[med-svn] [Git][med-team/gubbins][upstream] New upstream version 2.4.1

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / gubbins


Commits:
fed4523a by Andreas Tille at 2022-02-13T14:31:17+01:00
New upstream version 2.4.1
- - - - -


23 changed files:

- − .github/workflows/build.yml
- + .travis.yml
- CHANGELOG.md
- Dockerfile
- README.md
- VERSION
- configure.ac
- − environment.yml
- install_dependencies.sh
- + obsolete_changelog
- python/Makefile.am
- − python/VERSION
- python/gubbins/ValidateFastaAlignment.py
- python/gubbins/__init__.py
- python/gubbins/common.py
- − python/gubbins/pyjar.py
- − python/gubbins/run_gubbins.py
- − python/gubbins/tests/data/bootstrapping_test.aln
- python/gubbins/tests/data/non_bi_tree.tre.expected
- python/gubbins/tests/data/robinson_foulds_distance_tree1.tre.reroot_at_sequence_4_expected → python/gubbins/tests/data/robinson_foulds_distance_tree1.tre.reroot_at_sequence_4
- python/gubbins/tests/data/robinson_foulds_distance_tree1.tre.reroot_at_sequence_4_2_expected → python/gubbins/tests/data/robinson_foulds_distance_tree1.tre.reroot_at_sequence_4_2
- python/gubbins/tests/data/robinson_foulds_distance_tree1.tre.reroot_tree_at_midpoint_expected
- python/gubbins/tests/test_dependencies.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/gubbins/-/commit/fed4523a03b1fd2c7dfd4e2e4e66e902c7d76dc9

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View it on GitLab: https://salsa.debian.org/med-team/gubbins/-/commit/fed4523a03b1fd2c7dfd4e2e4e66e902c7d76dc9
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