[med-svn] [Git][med-team/vg][master] 19 commits: routine-update: New upstream version

[Michael R. Crusoe (@crusoe)]

Michael R. Crusoe pushed to branch master at Debian Med / vg


Commits:
9b151b56 by Michael R. Crusoe at 2022-08-11T15:56:12+02:00
routine-update: New upstream version

- - - - -
485f66cb by Michael R. Crusoe at 2022-08-11T15:56:17+02:00
New upstream version 1.42.0+ds
- - - - -
98b87eef by Michael R. Crusoe at 2022-08-11T15:58:24+02:00
Update upstream source from tag 'upstream/1.42.0+ds'

Update to upstream version '1.42.0+ds'
with Debian dir adc8649ff2c33afae3cf8937a65e9356dc44c8da
- - - - -
083af4ae by Michael R. Crusoe at 2022-08-11T15:58:24+02:00
routine-update: Standards-Version: 4.6.1

- - - - -
1d1f49a0 by Michael R. Crusoe at 2022-08-11T15:58:36+02:00
Remove duplicate line from changelog.

Changes-By: lintian-brush

- - - - -
c37aef71 by Michael R. Crusoe at 2022-10-19T10:52:42+02:00
routine-update: New upstream version

- - - - -
a41c0124 by Michael R. Crusoe at 2022-10-19T10:52:46+02:00
New upstream version 1.43.0+ds
- - - - -
7ae9d10d by Michael R. Crusoe at 2022-10-19T10:55:10+02:00
Update upstream source from tag 'upstream/1.43.0+ds'

Update to upstream version '1.43.0+ds'
with Debian dir c71b2dba680d0d442cef73b2c8400d924c7f8c7f
- - - - -
83cf8001 by Michael R. Crusoe at 2022-10-19T10:55:23+02:00
Remove duplicate line from changelog.

Changes-By: lintian-brush

- - - - -
cb41281e by Michael R. Crusoe at 2022-10-19T11:34:15+02:00
refresh patches again

- - - - -
82dfd14e by Michael R. Crusoe at 2022-10-19T11:35:07+02:00
cleanup changelog

- - - - -
90d0b3dc by Michael R. Crusoe at 2022-12-02T11:06:06+01:00
Keep vendored copy of libssw until vg updates to a regular release

- - - - -
fbebde78 by Michael R. Crusoe at 2022-12-02T11:09:44+01:00
routine-update: New upstream version

- - - - -
b9ae1f14 by Michael R. Crusoe at 2022-12-02T11:09:50+01:00
New upstream version 1.44.0+ds
- - - - -
0a9d039d by Michael R. Crusoe at 2022-12-02T11:12:42+01:00
Update upstream source from tag 'upstream/1.44.0+ds'

Update to upstream version '1.44.0+ds'
with Debian dir 11888849466ed4079b14fc2c59b26f92ca29cdf3
- - - - -
f1ba22ec by Michael R. Crusoe at 2022-12-02T11:12:56+01:00
Remove duplicate line from changelog.

Changes-By: lintian-brush

- - - - -
19c43fa6 by Michael R. Crusoe at 2022-12-02T12:40:15+01:00
Refreshed patches, moved some of the crossbuild fixes into earlier patches to reduce churn.

- - - - -
4007a6c4 by Michael R. Crusoe at 2022-12-02T12:48:50+01:00
d/patches/series: skip the ssw patches to use the code copy for now.

- - - - -
139e0e3b by Michael R. Crusoe at 2022-12-05T10:55:03+01:00
d/control: new build-dep: libzstd-dev

- - - - -


30 changed files:

- .github/workflows/testmac.yml
- .gitlab-ci.yml
- .gitmodules
- Brewfile
- Dockerfile
- Makefile
- README.md
- debian/changelog
- debian/control
- debian/copyright
- debian/patches/better_clean
- debian/patches/crossbuild
- debian/patches/fix-handlegraph
- debian/patches/hardening_flags
- debian/patches/libVCFH_unneeded
- debian/patches/no_need_for_snappy
- debian/patches/no_pg
- debian/patches/no_rpath
- debian/patches/parallize_better
- debian/patches/python3
- debian/patches/series
- debian/patches/simde
- debian/patches/static
- debian/patches/use_packaged_elfutils
- debian/patches/use_packaged_fastahack
- debian/patches/use_packaged_fermi-lite
- debian/patches/use_packaged_htslib
- debian/patches/use_packaged_jemalloc
- debian/patches/use_packaged_libbackward-cpp
- debian/patches/use_packaged_libdeflate


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/vg/-/compare/f35bf129c24aeab2c206b70231a852bce294dd64...139e0e3bb1e8fd5c2cbde5e372d6dde274ee5100

-- 
View it on GitLab: https://salsa.debian.org/med-team/vg/-/compare/f35bf129c24aeab2c206b70231a852bce294dd64...139e0e3bb1e8fd5c2cbde5e372d6dde274ee5100
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20221205/3a5178e8/attachment-0001.htm>