[med-svn] [Git][med-team/parsnp][upstream] New upstream version 1.6.2+dfsg

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / parsnp


Commits:
032c9a74 by Andreas Tille at 2022-02-17T15:13:23+01:00
New upstream version 1.6.2+dfsg
- - - - -


2 changed files:

- + .travis.yml
- parsnp


Changes:

=====================================
.travis.yml
=====================================
@@ -0,0 +1,13 @@
+language: cpp
+compiler: 
+- gcc
+script: 
+- if [ $TRAVIS_OS_NAME == linux ]; then ./build_parsnp_linux.sh; fi 
+notifications:
+  email:
+    recipients:
+      - treangent at nbacc.net
+    on_success: change
+    on_failure: change
+os:
+- linux


=====================================
parsnp
=====================================
@@ -14,7 +14,7 @@ import signal
 import inspect
 from multiprocessing import *
 
-__version__ = "1.6.1"
+__version__ = "1.6.2"
 reroot_tree = True #use --midpoint-reroot
 
 try:
@@ -1508,8 +1508,8 @@ Please verify recruited genomes are all strain of interest""")
     if not VERBOSE and os.path.exists("%s/tmp"%(outputDir)):
         shutil.rmtree("%s/tmp"%(outputDir))
 
-    if os.path.exists("%s/parsnp.snps.mblocks"%(outputDir)):
-        os.remove("%s/parsnp.snps.mblocks"%(outputDir))
+    # if os.path.exists("%s/parsnp.snps.mblocks"%(outputDir)):
+        # os.remove("%s/parsnp.snps.mblocks"%(outputDir))
     if os.path.exists("%s/parsnp.snps.mblocks.reduced"%(outputDir)):
         os.remove("%s/parsnp.snps.mblocks.reduced"%(outputDir))
 



View it on GitLab: https://salsa.debian.org/med-team/parsnp/-/commit/032c9a745b587b2b465fa1d1789d12d80c5ea518

-- 
View it on GitLab: https://salsa.debian.org/med-team/parsnp/-/commit/032c9a745b587b2b465fa1d1789d12d80c5ea518
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