[med-svn] [Git][med-team/vdjtools][master] 28 commits: Setting the Section of the -java package to non-free/java
Pierre Gruet (@pgt)
gitlab at salsa.debian.org
Sun Dec 4 06:52:46 GMT 2022
Pierre Gruet pushed to branch master at Debian Med / vdjtools
Commits:
2b60e259 by Pierre Gruet at 2022-11-27T14:26:54+01:00
Setting the Section of the -java package to non-free/java
- - - - -
e05539a3 by Pierre Gruet at 2022-11-27T14:27:37+01:00
Adding a Comment in d/copyright to explain why the package is non-free, although it is quite straightforward to guess
- - - - -
3f636328 by Pierre Gruet at 2022-11-27T15:05:55+01:00
Removing uninformative d/README.source file
- - - - -
88257391 by Pierre Gruet at 2022-11-27T15:36:04+01:00
Adding a header to the patch
- - - - -
0ddcb0c4 by Pierre Gruet at 2022-11-27T15:40:39+01:00
Using javahelper for the build
- - - - -
e973ce0d by Pierre Gruet at 2022-11-27T15:40:49+01:00
Setting the classpath of the built jar
- - - - -
82144259 by Pierre Gruet at 2022-11-27T15:41:07+01:00
Revising the list of (build-)dependencies
- - - - -
05c67026 by Pierre Gruet at 2022-11-27T15:41:33+01:00
Setting /bin/sh in the shebang of our provided shell script
- - - - -
168e9ca3 by Pierre Gruet at 2022-11-27T15:42:45+01:00
Updating changelog
- - - - -
5fcfe2d8 by Pierre Gruet at 2022-11-27T15:45:40+01:00
Removing d/vdjtools.dirs
- - - - -
2fc49c53 by Pierre Gruet at 2022-11-27T15:46:46+01:00
Removing useless files for old Maven packaging
- - - - -
874bf58c by Pierre Gruet at 2022-11-27T15:47:33+01:00
Removing files from the old libvdjtools-java-doc package
- - - - -
53d75d12 by Pierre Gruet at 2022-12-03T14:54:01+01:00
Repacking to remove the gradle directory in the source
- - - - -
b0272d34 by Pierre Gruet at 2022-12-03T15:22:08+01:00
Repacking without the gradlew script
- - - - -
bb9888b7 by Pierre Gruet at 2022-12-03T15:23:00+01:00
New upstream version 1.2.1+git20190311+repack
- - - - -
7fc5dd3c by Pierre Gruet at 2022-12-03T15:23:18+01:00
Update upstream source from tag 'upstream/1.2.1+git20190311+repack'
Update to upstream version '1.2.1+git20190311+repack'
with Debian dir 825713dd61577dcd6a2f89b12c222b16ebbc303d
- - - - -
ae994c2f by Pierre Gruet at 2022-12-03T15:26:49+01:00
Updating changelog
- - - - -
e35504e1 by Pierre Gruet at 2022-12-03T21:25:44+01:00
Removing unneeded d/maven.publishedRules file
- - - - -
939d05de by Pierre Gruet at 2022-12-03T21:26:27+01:00
Addins missing backslash in d/watch
- - - - -
78041bdc by Pierre Gruet at 2022-12-03T21:26:41+01:00
Simplifying d/maven.rules
- - - - -
999ca7ed by Pierre Gruet at 2022-12-03T21:27:03+01:00
Updating the list of missing libraries in the patch
- - - - -
6528420e by Pierre Gruet at 2022-12-03T21:28:02+01:00
Using maven_repo_helper to provide Maven artifacts
- - - - -
1fd32607 by Pierre Gruet at 2022-12-03T21:28:57+01:00
Removing the flatDir directory in build.gradle to build with a proper classpath
- - - - -
0e941cf3 by Pierre Gruet at 2022-12-03T22:14:15+01:00
Installing the built jar through maven_repo_helper
- - - - -
dba1d98b by Pierre Gruet at 2022-12-03T23:17:14+01:00
Enriching the classpath
- - - - -
288ace79 by Pierre Gruet at 2022-12-03T23:18:08+01:00
Preventing gradle from shipping a fat jar with bundled dependencies
- - - - -
ee27c941 by Pierre Gruet at 2022-12-03T23:21:05+01:00
Updating changelog
- - - - -
f05ca6ae by Pierre Gruet at 2022-12-04T07:17:44+01:00
Upload to unstable
- - - - -
24 changed files:
- − debian/README.source
- debian/bin/vdjtools
- debian/changelog
- debian/control
- debian/copyright
- − debian/libvdjtools-java-doc.doc-base.api
- − debian/libvdjtools-java-doc.install
- + debian/libvdjtools-java.classpath
- − debian/libvdjtools-java.install
- debian/libvdjtools-java.poms
- − debian/maven.cleanIgnoreRules
- − debian/maven.properties
- − debian/maven.publishedRules
- debian/maven.rules
- debian/patches/addMissingLibraries.patch
- + debian/patches/build.patch
- debian/patches/series
- debian/rules
- − debian/vdjtools.dirs
- debian/watch
- − gradle/wrapper/gradle-wrapper.jar
- − gradle/wrapper/gradle-wrapper.properties
- − gradlew
- − gradlew.bat
Changes:
=====================================
debian/README.source deleted
=====================================
@@ -1,9 +0,0 @@
-Information about vdjtools
---------------------------
-
-This package was debianized using the mh_make command
-from the maven-debian-helper package.
-
-The build system uses Maven but prevents it from downloading
-anything from the Internet, making the build compliant with
-the Debian policy.
=====================================
debian/bin/vdjtools
=====================================
@@ -1,4 +1,4 @@
-#!/bin/dash
+#!/bin/sh
JARFILE=/usr/share/java/vdjtools.jar
=====================================
debian/changelog
=====================================
@@ -1,11 +1,28 @@
-vdjtools (1.2.1+git20190311-7) UNRELEASED; urgency=medium
+vdjtools (1.2.1+git20190311+repack-1) unstable; urgency=medium
* Team upload.
+ * New upstream version 1.2.1+git20190311+repack:
+ - Repacking to remove the gradle directory and the gradlew script
+ * Using javahelper for the build
+ * Setting the classpath of the built jar
+ * Revising the list of (build-)dependencies
+ * Setting the Section of the -java package to non-free/java
+ * Adding a Comment in d/copyright to explain why the package lies in non-free
+ * Simplifying d/maven.rules
+ * Removing unneeded files from the debian/ directory
+ * Adding a header to the patch
+ * Setting /bin/sh in the shebang of our provided shell script
+ * Updating the list of dependencies in the patch
+ * Using maven_repo_helper to provide Maven artifacts
+ * Removing the flatDir directory in build.gradle to build with a proper
+ classpath
+ * Preventing gradle from shipping a fat jar with bundled dependencies
+
+ [ Andreas Tille ]
* Fix watch file
* Standards-Version: 4.6.1 (routine-update)
- TODO: autopkgtest failure https://salsa.debian.org/med-team/vdjtools/-/jobs/3581757
- -- Andreas Tille <tille at debian.org> Sun, 27 Nov 2022 06:39:52 +0100
+ -- Pierre Gruet <pgt at debian.org> Sun, 04 Dec 2022 07:17:24 +0100
vdjtools (1.2.1+git20190311-6) unstable; urgency=medium
=====================================
debian/control
=====================================
@@ -7,18 +7,14 @@ XS-Autobuild: no
Priority: optional
Build-Depends: debhelper-compat (= 13),
default-jdk,
- gradle,
gradle-debian-helper,
+ javahelper,
maven-repo-helper
Build-Depends-Indep: groovy,
- libcommons-cli-java,
- libcommons-io-java,
libcommons-lang3-java,
libgpars-groovy-java,
- libmaven-shade-plugin-java,
libmilib-java,
libcommons-math3-java,
- libtrove3-java,
junit4
Standards-Version: 4.6.1
Vcs-Browser: https://salsa.debian.org/med-team/vdjtools
@@ -28,8 +24,9 @@ Rules-Requires-Root: no
Package: libvdjtools-java
Architecture: all
-Depends: ${misc:Depends}
-Suggests: ${maven:OptionalDepends}
+Section: non-free/java
+Depends: ${java:Depends},
+ ${misc:Depends}
Description: Java library of vdjtools
The VDJtools are interacting with the R statistics environment
to characterize the constitution of the immune repertoire
@@ -39,9 +36,8 @@ Description: Java library of vdjtools
Package: vdjtools
Architecture: all
Depends: ${misc:Depends},
- ${java:Depends},
libvdjtools-java,
- default-jre | java-runtime
+ default-jre
Recommends: r-cran-ape,
r-cran-ggplot2,
r-cran-gplots,
=====================================
debian/copyright
=====================================
@@ -1,11 +1,18 @@
Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: VDJtools
Source: https://github.com/mikessh/vdjtools/releases
+Files-Excluded: gradle
+ gradlew
+ gradlew.bat
+Comment: excluding the gradle jar from the source, we don't need it for the
+ build. Same for the gradlew script.
Files: *
Copyright: 2015-2019 Bolotin Dmitry Chudakov <Dmitrychudakovdm at mail.ru, chudakovdm at gmail.com>,
Shugay Mikhail
License: non-free
+Comment: The possibility of using the package is restricted to educational,
+ research and non-profit purposes by non-profit institutions only.
Files: debian/*
Copyright: 2018-2020, Steffen Moeller <moeller at debian.org>
=====================================
debian/libvdjtools-java-doc.doc-base.api deleted
=====================================
@@ -1,10 +0,0 @@
-Document: libvdjtools-java
-Title: API Javadoc for vdjtools
-Author: vdjtools developers
-Abstract: This is the API Javadoc provided for the
- libvdjtools-java library.
-Section: Programming
-
-Format: HTML
-Index: /usr/share/doc/libvdjtools-java/api/index.html
-Files: /usr/share/doc/libvdjtools-java/api/*
=====================================
debian/libvdjtools-java-doc.install deleted
=====================================
@@ -1,2 +0,0 @@
-target/apidocs/* usr/share/doc/libvdjtools-java/api
-
=====================================
debian/libvdjtools-java.classpath
=====================================
@@ -0,0 +1 @@
+usr/share/java/vdjtools.jar /usr/share/java/commons-cli.jar /usr/share/java/commons-lang3.jar /usr/share/java/commons-math3.jar /usr/share/java/groovy.jar /usr/share/java/milib.jar
=====================================
debian/libvdjtools-java.install deleted
=====================================
@@ -1 +0,0 @@
-./build/libs/vdjtools-1.2.1.jar usr/share/java
=====================================
debian/libvdjtools-java.poms
=====================================
@@ -25,4 +25,4 @@
# --site-xml=<location>: Optional, the location for site.xml if it needs to be installed.
# Empty by default. [mh_install]
#
-build/debian/vdjtools.pom --has-package-version
+build/debian/vdjtools.pom --has-package-version --artifact=build/libs/vdjtools-*.jar --java-lib
=====================================
debian/maven.cleanIgnoreRules deleted
=====================================
@@ -1 +0,0 @@
-
=====================================
debian/maven.properties deleted
=====================================
@@ -1,4 +0,0 @@
-# Include here properties to pass to Maven during the build.
-# For example:
-# maven.test.skip=true
-# project.build.sourceEncoding=UTF-8
=====================================
debian/maven.publishedRules deleted
=====================================
@@ -1,3 +0,0 @@
-
-com.antigenomics vdjtools jar * * *
-com.antigenomics vdjtools jar s/.*/debian/ * *
=====================================
debian/maven.rules
=====================================
@@ -1,9 +1,2 @@
-com.antigenomics vdjtools jar * * *
-com.antigenomics vdjtools jar s/.*/debian/ * *
-com.milaboratory milib jar * * *
junit junit jar s/4\..*/4.x/ * *
-org.apache.maven.plugins maven-surefire-plugin * * * *
-org.codehaus.mojo buildnumber-maven-plugin * * * *
-org.mockito mockito-all * * * *
-org.sonatype.plugins nexus-staging-maven-plugin * * * *
=====================================
debian/patches/addMissingLibraries.patch
=====================================
@@ -1,8 +1,11 @@
-diff --git a/build.gradle b/build.gradle
-index 67fb062..c1747ac 100644
+Description: changing Maven coordinates of dependencies for the build
+Author: tony mancill <tmancill at debian.org>
+Forwarded: not-needed
+Last-Update: 2022-11-27
+
--- a/build.gradle
+++ b/build.gradle
-@@ -42,8 +42,13 @@ sourceSets {
+@@ -42,8 +42,14 @@
dependencies {
compile 'org.codehaus.groovy:groovy-all:2.5.2'
compile 'org.codehaus.gpars:gpars:1.2.1'
@@ -13,6 +16,7 @@ index 67fb062..c1747ac 100644
+ compile 'net.sf.trove4j:trove4j:3.0.3'
compile 'org.apache.commons:commons-lang3:3.4'
+ compile 'org.apache.commons:commons-math3:3.6.1'
++ compile 'cc.redberry:pipe:1.0.0-alpha0'
+
+ testCompile 'junit:junit:4.12'
+
=====================================
debian/patches/build.patch
=====================================
@@ -0,0 +1,30 @@
+Description: pacthing the build.gradle file so that not all jars are in the
+ build classpath by default. Instead we should specify the needed ones only.
+ Also we prevent gradle from shipping a fat jar with all dependencies bundled
+ inside.
+Author: Pierre Gruet <pgt at debian.org>
+Forwarded: not-needed
+Last-Update: 2022-12-03
+
+--- a/build.gradle
++++ b/build.gradle
+@@ -11,8 +11,6 @@
+
+ repositories {
+ mavenCentral()
+- maven { url 'https://jitpack.io' }
+- flatDir { dirs '/usr/share/java' }
+ }
+
+ jar {
+@@ -22,10 +20,6 @@
+ manifest {
+ attributes("Main-Class": "$mainClassName", "Implementation-Version": version)
+ }
+-
+- from {
+- configurations.compile.collect { it.isDirectory() ? it : zipTree(it) }
+- }
+ }
+
+ sourceSets {
=====================================
debian/patches/series
=====================================
@@ -1 +1,2 @@
addMissingLibraries.patch
+build.patch
=====================================
debian/rules
=====================================
@@ -3,7 +3,7 @@
include /usr/share/dpkg/default.mk
%:
- dh $@ --buildsystem=gradle
+ dh $@ --buildsystem=gradle --with javahelper,maven_repo_helper
override_dh_auto_clean:
dh_auto_clean
=====================================
debian/vdjtools.dirs deleted
=====================================
@@ -1 +0,0 @@
-usr/bin
=====================================
debian/watch
=====================================
@@ -1,4 +1,5 @@
version=4
-opts="filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE at -$1.tar.gz%" \
+opts="filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE at -$1.tar.gz%, \
+ repack, repacksuffix=+repack, compression=xz, dversionmangle=s/\+repack\d*//" \
https://github.com/mikessh/vdjtools/tags .*/v?([0-9.]*[0-9]).tar.gz
=====================================
gradle/wrapper/gradle-wrapper.jar deleted
=====================================
Binary files a/gradle/wrapper/gradle-wrapper.jar and /dev/null differ
=====================================
gradle/wrapper/gradle-wrapper.properties deleted
=====================================
@@ -1,5 +0,0 @@
-distributionBase=GRADLE_USER_HOME
-distributionPath=wrapper/dists
-distributionUrl=https\://services.gradle.org/distributions/gradle-4.10.2-bin.zip
-zipStoreBase=GRADLE_USER_HOME
-zipStorePath=wrapper/dists
=====================================
gradlew deleted
=====================================
@@ -1,172 +0,0 @@
-#!/usr/bin/env sh
-
-##############################################################################
-##
-## Gradle start up script for UN*X
-##
-##############################################################################
-
-# Attempt to set APP_HOME
-# Resolve links: $0 may be a link
-PRG="$0"
-# Need this for relative symlinks.
-while [ -h "$PRG" ] ; do
- ls=`ls -ld "$PRG"`
- link=`expr "$ls" : '.*-> \(.*\)$'`
- if expr "$link" : '/.*' > /dev/null; then
- PRG="$link"
- else
- PRG=`dirname "$PRG"`"/$link"
- fi
-done
-SAVED="`pwd`"
-cd "`dirname \"$PRG\"`/" >/dev/null
-APP_HOME="`pwd -P`"
-cd "$SAVED" >/dev/null
-
-APP_NAME="Gradle"
-APP_BASE_NAME=`basename "$0"`
-
-# Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
-DEFAULT_JVM_OPTS=""
-
-# Use the maximum available, or set MAX_FD != -1 to use that value.
-MAX_FD="maximum"
-
-warn () {
- echo "$*"
-}
-
-die () {
- echo
- echo "$*"
- echo
- exit 1
-}
-
-# OS specific support (must be 'true' or 'false').
-cygwin=false
-msys=false
-darwin=false
-nonstop=false
-case "`uname`" in
- CYGWIN* )
- cygwin=true
- ;;
- Darwin* )
- darwin=true
- ;;
- MINGW* )
- msys=true
- ;;
- NONSTOP* )
- nonstop=true
- ;;
-esac
-
-CLASSPATH=$APP_HOME/gradle/wrapper/gradle-wrapper.jar
-
-# Determine the Java command to use to start the JVM.
-if [ -n "$JAVA_HOME" ] ; then
- if [ -x "$JAVA_HOME/jre/sh/java" ] ; then
- # IBM's JDK on AIX uses strange locations for the executables
- JAVACMD="$JAVA_HOME/jre/sh/java"
- else
- JAVACMD="$JAVA_HOME/bin/java"
- fi
- if [ ! -x "$JAVACMD" ] ; then
- die "ERROR: JAVA_HOME is set to an invalid directory: $JAVA_HOME
-
-Please set the JAVA_HOME variable in your environment to match the
-location of your Java installation."
- fi
-else
- JAVACMD="java"
- which java >/dev/null 2>&1 || die "ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
-
-Please set the JAVA_HOME variable in your environment to match the
-location of your Java installation."
-fi
-
-# Increase the maximum file descriptors if we can.
-if [ "$cygwin" = "false" -a "$darwin" = "false" -a "$nonstop" = "false" ] ; then
- MAX_FD_LIMIT=`ulimit -H -n`
- if [ $? -eq 0 ] ; then
- if [ "$MAX_FD" = "maximum" -o "$MAX_FD" = "max" ] ; then
- MAX_FD="$MAX_FD_LIMIT"
- fi
- ulimit -n $MAX_FD
- if [ $? -ne 0 ] ; then
- warn "Could not set maximum file descriptor limit: $MAX_FD"
- fi
- else
- warn "Could not query maximum file descriptor limit: $MAX_FD_LIMIT"
- fi
-fi
-
-# For Darwin, add options to specify how the application appears in the dock
-if $darwin; then
- GRADLE_OPTS="$GRADLE_OPTS \"-Xdock:name=$APP_NAME\" \"-Xdock:icon=$APP_HOME/media/gradle.icns\""
-fi
-
-# For Cygwin, switch paths to Windows format before running java
-if $cygwin ; then
- APP_HOME=`cygpath --path --mixed "$APP_HOME"`
- CLASSPATH=`cygpath --path --mixed "$CLASSPATH"`
- JAVACMD=`cygpath --unix "$JAVACMD"`
-
- # We build the pattern for arguments to be converted via cygpath
- ROOTDIRSRAW=`find -L / -maxdepth 1 -mindepth 1 -type d 2>/dev/null`
- SEP=""
- for dir in $ROOTDIRSRAW ; do
- ROOTDIRS="$ROOTDIRS$SEP$dir"
- SEP="|"
- done
- OURCYGPATTERN="(^($ROOTDIRS))"
- # Add a user-defined pattern to the cygpath arguments
- if [ "$GRADLE_CYGPATTERN" != "" ] ; then
- OURCYGPATTERN="$OURCYGPATTERN|($GRADLE_CYGPATTERN)"
- fi
- # Now convert the arguments - kludge to limit ourselves to /bin/sh
- i=0
- for arg in "$@" ; do
- CHECK=`echo "$arg"|egrep -c "$OURCYGPATTERN" -`
- CHECK2=`echo "$arg"|egrep -c "^-"` ### Determine if an option
-
- if [ $CHECK -ne 0 ] && [ $CHECK2 -eq 0 ] ; then ### Added a condition
- eval `echo args$i`=`cygpath --path --ignore --mixed "$arg"`
- else
- eval `echo args$i`="\"$arg\""
- fi
- i=$((i+1))
- done
- case $i in
- (0) set -- ;;
- (1) set -- "$args0" ;;
- (2) set -- "$args0" "$args1" ;;
- (3) set -- "$args0" "$args1" "$args2" ;;
- (4) set -- "$args0" "$args1" "$args2" "$args3" ;;
- (5) set -- "$args0" "$args1" "$args2" "$args3" "$args4" ;;
- (6) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" ;;
- (7) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" ;;
- (8) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" ;;
- (9) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" "$args8" ;;
- esac
-fi
-
-# Escape application args
-save () {
- for i do printf %s\\n "$i" | sed "s/'/'\\\\''/g;1s/^/'/;\$s/\$/' \\\\/" ; done
- echo " "
-}
-APP_ARGS=$(save "$@")
-
-# Collect all arguments for the java command, following the shell quoting and substitution rules
-eval set -- $DEFAULT_JVM_OPTS $JAVA_OPTS $GRADLE_OPTS "\"-Dorg.gradle.appname=$APP_BASE_NAME\"" -classpath "\"$CLASSPATH\"" org.gradle.wrapper.GradleWrapperMain "$APP_ARGS"
-
-# by default we should be in the correct project dir, but when run from Finder on Mac, the cwd is wrong
-if [ "$(uname)" = "Darwin" ] && [ "$HOME" = "$PWD" ]; then
- cd "$(dirname "$0")"
-fi
-
-exec "$JAVACMD" "$@"
=====================================
gradlew.bat deleted
=====================================
@@ -1,84 +0,0 @@
- at if "%DEBUG%" == "" @echo off
- at rem ##########################################################################
- at rem
- at rem Gradle startup script for Windows
- at rem
- at rem ##########################################################################
-
- at rem Set local scope for the variables with windows NT shell
-if "%OS%"=="Windows_NT" setlocal
-
-set DIRNAME=%~dp0
-if "%DIRNAME%" == "" set DIRNAME=.
-set APP_BASE_NAME=%~n0
-set APP_HOME=%DIRNAME%
-
- at rem Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
-set DEFAULT_JVM_OPTS=
-
- at rem Find java.exe
-if defined JAVA_HOME goto findJavaFromJavaHome
-
-set JAVA_EXE=java.exe
-%JAVA_EXE% -version >NUL 2>&1
-if "%ERRORLEVEL%" == "0" goto init
-
-echo.
-echo ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
-echo.
-echo Please set the JAVA_HOME variable in your environment to match the
-echo location of your Java installation.
-
-goto fail
-
-:findJavaFromJavaHome
-set JAVA_HOME=%JAVA_HOME:"=%
-set JAVA_EXE=%JAVA_HOME%/bin/java.exe
-
-if exist "%JAVA_EXE%" goto init
-
-echo.
-echo ERROR: JAVA_HOME is set to an invalid directory: %JAVA_HOME%
-echo.
-echo Please set the JAVA_HOME variable in your environment to match the
-echo location of your Java installation.
-
-goto fail
-
-:init
- at rem Get command-line arguments, handling Windows variants
-
-if not "%OS%" == "Windows_NT" goto win9xME_args
-
-:win9xME_args
- at rem Slurp the command line arguments.
-set CMD_LINE_ARGS=
-set _SKIP=2
-
-:win9xME_args_slurp
-if "x%~1" == "x" goto execute
-
-set CMD_LINE_ARGS=%*
-
-:execute
- at rem Setup the command line
-
-set CLASSPATH=%APP_HOME%\gradle\wrapper\gradle-wrapper.jar
-
- at rem Execute Gradle
-"%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %CMD_LINE_ARGS%
-
-:end
- at rem End local scope for the variables with windows NT shell
-if "%ERRORLEVEL%"=="0" goto mainEnd
-
-:fail
-rem Set variable GRADLE_EXIT_CONSOLE if you need the _script_ return code instead of
-rem the _cmd.exe /c_ return code!
-if not "" == "%GRADLE_EXIT_CONSOLE%" exit 1
-exit /b 1
-
-:mainEnd
-if "%OS%"=="Windows_NT" endlocal
-
-:omega
View it on GitLab: https://salsa.debian.org/med-team/vdjtools/-/compare/394c4964bd7a1748263d9d0532703327592c358e...f05ca6aed24d7ecafafe450727e0273d6f7fd11f
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View it on GitLab: https://salsa.debian.org/med-team/vdjtools/-/compare/394c4964bd7a1748263d9d0532703327592c358e...f05ca6aed24d7ecafafe450727e0273d6f7fd11f
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