[med-svn] [Git][med-team/seaview][master] 4 commits: Unfortunately the upload was rejected due to wrong MD5sum of the tarball. ...

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / seaview


Commits:
17c6c58e by Andreas Tille at 2022-12-18T08:20:42+01:00
Unfortunately the upload was rejected due to wrong MD5sum of the tarball.  Just using the chance to refresh other things in the package

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a1e3b11b by Andreas Tille at 2022-12-18T08:21:53+01:00
routine-update: Standards-Version: 4.6.2

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53230bf0 by Andreas Tille at 2022-12-18T08:23:58+01:00
Revert change in upstream source

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406d0982 by Andreas Tille at 2022-12-18T08:25:17+01:00
Upload on behalf of Charles Plessy <plessy at debian.org>

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3 changed files:

- align.cxx
- debian/changelog
- debian/control


Changes:

=====================================
align.cxx
=====================================
@@ -1012,7 +1012,7 @@ void init_msa_algos(void)
   set_res_value("msa_name_1", "clustalo"); 
   set_res_value("msa_args_1", "-v -i %f.pir -o %f.out --outfmt=fasta");
   set_res_value("msa_name_2", "muscle"); 
-  set_res_value("msa_args_2", "-align %f.pir -output %f.out");
+  set_res_value("msa_args_2", "-in %f.pir -out %f.out");
   if (count < 2) {
     set_res_value("msa_algo_count", "2");
     set_res_value("alignment", "0"); /* clustal-omega is default starting msa method */


=====================================
debian/changelog
=====================================
@@ -1,8 +1,12 @@
 seaview (1:5.0.5-2) unstable; urgency=medium
 
+  [ Charles Plessy ]
   * Patch for command-line arguments of MUSCLE 5.
 
- -- Charles Plessy <plessy at debian.org>  Thu, 15 Dec 2022 15:09:37 +0900
+  [ Andreas Tille ]
+  * Standards-Version: 4.6.2 (routine-update)
+
+ -- Charles Plessy <plessy at debian.org>  Sun, 18 Dec 2022 08:24:57 +0100
 
 seaview (1:5.0.5-1) unstable; urgency=medium
 


=====================================
debian/control
=====================================
@@ -11,7 +11,7 @@ Build-Depends: debhelper-compat (= 13),
                libxext-dev,
                libxinerama-dev,
                zlib1g-dev
-Standards-Version: 4.6.0
+Standards-Version: 4.6.2
 Vcs-Browser: https://salsa.debian.org/med-team/seaview
 Vcs-Git: https://salsa.debian.org/med-team/seaview.git
 Homepage: https://doua.prabi.fr/software/seaview



View it on GitLab: https://salsa.debian.org/med-team/seaview/-/compare/15722bf490e433a39daa78de150020df02380b95...406d0982fc26db9b214722253882dd188c9fb946

-- 
View it on GitLab: https://salsa.debian.org/med-team/seaview/-/compare/15722bf490e433a39daa78de150020df02380b95...406d0982fc26db9b214722253882dd188c9fb946
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