Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
2c308d7f by Andreas Tille at 2022-04-23T13:42:24+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,55 +1,56 @@
-Last-Update: Sat, 23 Apr 2022 01:42:03 +0000
+Last-Update: Sat, 23 Apr 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 179 | {imaging,covid-19} |
- orthanc | 99 | {imaging,covid-19,practice} |
- orthanc-wsi | 48 | {laboratory,practice,imaging,covid-19,oncology,his} |
+ dcmtk | 180 | {imaging,covid-19} |
+ orthanc | 100 | {imaging,covid-19,practice} |
+ orthanc-wsi | 49 | {laboratory,practice,imaging,covid-19,oncology,his} |
amide | 26 | {imaging} |
- dicom3tools | 26 | {imaging} |
dicomscope | 26 | {imaging} |
+ dicom3tools | 25 | {imaging} |
dcm2niix | 19 | {imaging} |
- orthanc-webviewer | 16 | {imaging} |
+ orthanc-webviewer | 17 | {imaging} |
mrtrix3 | 13 | {imaging} |
dicomnifti | 11 | {imaging} |
gnumed-server | 11 | {practice,covid-19} |
minc-tools | 11 | {imaging} |
invesalius | 10 | {imaging} |
nifti2dicom | 10 | {imaging} |
+ nipype | 10 | {imaging,imaging-dev} |
+ orthanc-dicomweb | 10 | {covid-19,imaging} |
+ pixelmed | 10 | {imaging} |
+ gdcm | 9 | {imaging,covid-19} |
openslide | 9 | {imaging-dev} |
- orthanc-dicomweb | 9 | {covid-19,imaging} |
- pixelmed | 9 | {imaging} |
+ orthanc-postgresql | 9 | {imaging} |
treeview | 9 | {bio,bio-phylogeny} |
biojava-live | 8 | {bio-dev} |
- gdcm | 8 | {imaging,covid-19} |
gdcm | 8 | {imaging-dev} |
mia | 8 | {imaging} |
nifti2dicom | 8 | {imaging} |
- nipype | 8 | {imaging,imaging-dev} |
- orthanc-postgresql | 8 | {imaging} |
+ orthanc-mysql | 8 | {imaging} |
dicompyler | 7 | {oncology} |
jebl2 | 7 | {bio-dev} |
libminc | 7 | {imaging-dev} |
librg-utils-perl | 7 | {bio} |
+ obitools | 7 | {bio} |
openslide | 7 | {imaging} |
- orthanc-mysql | 7 | {imaging} |
plastimatch | 7 | {imaging} |
runcircos-gui | 7 | {bio} |
canu | 6 | {bio} |
+ embassy-domsearch | 6 | {cloud,bio} |
+ getdata | 6 | {bio} |
ghmm | 6 | {bio} |
lamarc | 6 | {bio} |
libncl | 6 | {bio} |
nifticlib | 6 | {imaging} |
- obitools | 6 | {bio} |
orthanc-gdcm | 6 | {imaging} |
oscar | 6 | {data,practice,tools} |
- salmon | 6 | {bio,covid-19} |
+ saint | 6 | {bio} |
stacks | 6 | {bio} |
+ bio-tradis | 5 | {bio-dev,bio} |
bitseq | 5 | {bio} |
cmtk | 5 | {imaging} |
embassy-domainatrix | 5 | {bio,cloud} |
- embassy-domsearch | 5 | {cloud,bio} |
- getdata | 5 | {bio} |
ipig | 5 | {bio} |
mauve-aligner | 5 | {bio} |
melting | 5 | {bio,cloud} |
@@ -58,11 +59,10 @@ Last-Update: Sat, 23 Apr 2022 01:42:03 +0000
phyutility | 5 | {cloud,bio} |
piler | 5 | {bio} |
rtax | 5 | {cloud,bio} |
- saint | 5 | {bio} |
+ salmon | 5 | {bio,covid-19} |
staden | 5 | {bio} |
adun.app | 4 | {bio} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
- bio-tradis | 4 | {bio-dev,bio} |
blimps | 4 | {bio} |
brig | 4 | {bio} |
clonalframeml | 4 | {bio,covid-19} |
@@ -82,6 +82,8 @@ Last-Update: Sat, 23 Apr 2022 01:42:03 +0000
anfo | 3 | {bio,cloud} |
arden | 3 | {bio,cloud} |
biomaj3-cli | 3 | {cloud} |
+ cat-bat | 3 | {covid-19,bio} |
+ dextractor | 3 | {covid-19,bio} |
elastix | 3 | {imaging} |
jmodeltest | 3 | {bio,bio-phylogeny} |
king | 3 | {imaging,typesetting} |
@@ -101,15 +103,13 @@ Last-Update: Sat, 23 Apr 2022 01:42:03 +0000
spread-phy | 3 | {bio-phylogeny,bio} |
suitename | 3 | {bio} |
surankco | 3 | {bio} |
- trace2dbest | 3 | {bio} |
tracetuner | 3 | {bio} |
tvc | 3 | {bio} |
zalign | 3 | {cloud,bio} |
assemblytics | 2 | {bio} |
bart-view | 2 | {imaging} |
- cat-bat | 2 | {covid-19,bio} |
cufflinks | 2 | {bio,cloud} |
- dextractor | 2 | {covid-19,bio} |
+ emboss-explorer | 2 | {bio} |
emmax | 2 | {bio} |
kmerresistance | 2 | {bio} |
libbio-mage-utils-perl | 2 | {bio-dev} |
@@ -120,11 +120,10 @@ Last-Update: Sat, 23 Apr 2022 01:42:03 +0000
pique | 2 | {bio} |
pplacer | 2 | {covid-19,bio-phylogeny,bio} |
pymia | 2 | {imaging-dev} |
- python-wdlparse | 2 | {bio-dev} |
skesa | 2 | {bio} |
thesias | 2 | {bio,covid-19} |
tophat-recondition | 2 | {covid-19,bio} |
- emboss-explorer | 1 | {bio} |
+ trace2dbest | 2 | {bio} |
emperor | 1 | {bio} |
htscodecs | 1 | {covid-19,bio-dev} |
libchado-perl | 1 | {bio-dev} |
@@ -133,6 +132,7 @@ Last-Update: Sat, 23 Apr 2022 01:42:03 +0000
opensurgsim | 1 | {imaging-dev} |
papyrus | 1 | {imaging-dev} |
plasmidid | 1 | {covid-19,bio} |
+ python-wdlparse | 1 | {bio-dev} |
seq-gen | 1 | {bio} |
srf | 1 | {bio-dev} |
varna | 1 | {bio} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,110 +1,114 @@
-Last-Update: Sat, 23 Apr 2022 01:42:04 +0000
+Last-Update: Sat, 23 Apr 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 3081 | {viewing} |
- sympy | 1733 | {physics,nanoscale-physics} |
- suitesparse | 252 | {mathematics-dev,numericalcomputation} |
- armadillo | 217 | {mathematics-dev} |
- python-pyqtgraph | 146 | {viewing} |
- atlas | 93 | {mathematics-dev} |
- nltk | 68 | {linguistics} |
- arpack | 63 | {mathematics-dev} |
- cypari2 | 57 | {mathematics-dev} |
- arduino-mk | 53 | {robotics} |
- imview | 49 | {viewing} |
- pyzo | 43 | {numericalcomputation} |
- rubiks | 39 | {geometry,mathematics} |
- flintqs | 35 | {mathematics} |
+ gts | 3061 | {viewing} |
+ sympy | 1686 | {physics,nanoscale-physics} |
+ suitesparse | 254 | {mathematics-dev,numericalcomputation} |
+ armadillo | 215 | {mathematics-dev} |
+ python-pyqtgraph | 147 | {viewing} |
+ atlas | 90 | {mathematics-dev} |
+ nltk | 69 | {linguistics} |
+ arpack | 62 | {mathematics-dev} |
+ cypari2 | 54 | {mathematics-dev} |
+ arduino-mk | 51 | {robotics} |
+ imview | 50 | {viewing} |
+ pyzo | 45 | {numericalcomputation} |
+ rubiks | 40 | {geometry,mathematics} |
+ flintqs | 36 | {mathematics} |
fftw | 34 | {mathematics-dev,meteorology-dev,physics-dev} |
- eclib | 32 | {mathematics} |
- sketch | 24 | {typesetting} |
- geg | 21 | {viewing} |
- cernlib | 20 | {highenergy-physics} |
- feedgnuplot | 20 | {viewing} |
- guidata | 20 | {dataacquisition-dev} |
- guiqwt | 20 | {numericalcomputation,viewing} |
- neuron | 20 | {neuroscience-modeling,highenergy-physics,simulations} |
- gts | 19 | {viewing-dev} |
- vitables | 19 | {numericalcomputation} |
- bossa | 15 | {devices} |
- coinor-symphony | 15 | {mathematics,logic,numericalcomputation} |
+ eclib | 33 | {mathematics} |
+ sketch | 25 | {typesetting} |
+ geg | 22 | {viewing} |
+ neuron | 22 | {neuroscience-modeling,highenergy-physics,simulations} |
+ feedgnuplot | 21 | {viewing} |
+ guidata | 21 | {dataacquisition-dev} |
+ guiqwt | 21 | {numericalcomputation,viewing} |
+ gts | 20 | {viewing-dev} |
+ vitables | 20 | {numericalcomputation} |
+ cernlib | 17 | {highenergy-physics} |
+ coinor-symphony | 16 | {mathematics,logic,numericalcomputation} |
+ gfsview | 16 | {viewing} |
form | 15 | {mathematics} |
- gfsview | 15 | {viewing} |
libmatio | 15 | {mathematics-dev} |
+ mathgl | 15 | {viewing} |
ntl | 15 | {mathematics-dev} |
opencascade | 15 | {simulations} |
+ ros-rosconsole | 15 | {robotics-dev} |
ros-ros-environment | 15 | {robotics-dev} |
- cernlib | 14 | {highenergy-physics-dev} |
+ bossa | 14 | {devices} |
fftw | 14 | {mathematics-dev,meteorology-dev,physics-dev} |
flann | 14 | {mathematics-dev,engineering-dev} |
- mathgl | 14 | {viewing} |
+ neuron | 14 | {highenergy-physics-dev} |
picosat | 14 | {logic} |
- ros-rosconsole | 14 | {robotics-dev} |
+ ppl | 14 | {numericalcomputation} |
matlab-support | 13 | {mathematics,numericalcomputation} |
- neuron | 13 | {highenergy-physics-dev} |
- ppl | 13 | {numericalcomputation} |
+ apophenia | 12 | {statistics} |
auto-07p | 12 | {mathematics} |
+ debian-science | 12 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
+ getdp | 12 | {engineering,simulations,mathematics} |
rheolef | 12 | {mathematics} |
- apophenia | 11 | {statistics} |
- debian-science | 11 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
- getdp | 11 | {engineering,simulations,mathematics} |
+ tango | 12 | {dataacquisition} |
+ uctodata | 12 | {linguistics} |
+ cernlib | 11 | {highenergy-physics-dev} |
libm4ri | 11 | {mathematics-dev} |
opticalraytracer | 11 | {physics} |
polylib | 11 | {mathematics} |
- tango | 11 | {dataacquisition} |
- uctodata | 11 | {linguistics} |
+ ucto | 11 | {linguistics} |
debian-science | 10 | {physics,nanoscale-physics,economics,statistics} |
- ucto | 10 | {linguistics} |
+ toulbar2 | 10 | {mathematics,numericalcomputation,logic,physics} |
+ debian-science | 9 | {nanoscale-physics,economics,physics,machine-learning} |
+ jeuclid | 9 | {viewing,typesetting} |
libcgns | 9 | {engineering} |
libitpp | 9 | {mathematics-dev,engineering-dev} |
pcl | 9 | {robotics-dev} |
- toulbar2 | 9 | {mathematics,numericalcomputation,logic,physics} |
+ scalapack | 9 | {nanoscale-physics-dev} |
+ teem | 9 | {imageanalysis} |
code-saturne | 8 | {mathematics-dev,engineering-dev} |
- debian-science | 8 | {nanoscale-physics,economics,physics,machine-learning} |
- jeuclid | 8 | {viewing,typesetting} |
+ debian-science | 8 | {machine-learning,neuroscience-cognitive} |
lrcalc | 8 | {mathematics} |
- scalapack | 8 | {nanoscale-physics-dev} |
+ lxi-tools | 8 | {engineering,dataacquisition} |
+ psurface | 8 | {numericalcomputation} |
syrthes | 8 | {engineering} |
tango | 8 | {dataacquisition} |
- teem | 8 | {imageanalysis} |
astk | 7 | {engineering} |
- debian-science | 7 | {machine-learning,neuroscience-cognitive} |
- libvigraimpex | 7 | {imageanalysis-dev,machine-learning} |
- lxi-tools | 7 | {engineering,dataacquisition} |
- muparser | 7 | {mathematics-dev} |
- psurface | 7 | {numericalcomputation} |
+ ipe-tools | 7 | {typesetting} |
+ libmatheval | 7 | {mathematics} |
scram | 7 | {engineering} |
cimg | 6 | {imageanalysis-dev} | {x11::library}
+ cliquer | 6 | {mathematics} |
+ debian-science | 6 | {electrophysiology} |
dune-istl | 6 | {mathematics-dev} |
dune-uggrid | 6 | {mathematics-dev} |
dxsamples | 6 | {nanoscale-physics} |
- ipe-tools | 6 | {typesetting} |
- libmatheval | 6 | {mathematics} |
+ frog | 6 | {linguistics} |
+ libvigraimpex | 6 | {imageanalysis-dev,machine-learning} |
+ muparser | 6 | {mathematics-dev} |
opencascade | 6 | {simulations} |
+ python-escript | 6 | {numericalcomputation,engineering,simulations} |
alberta | 5 | {engineering-dev} |
- cliquer | 5 | {mathematics} |
+ cernlib | 5 | {highenergy-physics} |
debian-science | 5 | {psychophysics} |
- debian-science | 5 | {electrophysiology} |
+ debian-science | 5 | {tools} |
dimbl | 5 | {linguistics} |
etsf-io | 5 | {nanoscale-physics,physics} |
- frog | 5 | {linguistics} |
irstlm | 5 | {linguistics} |
+ libgetdata | 5 | {dataacquisition} |
mbt | 5 | {linguistics} |
morse-simulator | 5 | {robotics} |
openmx | 5 | {physics,nanoscale-physics} |
- python-escript | 5 | {numericalcomputation,engineering,simulations} |
sac2mseed | 5 | {geography} |
simbody | 5 | {robotics-dev} |
apertium-streamparser | 4 | {linguistics} |
- cernlib | 4 | {highenergy-physics} |
+ cbflib | 4 | {nanoscale-physics} |
clhep | 4 | {highenergy-physics-dev} |
+ coda | 4 | {meteorology} |
+ coda | 4 | {meteorology-dev} |
coinmp | 4 | {numericalcomputation,logic,mathematics-dev} |
- debian-science | 4 | {tools} |
debian-science | 4 | {electrophysiology} |
dxflib | 4 | {engineering-dev} |
eclib | 4 | {mathematics-dev} |
- libgetdata | 4 | {dataacquisition} |
+ libgtkdatabox | 4 | {engineering-dev,viewing-dev} |
libm4rie | 4 | {mathematics-dev} |
libmatheval | 4 | {mathematics-dev} |
libzn-poly | 4 | {mathematics-dev} |
@@ -117,11 +121,8 @@ Last-Update: Sat, 23 Apr 2022 01:42:04 +0000
timbl | 4 | {linguistics} |
timblserver | 4 | {linguistics} |
x13as | 4 | {economics} |
- cbflib | 3 | {nanoscale-physics} |
cernlib | 3 | {highenergy-physics} |
cliquer | 3 | {mathematics-dev} |
- coda | 3 | {meteorology-dev} |
- coda | 3 | {meteorology} |
debian-science | 3 | {nanoscale-physics-dev} |
dune-localfunctions | 3 | {mathematics-dev} |
gf2x | 3 | {mathematics-dev} |
@@ -131,7 +132,6 @@ Last-Update: Sat, 23 Apr 2022 01:42:04 +0000
libbraiding | 3 | {mathematics-dev} |
libcgns | 3 | {engineering-dev} |
libgetdata | 3 | {dataacquisition-dev} |
- libgtkdatabox | 3 | {engineering-dev,viewing-dev} |
looptools | 3 | {highenergy-physics-dev} |
lrcalc | 3 | {mathematics-dev} |
mrmpi | 3 | {tools} |
@@ -142,13 +142,12 @@ Last-Update: Sat, 23 Apr 2022 01:42:04 +0000
urdfdom-headers | 3 | {robotics-dev} |
apophenia | 2 | {statistics} |
cernlib | 2 | {highenergy-physics} |
- debian-science | 2 | {neuroscience-cognitive} |
debian-science | 2 | {physics} |
+ debian-science | 2 | {neuroscience-cognitive} |
debian-science | 2 | {economics} |
fastjet | 2 | {highenergy-physics-dev} |
harp | 2 | {meteorology} |
libccp4 | 2 | {nanoscale-physics-dev} |
- libgetdata | 2 | {dataacquisition-dev} |
libhomfly | 2 | {mathematics-dev} |
liblxi | 2 | {dataacquisition-dev,engineering-dev} |
libvigraimpex | 2 | {imageanalysis-dev,machine-learning} |
@@ -159,7 +158,6 @@ Last-Update: Sat, 23 Apr 2022 01:42:04 +0000
sparskit | 2 | {mathematics-dev} |
ssm | 2 | {nanoscale-physics} |
asl | 1 | {physics-dev} |
- cernlib | 1 | {highenergy-physics} |
ckon | 1 | {highenergy-physics-dev} |
cld2 | 1 | {linguistics} |
clipper | 1 | {nanoscale-physics-dev} |
@@ -173,8 +171,9 @@ Last-Update: Sat, 23 Apr 2022 01:42:04 +0000
frogdata | 1 | {linguistics} |
gemmlowp | 1 | {mathematics-dev} |
itsol | 1 | {mathematics-dev} |
- jhdf | 1 | {engineering-dev} |
jhdf | 1 | {engineering} |
+ jhdf | 1 | {engineering-dev} |
+ libgetdata | 1 | {dataacquisition-dev} |
liblbfgs | 1 | {mathematics-dev} |
liborigin2 | 1 | {viewing-dev} |
metis-edf | 1 | {numericalcomputation,engineering} |
@@ -184,7 +183,6 @@ Last-Update: Sat, 23 Apr 2022 01:42:04 +0000
psurface | 1 | {numericalcomputation} |
pycollada | 1 | {engineering-dev} |
pynac | 1 | {mathematics-dev} |
- python-aws-xray-sdk | 1 | {dataacquisition-dev} |
python-escript | 1 | {simulations,engineering,numericalcomputation} |
quadrule | 1 | {mathematics-dev} |
robot-testing-framework | 1 | {robotics-dev} |
@@ -251,9 +249,10 @@ Last-Update: Sat, 23 Apr 2022 01:42:04 +0000
ompl | 0 | {robotics} |
openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
openturns | 0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} |
+ python-aws-xray-sdk | 0 | {dataacquisition-dev} |
qrupdate | 0 | {mathematics-dev} |
- ros-metapackages | 0 | {robotics-dev} |
ros-metapackages | 0 | {robotics} |
+ ros-metapackages | 0 | {robotics-dev} |
sagemath-database-combinatorial-designs | 0 | {mathematics} |
sagemath-database-conway-polynomials | 0 | {mathematics} |
sagemath-database-elliptic-curves | 0 | {mathematics} |
@@ -266,5 +265,5 @@ Last-Update: Sat, 23 Apr 2022 01:42:04 +0000
triangle | 0 | {physics-dev} |
trilinos | 0 | {physics-dev,mathematics-dev,engineering-dev} |
visp-images | 0 | {robotics-dev} |
-(298 rows)
+(297 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2c308d7f5e0ba844ea942fb944fa2d008fb997fd
--
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