Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
f9fb6f80 by Andreas Tille at 2022-01-05T13:42:19+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,27 +1,27 @@
-Last-Update: Wed, 05 Jan 2022 01:42:03 +0000
+Last-Update: Wed, 05 Jan 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 176 | {imaging,covid-19} |
- orthanc | 107 | {covid-19,imaging,practice} |
+ dcmtk | 182 | {imaging,covid-19} |
+ orthanc | 108 | {covid-19,imaging,practice} |
orthanc-wsi | 54 | {oncology,laboratory,practice,his,covid-19,imaging} |
htsjdk | 30 | {bio-dev} |
- dicom3tools | 26 | {imaging} |
- amide | 23 | {imaging} |
- dicomscope | 22 | {imaging} |
- dcm2niix | 21 | {imaging} |
+ dicom3tools | 27 | {imaging} |
+ amide | 24 | {imaging} |
+ dicomscope | 24 | {imaging} |
+ dcm2niix | 22 | {imaging} |
orthanc-webviewer | 17 | {imaging} |
- gdcm | 15 | {covid-19,imaging} |
+ gdcm | 16 | {covid-19,imaging} |
gnumed-server | 15 | {covid-19,practice} |
minc-tools | 14 | {imaging} |
- ngs-sdk | 14 | {bio-dev} |
adun.app | 13 | {bio} |
- pixelmed | 13 | {imaging} |
+ ngs-sdk | 13 | {bio-dev} |
+ openslide | 13 | {imaging} |
insighttoolkit4 | 12 | {imaging-dev} |
- openslide | 12 | {imaging} |
+ invesalius | 12 | {imaging} |
+ pixelmed | 12 | {imaging} |
dicomnifti | 11 | {imaging} |
- invesalius | 11 | {imaging} |
- gdcm | 10 | {imaging-dev} |
+ gdcm | 11 | {imaging-dev} |
libminc | 9 | {imaging-dev} |
nifticlib | 9 | {imaging} |
jebl2 | 8 | {bio-dev} |
@@ -33,7 +33,6 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000
mrtrix3 | 7 | {imaging} |
ngs-sdk | 7 | {bio-dev} |
lagan | 6 | {bio} |
- librg-utils-perl | 6 | {bio} |
nifti2dicom | 6 | {imaging} |
nipype | 6 | {imaging,imaging-dev} |
openslide | 6 | {imaging-dev} |
@@ -42,21 +41,20 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000
salmon | 6 | {covid-19,bio} |
beast-mcmc | 5 | {bio-phylogeny,bio} |
libdivsufsort | 5 | {bio-dev} |
+ librg-utils-perl | 5 | {bio} |
+ nifti2dicom | 5 | {imaging} |
obitools | 5 | {bio} |
bio-tradis | 4 | {bio-dev,bio} |
bitseq | 4 | {bio} |
brig | 4 | {bio} |
embassy-domainatrix | 4 | {bio,cloud} |
embassy-domalign | 4 | {cloud,bio} |
- nifti2dicom | 4 | {imaging} |
oscar | 4 | {data,tools,practice} |
tracetuner | 4 | {bio} |
anfo | 3 | {bio,cloud} |
arden | 3 | {cloud,bio} |
assemblytics | 3 | {bio} |
- atropos | 3 | {bio} |
bart-view | 3 | {imaging} |
- biomaj3-cli | 3 | {cloud} |
canu | 3 | {bio} |
cat-bat | 3 | {bio,covid-19} |
clonalorigin | 3 | {bio} |
@@ -83,6 +81,8 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000
treeview | 3 | {bio,bio-phylogeny} |
tvc | 3 | {bio} |
zalign | 3 | {bio,cloud} |
+ atropos | 2 | {bio} |
+ biomaj3-cli | 2 | {cloud} |
blimps | 2 | {bio} |
clonalframeml | 2 | {covid-19,bio} |
delly | 2 | {bio,covid-19} |
@@ -96,14 +96,12 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000
lamarc | 2 | {bio} |
libpal-java | 2 | {bio-dev} |
mauve-aligner | 2 | {bio} |
- microbegps | 2 | {bio} |
orthanc-gdcm | 2 | {imaging} |
orthanc-mysql | 2 | {imaging} |
papyrus | 2 | {imaging-dev} |
phyutility | 2 | {bio,cloud} |
pique | 2 | {bio} |
placnet | 2 | {bio} |
- plasmidid | 2 | {covid-19,bio} |
plasmidseeker | 2 | {bio} |
pplacer | 2 | {covid-19,bio,bio-phylogeny} |
proalign | 2 | {bio-phylogeny,bio} |
@@ -132,11 +130,12 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000
emboss-explorer | 1 | {bio} |
getdata | 1 | {bio} |
libbio-mage-utils-perl | 1 | {bio-dev} |
- libchado-perl | 1 | {bio-dev} |
libctapimkt | 1 | {practice} |
libsbml | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
metaphlan2 | 1 | {bio} |
+ microbegps | 1 | {bio} |
+ plasmidid | 1 | {covid-19,bio} |
python-wdlparse | 1 | {bio-dev} |
shovill | 1 | {covid-19,bio} |
varscan | 1 | {bio,covid-19} |
@@ -163,6 +162,7 @@ Last-Update: Wed, 05 Jan 2022 01:42:03 +0000
libbpp-raa | 0 | {bio-dev} |
libbpp-seq | 0 | {bio-dev} |
libbpp-seq-omics | 0 | {bio-dev} |
+ libchado-perl | 0 | {bio-dev} |
libgenome | 0 | {bio-dev} |
libgkarrays | 0 | {bio-dev} |
libhmsbeagle | 0 | {bio-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f9fb6f80a9b498bb29927a290fe77e3d5c29295b
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f9fb6f80a9b498bb29927a290fe77e3d5c29295b
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