[med-svn] [Git][med-team/augur][upstream] New upstream version 17.0.0

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / augur


Commits:
7d94878a by Andreas Tille at 2022-08-12T14:39:31+02:00
New upstream version 17.0.0
- - - - -


30 changed files:

- + .github/pull_request_template.md
- .github/workflows/ci.yaml
- CHANGES.md
- README.md
- augur/__init__.py
- augur/__version__.py
- augur/align.py
- augur/ancestral.py
- + augur/argparse_.py
- augur/clades.py
- augur/distance.py
- augur/export.py
- augur/export_v1.py
- augur/export_v2.py
- augur/filter.py
- augur/frequencies.py
- augur/import.py → augur/import_/__init__.py
- augur/import_beast.py → augur/import_/beast.py
- augur/index.py
- augur/lbi.py
- augur/mask.py
- + augur/measurements/__init__.py
- + augur/measurements/concat.py
- augur/measurements.py → augur/measurements/export.py
- augur/parse.py
- augur/reconstruct_sequences.py
- augur/refine.py
- augur/sequence_traits.py
- augur/titers.py
- augur/traits.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/augur/-/commit/7d94878a1919186dd4b66a2f0d315e5d7e784cb5

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