[med-svn] [Git][med-team/pairtools][master] 2 commits: Add patch to fix FTBFS with numpy 1.24 (Closes: #1027232)

[Nilesh Patra (@nilesh)]

Nilesh Patra pushed to branch master at Debian Med / pairtools


Commits:
03bb0209 by Nilesh Patra at 2022-12-30T19:35:55+05:30
Add patch to fix FTBFS with numpy 1.24 (Closes: #1027232)

- - - - -
13246875 by Nilesh Patra at 2022-12-30T19:36:03+05:30
Bump Standards-Version to 4.6.2 (no changes needed)

- - - - -


3 changed files:

- debian/control
- + debian/patches/numpy-1.24.patch
- debian/patches/series


Changes:

=====================================
debian/control
=====================================
@@ -16,7 +16,7 @@ Build-Depends: debhelper-compat (= 13),
                python3-sphinx-click,
                libhts-dev,
                python3-yaml <!nocheck>
-Standards-Version: 4.6.1
+Standards-Version: 4.6.2
 Homepage: https://github.com/mirnylab/pairtools
 Vcs-Browser: https://salsa.debian.org/med-team/pairtools
 Vcs-Git: https://salsa.debian.org/med-team/pairtools.git


=====================================
debian/patches/numpy-1.24.patch
=====================================
@@ -0,0 +1,14 @@
+Description: Fix build/tests with numpy 1.24
+Author: Nilesh Patra <nilesh at debian.org>
+Last-Update: 2022-12-30
+--- a/pairtools/lib/stats.py
++++ b/pairtools/lib/stats.py
+@@ -58,7 +58,7 @@
+                 ** np.arange(
+                     min_log10_dist, max_log10_dist + 0.001, log10_dist_bin_step
+                 )
+-            ).astype(np.int),
++            ).astype(np.int64),
+         ]
+ 
+         # establish structure of an empty _stat:


=====================================
debian/patches/series
=====================================
@@ -1,3 +1,4 @@
 makefile
 fix-spelling
 tests-to-python3
+numpy-1.24.patch



View it on GitLab: https://salsa.debian.org/med-team/pairtools/-/compare/f38c0bfa18b3af964b3753a76f0f0129c0b26869...13246875a0fc3671b4d04e019c1afc5cde255de0

-- 
View it on GitLab: https://salsa.debian.org/med-team/pairtools/-/compare/f38c0bfa18b3af964b3753a76f0f0129c0b26869...13246875a0fc3671b4d04e019c1afc5cde255de0
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