[med-svn] [Git][med-team/spades][master] 3 commits: debian/NEWS: less verbose news item.

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / spades


Commits:
e6705608 by Étienne Mollier at 2022-08-01T21:10:18+02:00
debian/NEWS: less verbose news item.

Gbp-Dch: ignore

- - - - -
155e281a by Étienne Mollier at 2022-08-01T21:12:58+02:00
ready to upload to unstable.

- - - - -
1de58481 by Étienne Mollier at 2022-08-01T22:05:16+02:00
d/NEWS: make message both clearer and shorter.

Gbp-Dch: ignore

- - - - -


2 changed files:

- debian/NEWS
- debian/changelog


Changes:

=====================================
debian/NEWS
=====================================
@@ -1,20 +1,12 @@
-spades (3.15.5+dfsg-1) UNRELEASED; urgency=medium
+spades (3.15.5+dfsg-1) unstable; urgency=medium
 
-  Since version 3.15, the truspades command is deprecated.  According to
-  upstream[1], the technology behind truspades is a thing of the past:
-
-  > Thanks for the report. truSPAdes is not maintained anymore for many reasons
-  > (the technology is dead, etc.), so these issues will likely be fixed in
-  > radical way when truSPAdes will be deprecated and removed
+  Since version 3.15, the truspades command is deprecated upstream and
+  will be removed in an upcoming spades version[1].  Please be aware
+  that the truspades version still provided by Debian Med may not work
+  properly anymore: it has been noticed that it failed its self-test
+  since version 3.15.5.  Other spades commands are not affected and are
+  working as usual.
 
   [1]: https://github.com/ablab/spades/issues/560#issuecomment-675915841
 
-  It is quite possible that the truspades version still provided by Debian Med
-  is not working well anymore.  At least it has been noticed that it failed its
-  self-test since version 3.15.5.  The test fails by not outputting the
-  assemble scaffolds file then supposed to be processed by the `bwa` program in
-  the sample workflow.
-
-  The command truspades will probably not make it beyond spades version 3.16.
-
- -- Étienne Mollier <emollier at debian.org>  Sun, 24 Jul 2022 16:05:54 +0200
+ -- Étienne Mollier <emollier at debian.org>  Mon, 01 Aug 2022 21:11:03 +0200


=====================================
debian/changelog
=====================================
@@ -1,6 +1,5 @@
-spades (3.15.5+dfsg-1) UNRELEASED; urgency=medium
+spades (3.15.5+dfsg-1) unstable; urgency=medium
 
- TODO: NEWS: drafted entry about truspades deprecation needs polishing.
   * New upstream version 3.15.5+dfsg
   * d/patches/:
     + fix-privacy-breaches.patch: update badges list.
@@ -13,8 +12,9 @@ spades (3.15.5+dfsg-1) UNRELEASED; urgency=medium
     Also, the truspades command is deprecated, so don't make it's self-test
     failure critical.
   * d/salsa-ci.yml: disable run for i386 architecture.
+  * d/NEWS: forward deprecation of truspades with notice it may not work well.
 
- -- Étienne Mollier <emollier at debian.org>  Sun, 24 Jul 2022 20:01:02 +0200
+ -- Étienne Mollier <emollier at debian.org>  Mon, 01 Aug 2022 21:11:59 +0200
 
 spades (3.15.4+dfsg-3) unstable; urgency=medium
 



View it on GitLab: https://salsa.debian.org/med-team/spades/-/compare/970cebf4869284b508023d369d59e715607e14fb...1de58481d8bfcccbd24e042d8f7081bf9a27ae19

-- 
View it on GitLab: https://salsa.debian.org/med-team/spades/-/compare/970cebf4869284b508023d369d59e715607e14fb...1de58481d8bfcccbd24e042d8f7081bf9a27ae19
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20220801/c703ddf0/attachment-0001.htm>