | 1 | {bio,covid-19} |
acedb | 0 | {bio,cloud} |
bambamc | 0 | {bio-dev} |
@@ -157,7 +158,6 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
libbpp-raa | 0 | {bio-dev} |
libbpp-seq | 0 | {bio-dev} |
libbpp-seq-omics | 0 | {bio-dev} |
- libctapimkt | 0 | {practice} |
libgkarrays | 0 | {bio-dev} |
libhmsbeagle | 0 | {bio-dev} |
libics | 0 | {imaging-dev,covid-19} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,92 +1,92 @@
-Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
+Last-Update: Thu, 21 Apr 2022 13:42:05 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 3040 | {viewing} |
- sympy | 1863 | {physics,nanoscale-physics} |
- suitesparse | 253 | {mathematics-dev,numericalcomputation} |
+ gts | 3059 | {viewing} |
+ sympy | 1804 | {physics,nanoscale-physics} |
+ suitesparse | 258 | {mathematics-dev,numericalcomputation} |
armadillo | 219 | {mathematics-dev} |
- python-pyqtgraph | 147 | {viewing} |
- atlas | 88 | {mathematics-dev} |
- nltk | 66 | {linguistics} |
+ python-pyqtgraph | 145 | {viewing} |
+ atlas | 92 | {mathematics-dev} |
+ nltk | 67 | {linguistics} |
arpack | 63 | {mathematics-dev} |
- arduino-mk | 55 | {robotics} |
- cypari2 | 55 | {mathematics-dev} |
- imview | 48 | {viewing} |
+ cypari2 | 57 | {mathematics-dev} |
+ arduino-mk | 54 | {robotics} |
+ imview | 46 | {viewing} |
pyzo | 44 | {numericalcomputation} |
- rubiks | 41 | {geometry,mathematics} |
- flintqs | 37 | {mathematics} |
- eclib | 36 | {mathematics} |
- fftw | 33 | {mathematics-dev,meteorology-dev,physics-dev} |
- sketch | 23 | {typesetting} |
+ rubiks | 40 | {geometry,mathematics} |
+ flintqs | 36 | {mathematics} |
+ eclib | 34 | {mathematics} |
+ fftw | 34 | {mathematics-dev,meteorology-dev,physics-dev} |
+ sketch | 25 | {typesetting} |
geg | 21 | {viewing} |
+ guidata | 21 | {dataacquisition-dev} |
+ guiqwt | 21 | {numericalcomputation,viewing} |
cernlib | 20 | {highenergy-physics} |
feedgnuplot | 20 | {viewing} |
- guidata | 20 | {dataacquisition-dev} |
- guiqwt | 20 | {numericalcomputation,viewing} |
neuron | 20 | {neuroscience-modeling,highenergy-physics,simulations} |
gts | 19 | {viewing-dev} |
- vitables | 18 | {numericalcomputation} |
+ vitables | 19 | {numericalcomputation} |
bossa | 16 | {devices} |
gfsview | 16 | {viewing} |
ntl | 16 | {mathematics-dev} |
opencascade | 16 | {simulations} |
- ros-ros-environment | 16 | {robotics-dev} |
coinor-symphony | 15 | {mathematics,logic,numericalcomputation} |
form | 15 | {mathematics} |
libmatio | 15 | {mathematics-dev} |
matlab-support | 15 | {mathematics,numericalcomputation} |
picosat | 15 | {logic} |
+ ros-ros-environment | 15 | {robotics-dev} |
cernlib | 14 | {highenergy-physics-dev} |
fftw | 14 | {mathematics-dev,meteorology-dev,physics-dev} |
+ flann | 14 | {mathematics-dev,engineering-dev} |
mathgl | 14 | {viewing} |
ppl | 14 | {numericalcomputation} |
- auto-07p | 13 | {mathematics} |
- flann | 13 | {mathematics-dev,engineering-dev} |
+ ros-rosconsole | 14 | {robotics-dev} |
neuron | 13 | {highenergy-physics-dev} |
- ros-rosconsole | 13 | {robotics-dev} |
+ auto-07p | 12 | {mathematics} |
rheolef | 12 | {mathematics} |
- tango | 12 | {dataacquisition} |
apophenia | 11 | {statistics} |
debian-science | 11 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
getdp | 11 | {engineering,simulations,mathematics} |
libm4ri | 11 | {mathematics-dev} |
opticalraytracer | 11 | {physics} |
polylib | 11 | {mathematics} |
+ tango | 11 | {dataacquisition} |
uctodata | 11 | {linguistics} |
debian-science | 10 | {physics,nanoscale-physics,economics,statistics} |
- libcgns | 10 | {engineering} |
libitpp | 10 | {mathematics-dev,engineering-dev} |
- syrthes | 10 | {engineering} |
ucto | 10 | {linguistics} |
jeuclid | 9 | {viewing,typesetting} |
- scalapack | 9 | {nanoscale-physics-dev} |
+ libcgns | 9 | {engineering} |
+ pcl | 9 | {robotics-dev} |
toulbar2 | 9 | {mathematics,numericalcomputation,logic,physics} |
code-saturne | 8 | {mathematics-dev,engineering-dev} |
debian-science | 8 | {nanoscale-physics,economics,physics,machine-learning} |
debian-science | 8 | {machine-learning,neuroscience-cognitive} |
+ ipe-tools | 8 | {typesetting} |
lrcalc | 8 | {mathematics} |
- lxi-tools | 8 | {engineering,dataacquisition} |
- pcl | 8 | {robotics-dev} |
+ scalapack | 8 | {nanoscale-physics-dev} |
+ syrthes | 8 | {engineering} |
+ tango | 8 | {dataacquisition} |
teem | 8 | {imageanalysis} |
astk | 7 | {engineering} |
- cimg | 7 | {imageanalysis-dev} | {x11::library}
- ipe-tools | 7 | {typesetting} |
libvigraimpex | 7 | {imageanalysis-dev,machine-learning} |
+ lxi-tools | 7 | {engineering,dataacquisition} |
muparser | 7 | {mathematics-dev} |
psurface | 7 | {numericalcomputation} |
scram | 7 | {engineering} |
- tango | 7 | {dataacquisition} |
+ cimg | 6 | {imageanalysis-dev} | {x11::library}
+ dune-istl | 6 | {mathematics-dev} |
+ dune-uggrid | 6 | {mathematics-dev} |
dxsamples | 6 | {nanoscale-physics} |
libmatheval | 6 | {mathematics} |
opencascade | 6 | {simulations} |
- cernlib | 5 | {highenergy-physics} |
+ alberta | 5 | {engineering-dev} |
cliquer | 5 | {mathematics} |
coinmp | 5 | {numericalcomputation,logic,mathematics-dev} |
debian-science | 5 | {electrophysiology} |
dimbl | 5 | {linguistics} |
- dune-istl | 5 | {mathematics-dev} |
- dune-uggrid | 5 | {mathematics-dev} |
dxflib | 5 | {engineering-dev} |
etsf-io | 5 | {nanoscale-physics,physics} |
frog | 5 | {linguistics} |
@@ -97,15 +97,12 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
python-escript | 5 | {numericalcomputation,engineering,simulations} |
sac2mseed | 5 | {geography} |
simbody | 5 | {robotics-dev} |
- alberta | 4 | {engineering-dev} |
apertium-streamparser | 4 | {linguistics} |
- cbflib | 4 | {nanoscale-physics} |
+ cernlib | 4 | {highenergy-physics} |
clhep | 4 | {highenergy-physics-dev} |
- coda | 4 | {meteorology} |
- coda | 4 | {meteorology-dev} |
debian-science | 4 | {electrophysiology} |
- debian-science | 4 | {psychophysics} |
debian-science | 4 | {tools} |
+ debian-science | 4 | {psychophysics} |
eclib | 4 | {mathematics-dev} |
libgetdata | 4 | {dataacquisition} |
libgtkdatabox | 4 | {engineering-dev,viewing-dev} |
@@ -122,9 +119,13 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
timblserver | 4 | {linguistics} |
urdfdom-headers | 4 | {robotics-dev} |
x13as | 4 | {economics} |
+ cbflib | 3 | {nanoscale-physics} |
cernlib | 3 | {highenergy-physics} |
cliquer | 3 | {mathematics-dev} |
+ coda | 3 | {meteorology} |
+ coda | 3 | {meteorology-dev} |
debian-science | 3 | {nanoscale-physics-dev} |
+ dune-localfunctions | 3 | {mathematics-dev} |
fastjet | 3 | {highenergy-physics-dev} |
gf2x | 3 | {mathematics-dev} |
hpcc | 3 | {numericalcomputation,distributedcomputing} |
@@ -143,14 +144,14 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
tango | 3 | {dataacquisition-dev} |
apophenia | 2 | {statistics} |
cernlib | 2 | {highenergy-physics} |
- debian-science | 2 | {physics} |
debian-science | 2 | {neuroscience-cognitive} |
+ debian-science | 2 | {physics} |
debian-science | 2 | {economics} |
- dune-localfunctions | 2 | {mathematics-dev} |
harp | 2 | {meteorology} |
libccp4 | 2 | {nanoscale-physics-dev} |
libgetdata | 2 | {dataacquisition-dev} |
libhomfly | 2 | {mathematics-dev} |
+ liblxi | 2 | {dataacquisition-dev,engineering-dev} |
libvigraimpex | 2 | {imageanalysis-dev,machine-learning} |
ompl | 2 | {robotics-dev} |
openctm | 2 | {physics-dev} |
@@ -159,6 +160,7 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
sparskit | 2 | {mathematics-dev} |
ssm | 2 | {nanoscale-physics} |
asl | 1 | {physics-dev} |
+ cernlib | 1 | {highenergy-physics} |
ckon | 1 | {highenergy-physics-dev} |
cld2 | 1 | {linguistics} |
clipper | 1 | {nanoscale-physics-dev} |
@@ -167,14 +169,16 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
collada-dom | 1 | {viewing-dev} |
cqrlib | 1 | {mathematics-dev} |
cvector | 1 | {mathematics-dev} |
+ dune-functions | 1 | {mathematics-dev} |
+ dune-typetree | 1 | {mathematics-dev} |
frogdata | 1 | {linguistics} |
gemmlowp | 1 | {mathematics-dev} |
itsol | 1 | {mathematics-dev} |
jhdf | 1 | {engineering} |
jhdf | 1 | {engineering-dev} |
liblbfgs | 1 | {mathematics-dev} |
- liblxi | 1 | {dataacquisition-dev,engineering-dev} |
liborigin2 | 1 | {viewing-dev} |
+ libxsmm | 1 | {mathematics-dev} |
metis-edf | 1 | {numericalcomputation,engineering} |
neartree | 1 | {numericalcomputation,mathematics-dev} |
openigtlink | 1 | {robotics-dev} |
@@ -226,16 +230,14 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
calculix-ccx-test | 0 | {simulations,engineering,numericalcomputation} |
cbflib | 0 | {nanoscale-physics-dev} |
- cernlib | 0 | {highenergy-physics,physics} |
cernlib | 0 | {highenergy-physics} |
+ cernlib | 0 | {highenergy-physics,physics} |
cernlib | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
code-saturne | 0 | {engineering} |
- dune-functions | 0 | {mathematics-dev} |
dune-grid-glue | 0 | {mathematics-dev} |
dune-pdelab | 0 | {mathematics-dev} |
- dune-typetree | 0 | {mathematics-dev} |
etsf-io | 0 | {nanoscale-physics-dev} |
fastjet | 0 | {highenergy-physics-dev} |
glpk-java | 0 | {mathematics-dev} |
@@ -245,7 +247,6 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
libquantum | 0 | {numericalcomputation} |
librsl | 0 | {meteorology-dev} |
libsdsl | 0 | {dataacquisition-dev} |
- libxsmm | 0 | {mathematics-dev} |
looptools | 0 | {highenergy-physics-dev} |
mclibs | 0 | {highenergy-physics} |
metis-edf | 0 | {engineering-dev} |
@@ -267,5 +268,5 @@ Last-Update: Thu, 21 Apr 2022 01:42:04 +0000
triangle | 0 | {physics-dev} |
trilinos | 0 | {physics-dev,mathematics-dev,engineering-dev} |
visp-images | 0 | {robotics-dev} |
-(299 rows)
+(300 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1e7aba883cf625951e4f51dee98d3e7cf8567a70
--
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