Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
46a1473d by Andreas Tille at 2022-02-02T13:42:19+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,57 +1,55 @@
-Last-Update: Wed, 02 Feb 2022 01:42:03 +0000
+Last-Update: Wed, 02 Feb 2022 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 188 | {covid-19,imaging} |
- orthanc | 101 | {imaging,covid-19,practice} |
+ dcmtk | 189 | {covid-19,imaging} |
+ orthanc | 102 | {imaging,covid-19,practice} |
orthanc-wsi | 55 | {practice,laboratory,covid-19,imaging,his,oncology} |
- htsjdk | 36 | {bio-dev} |
- dicomscope | 27 | {imaging} |
- amide | 26 | {imaging} |
+ htsjdk | 34 | {bio-dev} |
+ amide | 27 | {imaging} |
dcm2niix | 26 | {imaging} |
+ dicomscope | 26 | {imaging} |
dicom3tools | 25 | {imaging} |
orthanc-webviewer | 18 | {imaging} |
- ngs-sdk | 17 | {bio-dev} |
+ ngs-sdk | 16 | {bio-dev} |
gnumed-server | 15 | {practice,covid-19} |
- gdcm | 14 | {covid-19,imaging} |
- invesalius | 13 | {imaging} |
- adun.app | 11 | {bio} |
- gdcm | 11 | {imaging-dev} |
+ gdcm | 12 | {covid-19,imaging} |
+ invesalius | 12 | {imaging} |
lagan | 11 | {bio} |
+ minc-tools | 11 | {imaging} |
mrtrix3 | 11 | {imaging} |
- minc-tools | 10 | {imaging} |
+ adun.app | 10 | {bio} |
+ gdcm | 10 | {imaging-dev} |
+ dicomnifti | 9 | {imaging} |
nifticlib | 9 | {imaging-dev} |
+ nifticlib | 9 | {imaging} |
openslide | 9 | {imaging-dev} |
orthanc-dicomweb | 9 | {imaging,covid-19} |
- dicomnifti | 8 | {imaging} |
libminc | 8 | {imaging-dev} |
- librg-utils-perl | 8 | {bio} |
- mia | 8 | {imaging} |
ngs-sdk | 8 | {bio-dev} |
- nifticlib | 8 | {imaging} |
- openslide | 8 | {imaging} |
orthanc-postgresql | 8 | {imaging} |
pixelmed | 8 | {imaging} |
- biojava-live | 7 | {bio-dev} |
- libncl | 7 | {bio} |
+ mia | 7 | {imaging} |
ngs-sdk | 7 | {bio-dev} |
nifti2dicom | 7 | {imaging} |
+ openslide | 7 | {imaging} |
plastimatch | 7 | {imaging} |
+ biojava-live | 6 | {bio-dev} |
+ libncl | 6 | {bio} |
nifti2dicom | 6 | {imaging} |
+ orthanc-mysql | 6 | {imaging} |
salmon | 6 | {bio,covid-19} |
treeview | 6 | {bio-phylogeny,bio} |
bio-tradis | 5 | {bio,bio-dev} |
getdata | 5 | {bio} |
ghmm | 5 | {bio} |
jebl2 | 5 | {bio-dev} |
- jellyfish1 | 5 | {bio} |
king | 5 | {typesetting,imaging} |
+ librg-utils-perl | 5 | {bio} |
obitools | 5 | {bio} |
- orthanc-mysql | 5 | {imaging} |
canu | 4 | {bio} |
dicompyler | 4 | {oncology} |
- elastix | 4 | {imaging} |
- embassy-domalign | 4 | {cloud,bio} |
+ jellyfish1 | 4 | {bio} |
lamarc | 4 | {bio} |
libdivsufsort | 4 | {bio-dev} |
libsbml | 4 | {bio-dev} |
@@ -66,9 +64,6 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000
rdp-alignment | 4 | {bio} |
runcircos-gui | 4 | {bio} |
saint | 4 | {bio} |
- staden | 4 | {bio} |
- tracetuner | 4 | {bio} |
- arden | 3 | {bio,cloud} |
bart-view | 3 | {imaging} |
beast-mcmc | 3 | {bio-phylogeny,bio} |
biomaj3-cli | 3 | {cloud} |
@@ -78,7 +73,9 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000
clonalframeml | 3 | {covid-19,bio} |
clonalorigin | 3 | {bio} |
delly | 3 | {covid-19,bio} |
+ elastix | 3 | {imaging} |
embassy-domainatrix | 3 | {bio,cloud} |
+ embassy-domalign | 3 | {cloud,bio} |
embassy-domsearch | 3 | {cloud,bio} |
fastml | 3 | {bio} |
gatb-core | 3 | {bio} |
@@ -99,8 +96,10 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000
sift | 3 | {bio} |
spread-phy | 3 | {bio-phylogeny,bio} |
stacks | 3 | {bio} |
- thesias | 3 | {bio,covid-19} |
+ staden | 3 | {bio} |
+ tracetuner | 3 | {bio} |
anfo | 2 | {cloud,bio} |
+ arden | 2 | {bio,cloud} |
assemblytics | 2 | {bio} |
cat-bat | 2 | {bio,covid-19} |
cmtk | 2 | {imaging} |
@@ -118,6 +117,7 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000
sprai | 2 | {bio} |
suitename | 2 | {bio} |
surankco | 2 | {bio} |
+ thesias | 2 | {bio,covid-19} |
trace2dbest | 2 | {bio} |
tvc | 2 | {bio} |
zalign | 2 | {cloud,bio} |
@@ -142,7 +142,6 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000
srf | 1 | {bio-dev} |
tophat-recondition | 1 | {bio,covid-19} |
varscan | 1 | {bio,covid-19} |
- vienna-rna | 1 | {covid-19,bio} |
acedb | 0 | {cloud,bio} |
bambamc | 0 | {bio-dev} |
biojava4-live | 0 | {bio-dev} |
@@ -193,8 +192,8 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000
orthanc-imagej | 0 | {imaging} |
parallel-fastq-dump | 0 | {covid-19} |
pbseqlib | 0 | {bio-dev} |
- python-seqcluster | 0 | {covid-19,bio-dev} |
python-seqcluster | 0 | {bio} |
+ python-seqcluster | 0 | {covid-19,bio-dev} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
shovill | 0 | {covid-19,bio} |
@@ -204,6 +203,7 @@ Last-Update: Wed, 02 Feb 2022 01:42:03 +0000
snpeff | 0 | {bio,covid-19} |
tipp | 0 | {bio,covid-19} |
varna | 0 | {bio} |
+ vienna-rna | 0 | {covid-19,bio} |
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
(234 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/46a1473d4f1ee37e410bcdfa2b1fb90fda22fb63
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/46a1473d4f1ee37e410bcdfa2b1fb90fda22fb63
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