Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
f7ea7e76 by Andreas Tille at 2022-04-25T13:42:30+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,37 +1,38 @@
-Last-Update: Mon, 25 Apr 2022 01:42:03 +0000
+Last-Update: Mon, 25 Apr 2022 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 181 | {imaging,covid-19} |
- orthanc | 99 | {imaging,covid-19,practice} |
- orthanc-wsi | 49 | {laboratory,practice,imaging,covid-19,oncology,his} |
+ dcmtk | 182 | {imaging,covid-19} |
+ orthanc | 101 | {imaging,covid-19,practice} |
+ orthanc-wsi | 51 | {laboratory,practice,imaging,covid-19,oncology,his} |
amide | 25 | {imaging} |
dicom3tools | 25 | {imaging} |
- dicomscope | 24 | {imaging} |
+ dicomscope | 23 | {imaging} |
dcm2niix | 21 | {imaging} |
- orthanc-webviewer | 17 | {imaging} |
+ orthanc-webviewer | 19 | {imaging} |
mrtrix3 | 13 | {imaging} |
+ orthanc-dicomweb | 12 | {covid-19,imaging} |
dicomnifti | 11 | {imaging} |
gnumed-server | 11 | {practice,covid-19} |
minc-tools | 11 | {imaging} |
nipype | 11 | {imaging,imaging-dev} |
+ orthanc-postgresql | 11 | {imaging} |
invesalius | 10 | {imaging} |
nifti2dicom | 10 | {imaging} |
- orthanc-dicomweb | 10 | {covid-19,imaging} |
- openslide | 9 | {imaging-dev} |
- orthanc-postgresql | 9 | {imaging} |
+ orthanc-mysql | 10 | {imaging} |
+ gdcm | 9 | {imaging-dev} |
pixelmed | 9 | {imaging} |
treeview | 9 | {bio,bio-phylogeny} |
biojava-live | 8 | {bio-dev} |
gdcm | 8 | {imaging,covid-19} |
- gdcm | 8 | {imaging-dev} |
mia | 8 | {imaging} |
nifti2dicom | 8 | {imaging} |
- orthanc-mysql | 8 | {imaging} |
+ openslide | 8 | {imaging-dev} |
dicompyler | 7 | {oncology} |
jebl2 | 7 | {bio-dev} |
librg-utils-perl | 7 | {bio} |
obitools | 7 | {bio} |
+ orthanc-gdcm | 7 | {imaging} |
plastimatch | 7 | {imaging} |
runcircos-gui | 7 | {bio} |
canu | 6 | {bio} |
@@ -39,18 +40,18 @@ Last-Update: Mon, 25 Apr 2022 01:42:03 +0000
getdata | 6 | {bio} |
ghmm | 6 | {bio} |
lamarc | 6 | {bio} |
- libminc | 6 | {imaging-dev} |
libncl | 6 | {bio} |
nifticlib | 6 | {imaging} |
- orthanc-gdcm | 6 | {imaging} |
oscar | 6 | {data,practice,tools} |
saint | 6 | {bio} |
+ salmon | 6 | {bio,covid-19} |
stacks | 6 | {bio} |
bio-tradis | 5 | {bio-dev,bio} |
bitseq | 5 | {bio} |
cmtk | 5 | {imaging} |
embassy-domainatrix | 5 | {bio,cloud} |
ipig | 5 | {bio} |
+ libminc | 5 | {imaging-dev} |
mauve-aligner | 5 | {bio} |
melting | 5 | {bio,cloud} |
mhap | 5 | {bio-ngs,bio} |
@@ -58,7 +59,6 @@ Last-Update: Mon, 25 Apr 2022 01:42:03 +0000
phyutility | 5 | {cloud,bio} |
piler | 5 | {bio} |
rtax | 5 | {cloud,bio} |
- salmon | 5 | {bio,covid-19} |
staden | 5 | {bio} |
adun.app | 4 | {bio} |
beast-mcmc | 4 | {bio,bio-phylogeny} |
@@ -73,7 +73,6 @@ Last-Update: Mon, 25 Apr 2022 01:42:03 +0000
hinge | 4 | {bio} |
librdp-taxonomy-tree-java | 4 | {bio-dev} |
metaphlan2 | 4 | {bio} |
- nifticlib | 4 | {imaging-dev} |
placnet | 4 | {bio} |
plasmidseeker | 4 | {bio} |
proalign | 4 | {bio,bio-phylogeny} |
@@ -90,6 +89,7 @@ Last-Update: Mon, 25 Apr 2022 01:42:03 +0000
libpal-java | 3 | {bio-dev} |
libsbml | 3 | {bio-dev} |
microbegps | 3 | {bio} |
+ nifticlib | 3 | {imaging-dev} |
orthanc-python | 3 | {covid-19} |
pscan-chip | 3 | {bio} |
qcumber | 3 | {bio} |
@@ -130,7 +130,6 @@ Last-Update: Mon, 25 Apr 2022 01:42:03 +0000
libctapimkt | 1 | {practice} |
libgenome | 1 | {bio-dev} |
mssstest | 1 | {tools} |
- opensurgsim | 1 | {imaging-dev} |
papyrus | 1 | {imaging-dev} |
python-wdlparse | 1 | {bio-dev} |
seq-gen | 1 | {bio} |
@@ -179,6 +178,7 @@ Last-Update: Mon, 25 Apr 2022 01:42:03 +0000
milib | 0 | {bio-dev,covid-19} |
ncbi-vdb | 0 | {bio-dev} |
nifticlib | 0 | {imaging-dev} |
+ opensurgsim | 0 | {imaging-dev} |
orthanc-imagej | 0 | {imaging} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
@@ -186,7 +186,6 @@ Last-Update: Mon, 25 Apr 2022 01:42:03 +0000
python-seqcluster | 0 | {bio} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
- sight | 0 | {imaging-dev} |
simpleitk | 0 | {imaging-dev} |
smrtanalysis | 0 | {covid-19,bio} |
tipp | 0 | {covid-19,bio} |
@@ -197,5 +196,6 @@ Last-Update: Mon, 25 Apr 2022 01:42:03 +0000
malt | -1 | {bio} |
megan-ce | -1 | {bio} |
rockhopper | -1 | {bio} |
+ sight | -1 | {imaging-dev} |
(225 rows)
=====================================
debian-science-tests.txt
=====================================
@@ -1,90 +1,90 @@
-Last-Update: Mon, 25 Apr 2022 01:42:04 +0000
+Last-Update: Mon, 25 Apr 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 3040 | {viewing} |
- sympy | 1650 | {physics,nanoscale-physics} |
- suitesparse | 257 | {mathematics-dev,numericalcomputation} |
- armadillo | 211 | {mathematics-dev} |
- python-pyqtgraph | 144 | {viewing} |
- atlas | 92 | {mathematics-dev} |
- nltk | 70 | {linguistics} |
- arpack | 60 | {mathematics-dev} |
- cypari2 | 54 | {mathematics-dev} |
- imview | 52 | {viewing} |
- arduino-mk | 49 | {robotics} |
- pyzo | 45 | {numericalcomputation} |
- rubiks | 41 | {geometry,mathematics} |
+ gts | 3027 | {viewing} |
+ sympy | 1643 | {physics,nanoscale-physics} |
+ suitesparse | 255 | {mathematics-dev,numericalcomputation} |
+ armadillo | 208 | {mathematics-dev} |
+ python-pyqtgraph | 140 | {viewing} |
+ atlas | 93 | {mathematics-dev} |
+ nltk | 73 | {linguistics} |
+ arpack | 57 | {mathematics-dev} |
+ cypari2 | 55 | {mathematics-dev} |
+ imview | 51 | {viewing} |
+ arduino-mk | 47 | {robotics} |
+ pyzo | 43 | {numericalcomputation} |
+ rubiks | 42 | {geometry,mathematics} |
flintqs | 37 | {mathematics} |
eclib | 35 | {mathematics} |
fftw | 34 | {mathematics-dev,meteorology-dev,physics-dev} |
- sketch | 25 | {typesetting} |
+ sketch | 24 | {typesetting} |
geg | 23 | {viewing} |
- neuron | 23 | {neuroscience-modeling,highenergy-physics,simulations} |
feedgnuplot | 22 | {viewing} |
guidata | 22 | {dataacquisition-dev} |
guiqwt | 22 | {numericalcomputation,viewing} |
+ neuron | 22 | {neuroscience-modeling,highenergy-physics,simulations} |
vitables | 21 | {numericalcomputation} |
gts | 20 | {viewing-dev} |
- bossa | 17 | {devices} |
- cernlib | 17 | {highenergy-physics} |
- coinor-symphony | 17 | {mathematics,logic,numericalcomputation} |
+ bossa | 18 | {devices} |
+ cernlib | 18 | {highenergy-physics} |
+ coinor-symphony | 18 | {mathematics,logic,numericalcomputation} |
+ gfsview | 18 | {viewing} |
auto-07p | 16 | {mathematics} |
form | 16 | {mathematics} |
- gfsview | 16 | {viewing} |
- libmatio | 16 | {mathematics-dev} |
mathgl | 16 | {viewing} |
+ opencascade | 16 | {simulations} |
+ fftw | 15 | {mathematics-dev,meteorology-dev,physics-dev} |
+ libmatio | 15 | {mathematics-dev} |
ntl | 15 | {mathematics-dev} |
- opencascade | 15 | {simulations} |
picosat | 15 | {logic} |
- ros-rosconsole | 15 | {robotics-dev} |
ros-ros-environment | 15 | {robotics-dev} |
- fftw | 14 | {mathematics-dev,meteorology-dev,physics-dev} |
- flann | 14 | {mathematics-dev,engineering-dev} |
- neuron | 14 | {highenergy-physics-dev} |
ppl | 14 | {numericalcomputation} |
apophenia | 13 | {statistics} |
+ cernlib | 13 | {highenergy-physics-dev} |
debian-science | 13 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
getdp | 13 | {engineering,simulations,mathematics} |
+ neuron | 13 | {highenergy-physics-dev} |
rheolef | 13 | {mathematics} |
scalapack | 13 | {nanoscale-physics-dev} |
uctodata | 13 | {linguistics} |
- cernlib | 12 | {highenergy-physics-dev} |
- matlab-support | 12 | {mathematics,numericalcomputation} |
+ flann | 12 | {mathematics-dev,engineering-dev} |
opticalraytracer | 12 | {physics} |
polylib | 12 | {mathematics} |
+ ros-rosconsole | 12 | {robotics-dev} |
tango | 12 | {dataacquisition} |
+ toulbar2 | 12 | {mathematics,numericalcomputation,logic,physics} |
ucto | 12 | {linguistics} |
debian-science | 11 | {physics,nanoscale-physics,economics,statistics} |
+ debian-science | 11 | {nanoscale-physics,economics,physics,machine-learning} |
libm4ri | 11 | {mathematics-dev} |
- toulbar2 | 11 | {mathematics,numericalcomputation,logic,physics} |
- debian-science | 10 | {nanoscale-physics,economics,physics,machine-learning} |
+ matlab-support | 11 | {mathematics,numericalcomputation} |
+ jeuclid | 10 | {viewing,typesetting} |
libcgns | 10 | {engineering} |
+ psurface | 10 | {numericalcomputation} |
teem | 10 | {imageanalysis} |
- code-saturne | 9 | {mathematics-dev,engineering-dev} |
- jeuclid | 9 | {viewing,typesetting} |
- libitpp | 9 | {mathematics-dev,engineering-dev} |
lrcalc | 9 | {mathematics} |
lxi-tools | 9 | {engineering,dataacquisition} |
- pcl | 9 | {robotics-dev} |
- psurface | 9 | {numericalcomputation} |
syrthes | 9 | {engineering} |
+ tango | 9 | {dataacquisition} |
+ code-saturne | 8 | {mathematics-dev,engineering-dev} |
debian-science | 8 | {machine-learning,neuroscience-cognitive} |
+ libitpp | 8 | {mathematics-dev,engineering-dev} |
+ pcl | 8 | {robotics-dev} |
+ python-escript | 8 | {numericalcomputation,engineering,simulations} |
scram | 8 | {engineering} |
- tango | 8 | {dataacquisition} |
astk | 7 | {engineering} |
debian-science | 7 | {electrophysiology} |
+ etsf-io | 7 | {nanoscale-physics,physics} |
frog | 7 | {linguistics} |
ipe-tools | 7 | {typesetting} |
muparser | 7 | {mathematics-dev} |
- python-escript | 7 | {numericalcomputation,engineering,simulations} |
cimg | 6 | {imageanalysis-dev} | {x11::library}
cliquer | 6 | {mathematics} |
dimbl | 6 | {linguistics} |
dune-istl | 6 | {mathematics-dev} |
dune-uggrid | 6 | {mathematics-dev} |
dxsamples | 6 | {nanoscale-physics} |
- etsf-io | 6 | {nanoscale-physics,physics} |
irstlm | 6 | {linguistics} |
libgetdata | 6 | {dataacquisition} |
libmatheval | 6 | {mathematics} |
@@ -99,24 +99,24 @@ Last-Update: Mon, 25 Apr 2022 01:42:04 +0000
morse-simulator | 5 | {robotics} |
openmx | 5 | {physics,nanoscale-physics} |
sac2mseed | 5 | {geography} |
- simbody | 5 | {robotics-dev} |
timbl | 5 | {linguistics} |
timblserver | 5 | {linguistics} |
apertium-streamparser | 4 | {linguistics} |
cbflib | 4 | {nanoscale-physics} |
clhep | 4 | {highenergy-physics-dev} |
- coda | 4 | {meteorology} |
coda | 4 | {meteorology-dev} |
+ coda | 4 | {meteorology} |
coinmp | 4 | {numericalcomputation,logic,mathematics-dev} |
debian-science | 4 | {electrophysiology} |
- dxflib | 4 | {engineering-dev} |
eclib | 4 | {mathematics-dev} |
libm4rie | 4 | {mathematics-dev} |
libmatheval | 4 | {mathematics-dev} |
libzn-poly | 4 | {mathematics-dev} |
looptools | 4 | {highenergy-physics} |
+ mrmpi | 4 | {tools} |
neuron | 4 | {highenergy-physics-dev} |
qd | 4 | {mathematics-dev} |
+ simbody | 4 | {robotics-dev} |
tango | 4 | {dataacquisition-dev} |
taurus | 4 | {dataacquisition} |
x13as | 4 | {economics} |
@@ -124,6 +124,7 @@ Last-Update: Mon, 25 Apr 2022 01:42:04 +0000
cliquer | 3 | {mathematics-dev} |
debian-science | 3 | {nanoscale-physics-dev} |
dune-localfunctions | 3 | {mathematics-dev} |
+ dxflib | 3 | {engineering-dev} |
gf2x | 3 | {mathematics-dev} |
hpcc | 3 | {numericalcomputation,distributedcomputing} |
iml | 3 | {mathematics-dev} |
@@ -133,7 +134,6 @@ Last-Update: Mon, 25 Apr 2022 01:42:04 +0000
libgetdata | 3 | {dataacquisition-dev} |
looptools | 3 | {highenergy-physics-dev} |
lrcalc | 3 | {mathematics-dev} |
- mrmpi | 3 | {tools} |
newmat | 3 | {mathematics-dev} |
qwtplot3d | 3 | {viewing-dev} |
sardana | 3 | {dataacquisition} |
@@ -141,9 +141,9 @@ Last-Update: Mon, 25 Apr 2022 01:42:04 +0000
urdfdom-headers | 3 | {robotics-dev} |
apophenia | 2 | {statistics} |
cernlib | 2 | {highenergy-physics} |
- debian-science | 2 | {neuroscience-cognitive} |
- debian-science | 2 | {physics} |
debian-science | 2 | {economics} |
+ debian-science | 2 | {physics} |
+ debian-science | 2 | {neuroscience-cognitive} |
fastjet | 2 | {highenergy-physics-dev} |
harp | 2 | {meteorology} |
libccp4 | 2 | {nanoscale-physics-dev} |
@@ -173,19 +173,15 @@ Last-Update: Mon, 25 Apr 2022 01:42:04 +0000
libgetdata | 1 | {dataacquisition-dev} |
liblbfgs | 1 | {mathematics-dev} |
liborigin2 | 1 | {viewing-dev} |
- libvigraimpex | 1 | {imageanalysis-dev,machine-learning} |
metis-edf | 1 | {numericalcomputation,engineering} |
neartree | 1 | {numericalcomputation,mathematics-dev} |
openigtlink | 1 | {robotics-dev} |
openturns | 1 | {engineering-dev,meteorology-dev,mathematics-dev} |
- psurface | 1 | {numericalcomputation} |
pycollada | 1 | {engineering-dev} |
pynac | 1 | {mathematics-dev} |
python-escript | 1 | {simulations,engineering,numericalcomputation} |
quadrule | 1 | {mathematics-dev} |
- robot-testing-framework | 1 | {robotics-dev} |
ros-opencv-apps | 1 | {robotics} |
- siscone | 1 | {highenergy-physics-dev} |
tamuanova | 1 | {statistics} |
tango | 1 | {dataacquisition} |
vlfeat | 1 | {imageanalysis-dev} |
@@ -223,9 +219,9 @@ Last-Update: Mon, 25 Apr 2022 01:42:04 +0000
calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
calculix-ccx-test | 0 | {simulations,engineering,numericalcomputation} |
cbflib | 0 | {nanoscale-physics-dev} |
- cernlib | 0 | {highenergy-physics,physics} |
- cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {highenergy-physics-dev} |
+ cernlib | 0 | {highenergy-physics} |
+ cernlib | 0 | {highenergy-physics,physics} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
code-saturne | 0 | {engineering} |
@@ -242,17 +238,20 @@ Last-Update: Mon, 25 Apr 2022 01:42:04 +0000
libquantum | 0 | {numericalcomputation} |
librsl | 0 | {meteorology-dev} |
libsdsl | 0 | {dataacquisition-dev} |
+ libvigraimpex | 0 | {imageanalysis-dev,machine-learning} |
libxsmm | 0 | {mathematics-dev} |
looptools | 0 | {highenergy-physics-dev} |
mclibs | 0 | {highenergy-physics} |
metis-edf | 0 | {engineering-dev} |
ompl | 0 | {robotics} |
- openturns | 0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} |
openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
+ openturns | 0 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} |
+ psurface | 0 | {numericalcomputation} |
python-aws-xray-sdk | 0 | {dataacquisition-dev} |
qrupdate | 0 | {mathematics-dev} |
- ros-metapackages | 0 | {robotics} |
+ robot-testing-framework | 0 | {robotics-dev} |
ros-metapackages | 0 | {robotics-dev} |
+ ros-metapackages | 0 | {robotics} |
sagemath-database-combinatorial-designs | 0 | {mathematics} |
sagemath-database-conway-polynomials | 0 | {mathematics} |
sagemath-database-elliptic-curves | 0 | {mathematics} |
@@ -265,5 +264,5 @@ Last-Update: Mon, 25 Apr 2022 01:42:04 +0000
triangle | 0 | {physics-dev} |
trilinos | 0 | {physics-dev,mathematics-dev,engineering-dev} |
visp-images | 0 | {robotics-dev} |
-(297 rows)
+(296 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f7ea7e76995944c7fcf90090b77c8fa1025c1793
--
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