Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
64639dd7 by Andreas Tille at 2022-04-24T13:42:31+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,39 +1,37 @@
-Last-Update: Sun, 24 Apr 2022 01:42:04 +0000
+Last-Update: Sun, 24 Apr 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 180 | {imaging,covid-19} |
- orthanc | 100 | {imaging,covid-19,practice} |
+ dcmtk | 181 | {imaging,covid-19} |
+ orthanc | 99 | {imaging,covid-19,practice} |
orthanc-wsi | 49 | {laboratory,practice,imaging,covid-19,oncology,his} |
- amide | 26 | {imaging} |
- dicomscope | 26 | {imaging} |
+ amide | 25 | {imaging} |
dicom3tools | 25 | {imaging} |
- dcm2niix | 19 | {imaging} |
+ dicomscope | 24 | {imaging} |
+ dcm2niix | 21 | {imaging} |
orthanc-webviewer | 17 | {imaging} |
mrtrix3 | 13 | {imaging} |
dicomnifti | 11 | {imaging} |
gnumed-server | 11 | {practice,covid-19} |
minc-tools | 11 | {imaging} |
+ nipype | 11 | {imaging,imaging-dev} |
invesalius | 10 | {imaging} |
nifti2dicom | 10 | {imaging} |
- nipype | 10 | {imaging,imaging-dev} |
orthanc-dicomweb | 10 | {covid-19,imaging} |
- pixelmed | 10 | {imaging} |
- gdcm | 9 | {imaging,covid-19} |
openslide | 9 | {imaging-dev} |
orthanc-postgresql | 9 | {imaging} |
+ pixelmed | 9 | {imaging} |
treeview | 9 | {bio,bio-phylogeny} |
biojava-live | 8 | {bio-dev} |
+ gdcm | 8 | {imaging,covid-19} |
gdcm | 8 | {imaging-dev} |
mia | 8 | {imaging} |
nifti2dicom | 8 | {imaging} |
orthanc-mysql | 8 | {imaging} |
dicompyler | 7 | {oncology} |
jebl2 | 7 | {bio-dev} |
- libminc | 7 | {imaging-dev} |
librg-utils-perl | 7 | {bio} |
obitools | 7 | {bio} |
- openslide | 7 | {imaging} |
plastimatch | 7 | {imaging} |
runcircos-gui | 7 | {bio} |
canu | 6 | {bio} |
@@ -41,6 +39,7 @@ Last-Update: Sun, 24 Apr 2022 01:42:04 +0000
getdata | 6 | {bio} |
ghmm | 6 | {bio} |
lamarc | 6 | {bio} |
+ libminc | 6 | {imaging-dev} |
libncl | 6 | {bio} |
nifticlib | 6 | {imaging} |
orthanc-gdcm | 6 | {imaging} |
@@ -55,7 +54,7 @@ Last-Update: Sun, 24 Apr 2022 01:42:04 +0000
mauve-aligner | 5 | {bio} |
melting | 5 | {bio,cloud} |
mhap | 5 | {bio-ngs,bio} |
- nifticlib | 5 | {imaging-dev} |
+ openslide | 5 | {imaging} |
phyutility | 5 | {cloud,bio} |
piler | 5 | {bio} |
rtax | 5 | {cloud,bio} |
@@ -74,6 +73,7 @@ Last-Update: Sun, 24 Apr 2022 01:42:04 +0000
hinge | 4 | {bio} |
librdp-taxonomy-tree-java | 4 | {bio-dev} |
metaphlan2 | 4 | {bio} |
+ nifticlib | 4 | {imaging-dev} |
placnet | 4 | {bio} |
plasmidseeker | 4 | {bio} |
proalign | 4 | {bio,bio-phylogeny} |
@@ -114,10 +114,10 @@ Last-Update: Sun, 24 Apr 2022 01:42:04 +0000
kmerresistance | 2 | {bio} |
libbio-mage-utils-perl | 2 | {bio-dev} |
libdivsufsort | 2 | {bio-dev} |
- libgenome | 2 | {bio-dev} |
opencfu | 2 | {laboratory} |
pigx-rnaseq | 2 | {covid-19,bio} |
pique | 2 | {bio} |
+ plasmidid | 2 | {covid-19,bio} |
pplacer | 2 | {covid-19,bio-phylogeny,bio} |
pymia | 2 | {imaging-dev} |
skesa | 2 | {bio} |
@@ -128,10 +128,10 @@ Last-Update: Sun, 24 Apr 2022 01:42:04 +0000
htscodecs | 1 | {covid-19,bio-dev} |
libchado-perl | 1 | {bio-dev} |
libctapimkt | 1 | {practice} |
+ libgenome | 1 | {bio-dev} |
mssstest | 1 | {tools} |
opensurgsim | 1 | {imaging-dev} |
papyrus | 1 | {imaging-dev} |
- plasmidid | 1 | {covid-19,bio} |
python-wdlparse | 1 | {bio-dev} |
seq-gen | 1 | {bio} |
srf | 1 | {bio-dev} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,104 +1,107 @@
-Last-Update: Sun, 24 Apr 2022 01:42:05 +0000
+Last-Update: Sun, 24 Apr 2022 13:42:05 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 3061 | {viewing} |
- sympy | 1686 | {physics,nanoscale-physics} |
- suitesparse | 254 | {mathematics-dev,numericalcomputation} |
- armadillo | 215 | {mathematics-dev} |
- python-pyqtgraph | 147 | {viewing} |
- atlas | 90 | {mathematics-dev} |
- nltk | 69 | {linguistics} |
- arpack | 62 | {mathematics-dev} |
+ gts | 3040 | {viewing} |
+ sympy | 1650 | {physics,nanoscale-physics} |
+ suitesparse | 257 | {mathematics-dev,numericalcomputation} |
+ armadillo | 211 | {mathematics-dev} |
+ python-pyqtgraph | 144 | {viewing} |
+ atlas | 92 | {mathematics-dev} |
+ nltk | 70 | {linguistics} |
+ arpack | 60 | {mathematics-dev} |
cypari2 | 54 | {mathematics-dev} |
- arduino-mk | 51 | {robotics} |
- imview | 50 | {viewing} |
+ imview | 52 | {viewing} |
+ arduino-mk | 49 | {robotics} |
pyzo | 45 | {numericalcomputation} |
- rubiks | 40 | {geometry,mathematics} |
- flintqs | 36 | {mathematics} |
+ rubiks | 41 | {geometry,mathematics} |
+ flintqs | 37 | {mathematics} |
+ eclib | 35 | {mathematics} |
fftw | 34 | {mathematics-dev,meteorology-dev,physics-dev} |
- eclib | 33 | {mathematics} |
sketch | 25 | {typesetting} |
- geg | 22 | {viewing} |
- neuron | 22 | {neuroscience-modeling,highenergy-physics,simulations} |
- feedgnuplot | 21 | {viewing} |
- guidata | 21 | {dataacquisition-dev} |
- guiqwt | 21 | {numericalcomputation,viewing} |
+ geg | 23 | {viewing} |
+ neuron | 23 | {neuroscience-modeling,highenergy-physics,simulations} |
+ feedgnuplot | 22 | {viewing} |
+ guidata | 22 | {dataacquisition-dev} |
+ guiqwt | 22 | {numericalcomputation,viewing} |
+ vitables | 21 | {numericalcomputation} |
gts | 20 | {viewing-dev} |
- vitables | 20 | {numericalcomputation} |
+ bossa | 17 | {devices} |
cernlib | 17 | {highenergy-physics} |
- coinor-symphony | 16 | {mathematics,logic,numericalcomputation} |
+ coinor-symphony | 17 | {mathematics,logic,numericalcomputation} |
+ auto-07p | 16 | {mathematics} |
+ form | 16 | {mathematics} |
gfsview | 16 | {viewing} |
- form | 15 | {mathematics} |
- libmatio | 15 | {mathematics-dev} |
- mathgl | 15 | {viewing} |
+ libmatio | 16 | {mathematics-dev} |
+ mathgl | 16 | {viewing} |
ntl | 15 | {mathematics-dev} |
opencascade | 15 | {simulations} |
+ picosat | 15 | {logic} |
ros-rosconsole | 15 | {robotics-dev} |
ros-ros-environment | 15 | {robotics-dev} |
- bossa | 14 | {devices} |
fftw | 14 | {mathematics-dev,meteorology-dev,physics-dev} |
flann | 14 | {mathematics-dev,engineering-dev} |
neuron | 14 | {highenergy-physics-dev} |
- picosat | 14 | {logic} |
ppl | 14 | {numericalcomputation} |
- matlab-support | 13 | {mathematics,numericalcomputation} |
- apophenia | 12 | {statistics} |
- auto-07p | 12 | {mathematics} |
- debian-science | 12 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
- getdp | 12 | {engineering,simulations,mathematics} |
- rheolef | 12 | {mathematics} |
+ apophenia | 13 | {statistics} |
+ debian-science | 13 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
+ getdp | 13 | {engineering,simulations,mathematics} |
+ rheolef | 13 | {mathematics} |
+ scalapack | 13 | {nanoscale-physics-dev} |
+ uctodata | 13 | {linguistics} |
+ cernlib | 12 | {highenergy-physics-dev} |
+ matlab-support | 12 | {mathematics,numericalcomputation} |
+ opticalraytracer | 12 | {physics} |
+ polylib | 12 | {mathematics} |
tango | 12 | {dataacquisition} |
- uctodata | 12 | {linguistics} |
- cernlib | 11 | {highenergy-physics-dev} |
+ ucto | 12 | {linguistics} |
+ debian-science | 11 | {physics,nanoscale-physics,economics,statistics} |
libm4ri | 11 | {mathematics-dev} |
- opticalraytracer | 11 | {physics} |
- polylib | 11 | {mathematics} |
- ucto | 11 | {linguistics} |
- debian-science | 10 | {physics,nanoscale-physics,economics,statistics} |
- toulbar2 | 10 | {mathematics,numericalcomputation,logic,physics} |
- debian-science | 9 | {nanoscale-physics,economics,physics,machine-learning} |
+ toulbar2 | 11 | {mathematics,numericalcomputation,logic,physics} |
+ debian-science | 10 | {nanoscale-physics,economics,physics,machine-learning} |
+ libcgns | 10 | {engineering} |
+ teem | 10 | {imageanalysis} |
+ code-saturne | 9 | {mathematics-dev,engineering-dev} |
jeuclid | 9 | {viewing,typesetting} |
- libcgns | 9 | {engineering} |
libitpp | 9 | {mathematics-dev,engineering-dev} |
+ lrcalc | 9 | {mathematics} |
+ lxi-tools | 9 | {engineering,dataacquisition} |
pcl | 9 | {robotics-dev} |
- scalapack | 9 | {nanoscale-physics-dev} |
- teem | 9 | {imageanalysis} |
- code-saturne | 8 | {mathematics-dev,engineering-dev} |
+ psurface | 9 | {numericalcomputation} |
+ syrthes | 9 | {engineering} |
debian-science | 8 | {machine-learning,neuroscience-cognitive} |
- lrcalc | 8 | {mathematics} |
- lxi-tools | 8 | {engineering,dataacquisition} |
- psurface | 8 | {numericalcomputation} |
- syrthes | 8 | {engineering} |
+ scram | 8 | {engineering} |
tango | 8 | {dataacquisition} |
astk | 7 | {engineering} |
+ debian-science | 7 | {electrophysiology} |
+ frog | 7 | {linguistics} |
ipe-tools | 7 | {typesetting} |
- libmatheval | 7 | {mathematics} |
- scram | 7 | {engineering} |
+ muparser | 7 | {mathematics-dev} |
+ python-escript | 7 | {numericalcomputation,engineering,simulations} |
cimg | 6 | {imageanalysis-dev} | {x11::library}
cliquer | 6 | {mathematics} |
- debian-science | 6 | {electrophysiology} |
+ dimbl | 6 | {linguistics} |
dune-istl | 6 | {mathematics-dev} |
dune-uggrid | 6 | {mathematics-dev} |
dxsamples | 6 | {nanoscale-physics} |
- frog | 6 | {linguistics} |
+ etsf-io | 6 | {nanoscale-physics,physics} |
+ irstlm | 6 | {linguistics} |
+ libgetdata | 6 | {dataacquisition} |
+ libmatheval | 6 | {mathematics} |
libvigraimpex | 6 | {imageanalysis-dev,machine-learning} |
- muparser | 6 | {mathematics-dev} |
+ mbt | 6 | {linguistics} |
opencascade | 6 | {simulations} |
- python-escript | 6 | {numericalcomputation,engineering,simulations} |
alberta | 5 | {engineering-dev} |
cernlib | 5 | {highenergy-physics} |
- debian-science | 5 | {psychophysics} |
debian-science | 5 | {tools} |
- dimbl | 5 | {linguistics} |
- etsf-io | 5 | {nanoscale-physics,physics} |
- irstlm | 5 | {linguistics} |
- libgetdata | 5 | {dataacquisition} |
- mbt | 5 | {linguistics} |
+ debian-science | 5 | {psychophysics} |
+ mbtserver | 5 | {linguistics} |
morse-simulator | 5 | {robotics} |
openmx | 5 | {physics,nanoscale-physics} |
sac2mseed | 5 | {geography} |
simbody | 5 | {robotics-dev} |
+ timbl | 5 | {linguistics} |
+ timblserver | 5 | {linguistics} |
apertium-streamparser | 4 | {linguistics} |
cbflib | 4 | {nanoscale-physics} |
clhep | 4 | {highenergy-physics-dev} |
@@ -108,18 +111,14 @@ Last-Update: Sun, 24 Apr 2022 01:42:05 +0000
debian-science | 4 | {electrophysiology} |
dxflib | 4 | {engineering-dev} |
eclib | 4 | {mathematics-dev} |
- libgtkdatabox | 4 | {engineering-dev,viewing-dev} |
libm4rie | 4 | {mathematics-dev} |
libmatheval | 4 | {mathematics-dev} |
libzn-poly | 4 | {mathematics-dev} |
looptools | 4 | {highenergy-physics} |
- mbtserver | 4 | {linguistics} |
neuron | 4 | {highenergy-physics-dev} |
qd | 4 | {mathematics-dev} |
tango | 4 | {dataacquisition-dev} |
taurus | 4 | {dataacquisition} |
- timbl | 4 | {linguistics} |
- timblserver | 4 | {linguistics} |
x13as | 4 | {economics} |
cernlib | 3 | {highenergy-physics} |
cliquer | 3 | {mathematics-dev} |
@@ -142,15 +141,15 @@ Last-Update: Sun, 24 Apr 2022 01:42:05 +0000
urdfdom-headers | 3 | {robotics-dev} |
apophenia | 2 | {statistics} |
cernlib | 2 | {highenergy-physics} |
- debian-science | 2 | {physics} |
debian-science | 2 | {neuroscience-cognitive} |
+ debian-science | 2 | {physics} |
debian-science | 2 | {economics} |
fastjet | 2 | {highenergy-physics-dev} |
harp | 2 | {meteorology} |
libccp4 | 2 | {nanoscale-physics-dev} |
+ libgtkdatabox | 2 | {engineering-dev,viewing-dev} |
libhomfly | 2 | {mathematics-dev} |
liblxi | 2 | {dataacquisition-dev,engineering-dev} |
- libvigraimpex | 2 | {imageanalysis-dev,machine-learning} |
ompl | 2 | {robotics-dev} |
openctm | 2 | {physics-dev} |
openstereogram | 2 | {tools} |
@@ -171,11 +170,10 @@ Last-Update: Sun, 24 Apr 2022 01:42:05 +0000
frogdata | 1 | {linguistics} |
gemmlowp | 1 | {mathematics-dev} |
itsol | 1 | {mathematics-dev} |
- jhdf | 1 | {engineering} |
- jhdf | 1 | {engineering-dev} |
libgetdata | 1 | {dataacquisition-dev} |
liblbfgs | 1 | {mathematics-dev} |
liborigin2 | 1 | {viewing-dev} |
+ libvigraimpex | 1 | {imageanalysis-dev,machine-learning} |
metis-edf | 1 | {numericalcomputation,engineering} |
neartree | 1 | {numericalcomputation,mathematics-dev} |
openigtlink | 1 | {robotics-dev} |
@@ -225,9 +223,9 @@ Last-Update: Sun, 24 Apr 2022 01:42:05 +0000
calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
calculix-ccx-test | 0 | {simulations,engineering,numericalcomputation} |
cbflib | 0 | {nanoscale-physics-dev} |
- cernlib | 0 | {highenergy-physics-dev} |
- cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {highenergy-physics,physics} |
+ cernlib | 0 | {highenergy-physics} |
+ cernlib | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
code-saturne | 0 | {engineering} |
@@ -236,6 +234,8 @@ Last-Update: Sun, 24 Apr 2022 01:42:05 +0000
etsf-io | 0 | {nanoscale-physics-dev} |
fastjet | 0 | {highenergy-physics-dev} |
glpk-java | 0 | {mathematics-dev} |
+ jhdf | 0 | {engineering-dev} |
+ jhdf | 0 | {engineering} |
libdogleg | 0 | {mathematics-dev} |
libfolia | 0 | {linguistics} |
libgetdata | 0 | {dataacquisition-dev} |
@@ -247,8 +247,8 @@ Last-Update: Sun, 24 Apr 2022 01:42:05 +0000
mclibs | 0 | {highenergy-physics} |
metis-edf | 0 | {engineering-dev} |
ompl | 0 | {robotics} |
- openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
openturns | 0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} |
+ openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
python-aws-xray-sdk | 0 | {dataacquisition-dev} |
qrupdate | 0 | {mathematics-dev} |
ros-metapackages | 0 | {robotics} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/64639dd7cee49a553d72828d257a2bfc86e215b0
--
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