[med-svn] [Git][med-team/hyphy][upstream] New upstream version 2.5.36+dfsg

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch upstream at Debian Med / hyphy


Commits:
5859d8f2 by Étienne Mollier at 2022-02-11T13:22:12+01:00
New upstream version 2.5.36+dfsg
- - - - -


30 changed files:

- + .travis.yml
- CMakeLists.txt
- res/TemplateBatchFiles/BGM.bf
- + res/TemplateBatchFiles/MSS-selector-2.bf
- + res/TemplateBatchFiles/MSS-selector.bf
- res/TemplateBatchFiles/SM-2019.bf
- res/TemplateBatchFiles/SelectionAnalyses/FEL.bf
- res/TemplateBatchFiles/SelectionAnalyses/RELAX.bf
- res/TemplateBatchFiles/SelectionAnalyses/aBSREL.bf
- res/TemplateBatchFiles/SelectionAnalyses/modules/shared-load-file.bf
- res/TemplateBatchFiles/TemplateModels/chooseGeneticCode.def
- res/TemplateBatchFiles/libv3/IOFunctions.bf
- res/TemplateBatchFiles/libv3/UtilityFunctions.bf
- res/TemplateBatchFiles/libv3/all-terms.bf
- res/TemplateBatchFiles/libv3/models/codon/MG_REV.bf
- res/TemplateBatchFiles/libv3/models/codon/MSS.bf
- res/TemplateBatchFiles/libv3/models/rate_variation.bf
- res/TemplateBatchFiles/libv3/tasks/alignments.bf
- res/TemplateBatchFiles/libv3/tasks/estimators.bf
- res/TemplateBatchFiles/libv3/tasks/trees.bf
- src/core/batchlan.cpp
- src/core/batchlan2.cpp
- src/core/batchlanruntime.cpp
- src/core/dataset.cpp
- src/core/dataset_filter.cpp
- src/core/fstring.cpp
- src/core/global_object_lists.cpp
- src/core/global_things.cpp
- src/core/hbl_env.cpp
- src/core/include/batchlan.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/commit/5859d8f2e7928cf6015b341902e4b6ff500be008

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View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/commit/5859d8f2e7928cf6015b341902e4b6ff500be008
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