[med-svn] [Git][med-team/python-wdlparse][master] 5 commits: Add autopkgtests
Mohd Bilal (@rmb)
gitlab at salsa.debian.org
Sun Aug 28 18:01:35 BST 2022
Mohd Bilal pushed to branch master at Debian Med / python-wdlparse
Commits:
571e715b by Mohammed Bilal at 2022-08-28T16:58:09+00:00
Add autopkgtests
- - - - -
08be94e7 by Mohammed Bilal at 2022-08-28T16:59:04+00:00
routine-update: Packaging update
- - - - -
c56bc594 by Mohammed Bilal at 2022-08-28T16:59:05+00:00
routine-update: Standards-Version: 4.6.1
- - - - -
8be21632 by Mohammed Bilal at 2022-08-28T16:59:44+00:00
routine-update: Ready to upload to unstable
- - - - -
e881219c by Mohammed Bilal at 2022-08-28T17:00:49+00:00
Update changelog
- - - - -
7 changed files:
- debian/changelog
- debian/control
- + debian/tests/control
- + debian/tests/run-unit-test
- + debian/tests/sample_test.py
- wdlparse.egg-info/PKG-INFO
- wdlparse.egg-info/SOURCES.txt
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,11 @@
+python-wdlparse (0.1.0-3) UNRELEASED; urgency=medium
+
+ * Team upload.
+ * Add autopkgtests
+ * routine-update: Standards-Version: 4.6.1
+
+ -- Mohammed Bilal <mdbilal at disroot.org> Sun, 28 Aug 2022 17:00:01 +0000
+
python-wdlparse (0.1.0-2) unstable; urgency=medium
* Source-only upload.
=====================================
debian/control
=====================================
@@ -8,7 +8,7 @@ Build-Depends: debhelper-compat (= 13),
python3-all,
python3-setuptools,
python3-antlr4
-Standards-Version: 4.5.1
+Standards-Version: 4.6.1
Vcs-Browser: https://salsa.debian.org/med-team/python-wdlparse
Vcs-Git: https://salsa.debian.org/med-team/python-wdlparse.git
Homepage: https://github.com/DataBiosphere/wdl-parsers
=====================================
debian/tests/control
=====================================
@@ -0,0 +1,3 @@
+Tests: run-unit-test
+Depends: @, python3-all
+Restrictions: allow-stderr
=====================================
debian/tests/run-unit-test
=====================================
@@ -0,0 +1,26 @@
+#!/bin/bash
+set -e
+
+pkg=python-wdlparse
+CUR_DIR=`pwd`
+
+export LC_ALL=C.UTF-8
+if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
+ AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
+ trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
+fi
+
+cp -a ${CUR_DIR}/debian/tests/sample_test.py "${AUTOPKGTEST_TMP}"
+
+cd "${AUTOPKGTEST_TMP}"
+
+echo -e "Running Tests"
+
+for py in $(py3versions -s 2> /dev/null)
+do
+ echo "Testing with $py in $(pwd):"
+ $py sample_test.py
+
+done
+
+echo -e "PASS"
=====================================
debian/tests/sample_test.py
=====================================
@@ -0,0 +1,22 @@
+from wdlparse.draft2 import wdl_parser
+
+wdl_code = """
+task my_task {
+ File file
+ command {
+ ./my_binary --input=${file} > results
+ }
+ output {
+ File results = "results"
+ }
+}
+
+workflow my_wf {
+ call my_task
+}
+"""
+# Parse source code into abstract syntax tree
+ast = wdl_parser.parse(wdl_code).ast()
+# Print out abstract syntax tree
+print(ast.dumps(indent=2))
+
=====================================
wdlparse.egg-info/PKG-INFO
=====================================
@@ -6,6 +6,8 @@ Home-page: https://github.com/DataBiosphere/wdl-parsers
Author: William Gao
Author-email: wlgao at ucsc.edu
License: Apache License v2.0
-Description: UNKNOWN
Platform: UNKNOWN
Provides-Extra: dev
+
+UNKNOWN
+
=====================================
wdlparse.egg-info/SOURCES.txt
=====================================
@@ -1,5 +1,18 @@
+PKG-INFO
README.md
+setup.cfg
setup.py
+debian/changelog
+debian/control
+debian/copyright
+debian/rules
+debian/salsa-ci.yml
+debian/watch
+debian/source/format
+debian/tests/control
+debian/tests/run-unit-test
+debian/tests/sample_test.py
+debian/upstream/metadata
wdlparse/__init__.py
wdlparse.egg-info/PKG-INFO
wdlparse.egg-info/SOURCES.txt
View it on GitLab: https://salsa.debian.org/med-team/python-wdlparse/-/compare/ad731e57d662f98d47cefa59563ffffacb8d8c44...e881219cdb06d04f96833ebf3f2af56955bdc8e1
--
View it on GitLab: https://salsa.debian.org/med-team/python-wdlparse/-/compare/ad731e57d662f98d47cefa59563ffffacb8d8c44...e881219cdb06d04f96833ebf3f2af56955bdc8e1
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