[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Mon Jan 3 13:42:27 GMT 2022



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
446255a1 by Andreas Tille at 2022-01-03T13:42:22+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,20 +1,20 @@
-Last-Update: Mon, 03 Jan 2022 01:42:03 +0000
+Last-Update: Mon, 03 Jan 2022 13:42:04 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    174 | {imaging,covid-19}                                  | 
+ dcmtk                         |    172 | {imaging,covid-19}                                  | 
  orthanc                       |    104 | {covid-19,imaging,practice}                         | 
  orthanc-wsi                   |     53 | {oncology,laboratory,practice,his,covid-19,imaging} | 
- htsjdk                        |     30 | {bio-dev}                                           | 
+ htsjdk                        |     31 | {bio-dev}                                           | 
  dicom3tools                   |     26 | {imaging}                                           | 
  amide                         |     24 | {imaging}                                           | 
  dcm2niix                      |     22 | {imaging}                                           | 
  dicomscope                    |     22 | {imaging}                                           | 
- orthanc-webviewer             |     16 | {imaging}                                           | 
+ orthanc-webviewer             |     17 | {imaging}                                           | 
  gdcm                          |     15 | {covid-19,imaging}                                  | 
  gnumed-server                 |     15 | {covid-19,practice}                                 | 
+ ngs-sdk                       |     15 | {bio-dev}                                           | 
  minc-tools                    |     14 | {imaging}                                           | 
- ngs-sdk                       |     14 | {bio-dev}                                           | 
  adun.app                      |     13 | {bio}                                               | 
  insighttoolkit4               |     13 | {imaging-dev}                                       | 
  pixelmed                      |     13 | {imaging}                                           | 
@@ -25,24 +25,23 @@ Last-Update: Mon, 03 Jan 2022 01:42:03 +0000
  libminc                       |      9 | {imaging-dev}                                       | 
  nifticlib                     |      9 | {imaging}                                           | 
  jebl2                         |      8 | {bio-dev}                                           | 
+ king                          |      8 | {typesetting,imaging}                               | 
  mia                           |      8 | {imaging}                                           | 
  nifticlib                     |      8 | {imaging-dev}                                       | 
  plastimatch                   |      8 | {imaging}                                           | 
  biojava-live                  |      7 | {bio-dev}                                           | 
- king                          |      7 | {typesetting,imaging}                               | 
- lagan                         |      7 | {bio}                                               | 
  mrtrix3                       |      7 | {imaging}                                           | 
  ngs-sdk                       |      7 | {bio-dev}                                           | 
+ lagan                         |      6 | {bio}                                               | 
  librg-utils-perl              |      6 | {bio}                                               | 
- ngs-sdk                       |      6 | {bio-dev}                                           | 
  nifti2dicom                   |      6 | {imaging}                                           | 
  nipype                        |      6 | {imaging,imaging-dev}                               | 
+ openslide                     |      6 | {imaging-dev}                                       | 
  orthanc-dicomweb              |      6 | {imaging,covid-19}                                  | 
  orthanc-postgresql            |      6 | {imaging}                                           | 
  salmon                        |      6 | {covid-19,bio}                                      | 
  beast-mcmc                    |      5 | {bio-phylogeny,bio}                                 | 
  libdivsufsort                 |      5 | {bio-dev}                                           | 
- openslide                     |      5 | {imaging-dev}                                       | 
  bio-tradis                    |      4 | {bio-dev,bio}                                       | 
  bitseq                        |      4 | {bio}                                               | 
  brig                          |      4 | {bio}                                               | 
@@ -69,7 +68,6 @@ Last-Update: Mon, 03 Jan 2022 01:42:03 +0000
  librdp-taxonomy-tree-java     |      3 | {bio-dev}                                           | 
  melting                       |      3 | {bio,cloud}                                         | 
  mhap                          |      3 | {bio,bio-ngs}                                       | 
- orthanc-mysql                 |      3 | {imaging}                                           | 
  orthanc-python                |      3 | {covid-19}                                          | 
  pigx-rnaseq                   |      3 | {bio,covid-19}                                      | 
  piler                         |      3 | {bio}                                               | 
@@ -79,6 +77,7 @@ Last-Update: Mon, 03 Jan 2022 01:42:03 +0000
  sibsim4                       |      3 | {bio,cloud}                                         | 
  spread-phy                    |      3 | {bio,bio-phylogeny}                                 | 
  stacks                        |      3 | {bio}                                               | 
+ staden                        |      3 | {bio}                                               | 
  treeview                      |      3 | {bio,bio-phylogeny}                                 | 
  tvc                           |      3 | {bio}                                               | 
  zalign                        |      3 | {bio,cloud}                                         | 
@@ -98,6 +97,7 @@ Last-Update: Mon, 03 Jan 2022 01:42:03 +0000
  libpal-java                   |      2 | {bio-dev}                                           | 
  mauve-aligner                 |      2 | {bio}                                               | 
  orthanc-gdcm                  |      2 | {imaging}                                           | 
+ orthanc-mysql                 |      2 | {imaging}                                           | 
  papyrus                       |      2 | {imaging-dev}                                       | 
  phyutility                    |      2 | {bio,cloud}                                         | 
  pique                         |      2 | {bio}                                               | 
@@ -118,7 +118,6 @@ Last-Update: Mon, 03 Jan 2022 01:42:03 +0000
  soapsnp                       |      2 | {bio}                                               | 
  spaln                         |      2 | {bio,covid-19}                                      | 
  sprai                         |      2 | {bio}                                               | 
- staden                        |      2 | {bio}                                               | 
  suitename                     |      2 | {bio}                                               | 
  surankco                      |      2 | {bio}                                               | 
  thesias                       |      2 | {covid-19,bio}                                      | 
@@ -192,8 +191,8 @@ Last-Update: Mon, 03 Jan 2022 01:42:03 +0000
  parallel-fastq-dump           |      0 | {covid-19}                                          | 
  pbcopper                      |      0 | {bio-dev}                                           | 
  pbseqlib                      |      0 | {bio-dev}                                           | 
- python-seqcluster             |      0 | {bio}                                               | 
  python-seqcluster             |      0 | {bio-dev,covid-19}                                  | 
+ python-seqcluster             |      0 | {bio}                                               | 
  resfinder-db                  |      0 | {bio}                                               | 
  sbmltoolbox                   |      0 | {bio-dev}                                           | 
  seq-gen                       |      0 | {bio}                                               | 
@@ -206,5 +205,5 @@ Last-Update: Mon, 03 Jan 2022 01:42:03 +0000
  mssstest                      |     -1 | {tools}                                             | 
  sight                         |     -1 | {imaging-dev}                                       | 
  tipp                          |     -1 | {bio,covid-19}                                      | 
-(234 rows)
+(233 rows)
 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/446255a1c6e8b80ae02e502a9bfefc77bddbbb72

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/446255a1c6e8b80ae02e502a9bfefc77bddbbb72
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