[med-svn] [Git][med-team/toil][master] 7 commits: Fix watch file

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / toil


Commits:
9631f696 by Andreas Tille at 2022-12-06T15:57:42+01:00
Fix watch file

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8d5c635d by Andreas Tille at 2022-12-06T15:57:54+01:00
New upstream version 5.7.1
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c306fdc6 by Andreas Tille at 2022-12-06T15:57:54+01:00
routine-update: New upstream version

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924093e3 by Andreas Tille at 2022-12-06T15:58:03+01:00
Update upstream source from tag 'upstream/5.7.1'

Update to upstream version '5.7.1'
with Debian dir d0e257adfb38622ad4b0cf73c661c7fc488976ab
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a4a8a8d6 by Andreas Tille at 2022-12-06T15:58:14+01:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse..

Changes-By: lintian-brush

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d3db6c9e by Andreas Tille at 2022-12-06T16:01:51+01:00
Refresh patches

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9e0c2571 by Andreas Tille at 2022-12-06T16:08:16+01:00
TODO: NameError: name 'Object' is not defined

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30 changed files:

- .gitlab-ci.yml
- Makefile
- attic/README.md
- contrib/admin/cleanup_aws_resources.py
- contrib/admin/mypy-with-ignore.py
- + contrib/hooks/lib.py
- + contrib/hooks/mypy-after-commit.py
- + contrib/hooks/mypy-before-push.py
- + contrib/pod-murder-bot/murder.yaml
- + contrib/pod-murder-bot/podKiller.sh
- contrib/typeshed/dill/_dill.pyi
- dashboard/grafana/toil_dashboard.json
- dashboard/mtail/Dockerfile
- debian/changelog
- debian/patches/atomic_copy_as_alternative.patch
- debian/patches/exit_code_exception
- debian/patches/no_galaxy_lib
- debian/patches/python3_in_doc.patch
- debian/patches/ship_tests
- debian/upstream/metadata
- debian/watch
- docker/Dockerfile.py
- + docker/singularity-sources.tsv
- docs/appendices/environment_vars.rst
- docs/contributing/contributing.rst
- docs/developingWorkflows/toilAPIBatchsystem.rst
- docs/running/cliOptions.rst
- docs/running/cloud/clusterUtils.rst
- − docs/running/server/Dockerfile
- docs/running/server/docker-compose.yml


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/toil/-/compare/d4029d825eedfc1a98ea71d7410598aa48ba3d23...9e0c25719d2b45939e8c35f97e7bd866e2d1c633

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View it on GitLab: https://salsa.debian.org/med-team/toil/-/compare/d4029d825eedfc1a98ea71d7410598aa48ba3d23...9e0c25719d2b45939e8c35f97e7bd866e2d1c633
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